prot_Ecto-sp13_S_contig98955.21538.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig98955.21538.1
Unique Nameprot_Ecto-sp13_S_contig98955.21538.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length148
Homology
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: Q8QN66_ESV1K (EsV-1-224 n=2 Tax=root TaxID=1 RepID=Q8QN66_ESV1K)

HSP 1 Score: 277 bits (708), Expect = 1.870e-91
Identity = 139/148 (93.92%), Postives = 143/148 (96.62%), Query Frame = 0
Query:    1 MVSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSVSDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRLSS 148
            MVSWTEKHRPTRLQDVSGND VIRALQSF SME TPN+ILHGPPGSGKTSSI+SMAKSFFG TNIS MTLELNAGDSRSIGTMRDQIHFFTRCSSV+DRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYI+RLSS
Sbjct:    1 MVSWTEKHRPTRLQDVSGNDHVIRALQSFTSMETTPNMILHGPPGSGKTSSIISMAKSFFGRTNISIMTLELNAGDSRSIGTMRDQIHFFTRCSSVTDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYISRLSS 148          
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: A0A6H5KU33_9PHAE (MEP9 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU33_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 7.480e-89
Identity = 144/148 (97.30%), Postives = 147/148 (99.32%), Query Frame = 0
Query:    1 MVSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSVSDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRLSS 148
            MVSWTEKHRPTRLQDVSGNDQVIRALQ+FKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQI+FFTRCSSVSD+STNALKLVILDEADGLTSCAQRALRHLIETT GRARFCLCCNYINRLSS
Sbjct:    1 MVSWTEKHRPTRLQDVSGNDQVIRALQTFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQINFFTRCSSVSDKSTNALKLVILDEADGLTSCAQRALRHLIETTCGRARFCLCCNYINRLSS 148          
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: A0A068Y7N1_ECHMU (Replication factor C subunit 5 n=3 Tax=Echinococcus TaxID=6209 RepID=A0A068Y7N1_ECHMU)

HSP 1 Score: 134 bits (337), Expect = 1.550e-35
Identity = 68/146 (46.58%), Postives = 97/146 (66.44%), Query Frame = 0
Query:    2 VSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSVSDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRLS 147
            + W EK+RP  L D+ G++ +I  ++ F +    P+L+ +GPPG+GKTS+ILS+AK  FG T  S+M LELNA D R IG +R+Q+  F   +S     +   KL+ILDEAD +T  AQ ALR +IE  S  ARFCL CNY+++++
Sbjct:    5 LPWIEKYRPESLDDLIGHELIITTIRRFLNQGKLPHLLFYGPPGTGKTSTILSVAKHLFGPTEFSSMVLELNASDDRGIGVVREQVLTF---ASTKTLFSGKFKLIILDEADAMTKDAQNALRRIIEKFSENARFCLICNYLSKIT 147          
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: C1HCF9_PARBA (Replication factor C subunit 3 n=4 Tax=Paracoccidioides TaxID=38946 RepID=C1HCF9_PARBA)

HSP 1 Score: 134 bits (338), Expect = 4.890e-35
Identity = 69/154 (44.81%), Postives = 97/154 (62.99%), Query Frame = 0
Query:    2 VSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSV--------SDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRLS 147
            + W EK+RP  L+DVSG+  VI  + +F      P+L+L+GPPG+GKTS+IL++A+  +G  N+  M LELNA D R I  +RDQI  F     +        S+ S  A KL+ILDEAD +T+ AQ ALR ++E  +  ARFC+  NY ++LS
Sbjct:   45 MPWVEKYRPNSLEDVSGHHDVIGTINTFIDSNRLPHLLLYGPPGTGKTSTILALARRIYGAKNMRQMVLELNASDDRGIDVVRDQIKTFASTKQIFSVAPVAKSESSLGAFKLIILDEADAMTATAQMALRRIMEKYTANARFCIIANYTHKLS 198          
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: T5AR03_OPHSC (Activator 1 subunit 3 n=2 Tax=Ophiocordyceps sinensis TaxID=72228 RepID=T5AR03_OPHSC)

