prot_Ecto-sp13_S_contig9912.21558.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9912.21558.1
Unique Nameprot_Ecto-sp13_S_contig9912.21558.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length196
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9912.21558.1 vs. uniprot
Match: A0A6H5JTZ0_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ0_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 3.320e-49
Identity = 90/93 (96.77%), Postives = 90/93 (96.77%), Query Frame = 0 
Query:    1 LKRSKSQVAQTIVADHVQRLLGLNGVELPEDEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRDGKGLRGGPPGHPMHGHGHGPGGRF 93
            LKRSKSQVA TIVADHVQRLLGLNGVELPEDEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRD KG RGGPPGHPMHGHGHGPGGRF
Sbjct:  262 LKRSKSQVAGTIVADHVQRLLGLNGVELPEDEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRDAKGPRGGPPGHPMHGHGHGPGGRF 354
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BLAST of mRNA_Ecto-sp13_S_contig9912.21558.1 vs. uniprot
Match: D8LFK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK7_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 5.670e-47
Identity = 87/94 (92.55%), Postives = 88/94 (93.62%), Query Frame = 0 
Query:    1 LKRSKSQVAQTIVADHVQRLLGLNGVELPEDEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRDGKGLRGGPPGHPMHGHGHGPGGRFG 94
            LKRSKSQVA+TIVADHVQRLL LNGVELP DEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRDGKG RGGPPGHPMHGH   PGGRFG
Sbjct:  237 LKRSKSQVARTIVADHVQRLLILNGVELPGDEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRDGKGPRGGPPGHPMHGHXXXPGGRFG 330
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9912.21558.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTZ0_9PHAE3.320e-4996.77PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LFK7_ECTSI5.670e-4792.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9912contigEcto-sp13_S_contig9912:5514..6101 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9912.21558.1mRNA_Ecto-sp13_S_contig9912.21558.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9912 5512..6101 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9912.21558.1 ID=prot_Ecto-sp13_S_contig9912.21558.1|Name=mRNA_Ecto-sp13_S_contig9912.21558.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=196bp
LKRSKSQVAQTIVADHVQRLLGLNGVELPEDEVQPLLQALRVRSRRLVRL
GLLGPEFLEDMPDGHYHRDGKGLRGGPPGHPMHGHGHGPGGRFGGGGGGG
GGGSRGGGPLPGRGGGAPPMMPFHSPPPFHYQGGGFSGPHGGGGAEGAAH
RSPPRRGPPPPHMMGMGMGGPPMEPSHDHHHQRGGGRHPPPPHMRG
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