Homology
BLAST of mRNA_Ecto-sp13_S_contig9929.21576.1 vs. uniprot
Match:
D7FXN9_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN9_ECTSI)
HSP 1 Score: 61.6 bits (148), Expect = 1.090e-8
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 3
Query: 249 MRSYRRWEVPQGPSCTGTGSQSPSAVLNRPNGAD 350
MRS+R WEVPQ PSCTGTGSQSPSAVLN P+GAD
Sbjct: 1 MRSHRGWEVPQSPSCTGTGSQSPSAVLNGPSGAD 34
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9929.21576.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 1
0 1 Expect = 1.09e-8 / Id = 85.29 Sequence D7FXN9_ECTSI
Match Name E-value Identity Description
D7FXN9_ECTSI 1.090e-8 85.29 Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 0 Start 1 Seed ortholog score 63.2 Seed ortholog evalue 2.8e-08 Seed eggNOG ortholog 2880.D7FXN9 Preferred name EXTL1 Model size 352 KEGG ko ko:K02366,ko:K02368,ko:K21988 KEGG TC 1.A.17.4 KEGG Reaction R05935,R05936,R10138,R10139 KEGG Pathway ko00534,ko01100,map00534,map01100 KEGG Module M00059 Hectar predicted targeting category no signal peptide or anchor GOs GO:0000003,GO:0000139,GO:0000271,GO:0000902,GO:0000904,GO:0001501,GO:0001503,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006040,GO:0006044,GO:0006082,GO:0006790,GO:0006807,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007492,GO:0007498,GO:0008150,GO:0008152,GO:0008194,GO:0008354,GO:0008375,GO:0008589,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0012505,GO:0015012,GO:0015014,GO:0015020,GO:0016020,GO:0016021,GO:0016043,GO:0016051,GO:0016192,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019899,GO:0019953,GO:0021537,GO:0021772,GO:0021988,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030111,GO:0030154,GO:0030166,GO:0030176,GO:0030177,GO:0030182,GO:0030201,GO:0030202,GO:0030203,GO:0030210,GO:0030900,GO:0030968,GO:0031090,GO:0031175,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033554,GO:0033692,GO:0034620,GO:0034637,GO:0034645,GO:0034976,GO:0035295,GO:0035966,GO:0035967,GO:0036465,GO:0036498,GO:0040011,GO:0042175,GO:0042221,GO:0042328,GO:0042330,GO:0042802,GO:0042803,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045880,GO:0046982,GO:0046983,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048513,GO:0048518,GO:0048522,GO:0048565,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048706,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050508,GO:0050509,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0055123,GO:0060322,GO:0060465,GO:0060828,GO:0061564,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0072498,GO:0090092,GO:0090097,GO:0090098,GO:0090100,GO:0090263,GO:0097485,GO:0098588,GO:0098657,GO:0098791,GO:0098827,GO:0099003,GO:0099504,GO:0120036,GO:0120039,GO:1901071,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510 Exons 1 EggNOG free text desc. macromolecule glycosylation EggNOG OGs KOG1021@1,KOG1021@2759 Ec32 ortholog description Glycosyltransferase, family GT47 Ec32 ortholog Ec-07_000650.3 EC 2.4.1.224,2.4.1.225 Cds size 102 COG Functional cat. S CAZy GT47,GT64 Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00002,ko01000,ko01003,ko02000
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681464253.467216-UTR-Ecto-sp13_S_contig9929:1019..1267 1681464253.467216-UTR-Ecto-sp13_S_contig9929:1019..1267 Ectocarpus species13 EcNAP12_S_4_19m UTR Ecto-sp13_S_contig9929 1020..1267 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681464253.4856415-CDS-Ecto-sp13_S_contig9929:1267..1369 1681464253.4856415-CDS-Ecto-sp13_S_contig9929:1267..1369 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9929 1268..1369 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9929.21576.1
>prot_Ecto-sp13_S_contig9929.21576.1 ID=prot_Ecto-sp13_S_contig9929.21576.1|Name=mRNA_Ecto-sp13_S_contig9929.21576.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=34bp
MRSYRRWEVPQGPSCTGTGSQSPSAVLNRPNGAD back to top mRNA from alignment at Ecto-sp13_S_contig9929:1020..1369+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9929.21576.1 ID=mRNA_Ecto-sp13_S_contig9929.21576.1|Name=mRNA_Ecto-sp13_S_contig9929.21576.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=350bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9929:1020..1369+ (Ectocarpus species13 EcNAP12_S_4_19m)AGAACACGGAGAAGGGATACCTGTCCGCCCCCCGGTGTGCACGTCAGTTA
ATCAGGTGTGCGGAGATTTCTGGTTGGACGCACTTGTTGCTGCTCAGTGC
GGTCGTAAGCATGGTAACTGGATGACGTGACCGCTCCAACAGGACAGCGA
GAGTGCGGGTTCCACATCAGCAAGCTGTATCGGCCCAACAGCCTGACGGC
CATCACTGTTGTAGCAACAGCAGGAGCAACAACAAACCCTCGCGCAAA AT
GAGGAGTTATCGAAGATGGGAAGTTCCTCAGGGCCCATCCTGCACGGGGA
CAGGGAGCCAGTCGCCCTCAGCTGTATTGAACAGACCGAACGGGGCAGAC
back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9929:1020..1369+
>mRNA_Ecto-sp13_S_contig9929.21576.1 ID=mRNA_Ecto-sp13_S_contig9929.21576.1|Name=mRNA_Ecto-sp13_S_contig9929.21576.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=102bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9929:1020..1369+ (Ectocarpus species13 EcNAP12_S_4_19m) back to top