prot_Ecto-sp13_S_contig99.21543.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig99.21543.1
Unique Nameprot_Ecto-sp13_S_contig99.21543.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length62
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig99.21543.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 7.450e-7
Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 0 
Query:    1 MERDIGSGTARPDKWASVVTSGDAVKLAELVLLSSGS 37
            ME D+GSG+A PDKW   V +GDA KLAELVL+ SGS
Sbjct:   56 MEGDVGSGSASPDKWGLAVATGDATKLAELVLVWSGS 92
[Close]
BLAST of mRNA_Ecto-sp13_S_contig99.21543.1 vs. uniprot
Match: D7FH80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH80_ECTSI)

HSP 1 Score: 48.9 bits (115), Expect = 4.450e-6
Identity = 24/36 (66.67%), Postives = 26/36 (72.22%), Query Frame = 0 
Query:    1 MERDIGSGTARPDKWASVVTSGDAVKLAELVLLSSG 36
            ME   GS +ARPD+W   V SGDA KLAELVLL SG
Sbjct:    1 MEGRAGSSSARPDEWGPAVASGDATKLAELVLLWSG 36
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig99.21543.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KPY7_9PHAE7.450e-767.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH80_ECTSI4.450e-666.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig99contigEcto-sp13_S_contig99:32372..33878 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig99.21543.1mRNA_Ecto-sp13_S_contig99.21543.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig99 32100..33909 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig99.21543.1 ID=prot_Ecto-sp13_S_contig99.21543.1|Name=mRNA_Ecto-sp13_S_contig99.21543.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=62bp
MERDIGSGTARPDKWASVVTSGDAVKLAELVLLSSGSSLRLFAGDEACIF
NPGFFSVAPDT*
back to top