HSP 1 Score: 132 bits (333), Expect = 1.900e-34
Identity = 65/150 (43.33%), Postives = 96/150 (64.00%), Query Frame = 0
Query:    2 VSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSVSDRSTN----ALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRLS 147
            + W EK+RP  L DVSG+ +++  +  F      P+L+L+GPPG+GKTS+IL++A+  +G +N+  M LELNA D R I  +R+QI  F     +    T+    A KL+ILDEAD +T+ AQ ALR ++E  +  ARFC+  NY ++LS
Sbjct:   44 LPWVEKYRPATLDDVSGHQEILATINKFVDSNRLPHLLLYGPPGTGKTSTILALARRIYGASNLRQMVLELNASDDRGIDVVREQIKTFASTKQIFSMGTSVKGAAFKLIILDEADAMTNTAQMALRRVMEKYTANARFCIIANYSHKLS 193          
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: A0A1J9PYA3_9EURO (AAA domain-containing protein n=10 Tax=Ajellomycetaceae TaxID=299071 RepID=A0A1J9PYA3_9EURO)

HSP 1 Score: 132 bits (332), Expect = 3.010e-34
Identity = 67/154 (43.51%), Postives = 96/154 (62.34%), Query Frame = 0
Query:    2 VSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSV--------SDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRLS 147
            + W EK+RP  L+DVSG+  +I  +  F      P+L+L+GPPG+GKTS+IL++A+  +G  N+  M LELNA D R I  +RDQI  F     +        +D +  A KL+ILDEAD +T+ AQ ALR ++E  +  ARFC+  NY ++LS
Sbjct:   45 LPWVEKYRPNTLEDVSGHQDIIGTINKFIDTNRLPHLLLYGPPGTGKTSTILALARRIYGVKNMRQMVLELNASDDRGIDVVRDQIKTFASTKQIFSMAPAAKADSTLGAFKLIILDEADAMTAVAQMALRRIMEKYTANARFCIIANYTHKLS 198          
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: K3VPE0_FUSPC (AAA domain-containing protein n=30 Tax=Fusarium TaxID=5506 RepID=K3VPE0_FUSPC)

HSP 1 Score: 131 bits (330), Expect = 5.710e-34
Identity = 68/154 (44.16%), Postives = 97/154 (62.99%), Query Frame = 0
Query:    2 VSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSV-----SDRSTNAL---KLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRLS 147
            + W EK+RPT L DVSG+  ++  +  F      P+L+L+GPPG+GKTS+IL++A+  +G  N+  M LELNA D R I  +R+QI  F     +     + RS NA+   KL+ILDEAD +TS AQ ALR ++E  +   RFC+  NY ++LS
Sbjct:   42 LPWVEKYRPTTLDDVSGHQDILATINKFIEQNRLPHLLLYGPPGTGKTSTILALARRIYGAANMRQMVLELNASDDRGIDVVREQIKTFASTKQIFSLGGASRSGNAMAGFKLIILDEADAMTSTAQMALRRIMEKYTTNTRFCIIANYSHKLS 195          
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: A0A8H4S8Y2_9EURO (AAA domain-containing protein n=1 Tax=Penicillium sp. str. #12 TaxID=2720512 RepID=A0A8H4S8Y2_9EURO)

HSP 1 Score: 127 bits (319), Expect = 6.420e-34
Identity = 64/146 (43.84%), Postives = 93/146 (63.70%), Query Frame = 0
Query:    2 VSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSVSDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRLS 147
            + W EK+RP+ L DVSG+  ++  +  F      P+L+L+GPPG+GKTS+IL++A+  +G  N+  M LELNA D R I  +R+QI  F   +S +       KL+ILDEAD +TS AQ ALR ++E  +   RFC+  NY ++LS
Sbjct:   40 LPWVEKYRPSSLDDVSGHQDILATINRFVETNRLPHLLLYGPPGTGKTSTILALARRIYGTKNMRQMVLELNASDDRGIDVVREQIKTF---ASTAGSPLAGFKLIILDEADAMTSTAQMALRRIMERYTANTRFCVIANYTHKLS 182          
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: A0A448ZS34_9STRA (AAA domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZS34_9STRA)

HSP 1 Score: 130 bits (328), Expect = 6.440e-34
Identity = 64/145 (44.14%), Postives = 100/145 (68.97%), Query Frame = 0
Query:    2 VSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSVSDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRL 146
            + W EK+RP RL+D+  +++++  + +    +  P+L+L+GPPG+GKTS+I++ AK  +G +  S+MTLELNA D+R IG +R++I  F     +  R    +KL+ILDEAD +TS AQ ALR +IE  +  ARFCL CNY++++
Sbjct:   13 LPWVEKYRPERLEDLVAHEKIVNIITTMIDNDNLPHLLLYGPPGTGKTSTIVAAAKRMYGASKYSSMTLELNASDARGIGVVRNEIKEFAGTQQLFSRG---VKLIILDEADAMTSDAQFALRRVIEKYTKNARFCLICNYVSKI 154          
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: A0A1L9SDK8_9EURO (AAA domain-containing protein n=1 Tax=Penicilliopsis zonata CBS 506.65 TaxID=1073090 RepID=A0A1L9SDK8_9EURO)

HSP 1 Score: 131 bits (329), Expect = 8.420e-34
Identity = 66/155 (42.58%), Postives = 94/155 (60.65%), Query Frame = 0
Query:    2 VSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSV---------SDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRLS 147
            + W EK+RP  L DVSG+  ++  +  F      P+L+L+GPPG+GKTS+IL++A+  +GG N+  M LELNA D R I  +R+QI  F     +         +  S  A KL+ILDEAD +TS AQ ALR ++E  +   RFC+  NY ++LS
Sbjct:   44 LPWVEKYRPNTLDDVSGHQDILATINKFIDANRLPHLLLYGPPGTGKTSTILALARRIYGGKNMRQMVLELNASDDRGIDVVREQIKTFASTKQIFSMAPSTTANSSSLGAFKLIILDEADAMTSTAQMALRRIMEKYTANTRFCIIANYTHKLS 198          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QN66_ESV1K1.870e-9193.92EsV-1-224 n=2 Tax=root TaxID=1 RepID=Q8QN66_ESV1K[more]
A0A6H5KU33_9PHAE7.480e-8997.30MEP9 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A068Y7N1_ECHMU1.550e-3546.58Replication factor C subunit 5 n=3 Tax=Echinococcu... [more]
C1HCF9_PARBA4.890e-3544.81Replication factor C subunit 3 n=4 Tax=Paracoccidi... [more]
T5AR03_OPHSC1.900e-3443.33Activator 1 subunit 3 n=2 Tax=Ophiocordyceps sinen... [more]
A0A1J9PYA3_9EURO3.010e-3443.51AAA domain-containing protein n=10 Tax=Ajellomycet... [more]
K3VPE0_FUSPC5.710e-3444.16AAA domain-containing protein n=30 Tax=Fusarium Ta... [more]
A0A8H4S8Y2_9EURO6.420e-3443.84AAA domain-containing protein n=1 Tax=Penicillium ... [more]
A0A448ZS34_9STRA6.440e-3444.14AAA domain-containing protein n=2 Tax=Pseudo-nitzs... [more]
A0A1L9SDK8_9EURO8.420e-3442.58AAA domain-containing protein n=1 Tax=Penicilliops... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..148
e-value: 1.5E-33
score: 118.0
NoneNo IPR availablePANTHERPTHR11669:SF5REPLICATION FACTOR C SUBUNIT 2coord: 2..146
NoneNo IPR availablePANTHERPTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITcoord: 2..146
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 38..146
e-value: 1.2E-8
score: 35.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig98955contigEcto-sp13_S_contig98955:2..445 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig98955.21538.1mRNA_Ecto-sp13_S_contig98955.21538.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig98955 2..445 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig98955.21538.1 ID=prot_Ecto-sp13_S_contig98955.21538.1|Name=mRNA_Ecto-sp13_S_contig98955.21538.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp
MVSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTS
SILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSVSDRS
TNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRLSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase