mRNA_Ecto-sp13_S_contig98955.21538.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: Q8QN66_ESV1K (EsV-1-224 n=2 Tax=root TaxID=1 RepID=Q8QN66_ESV1K) HSP 1 Score: 277 bits (708), Expect = 1.870e-91 Identity = 139/148 (93.92%), Postives = 143/148 (96.62%), Query Frame = 1 Query: 1 MVSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSVSDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRLSS 444 MVSWTEKHRPTRLQDVSGND VIRALQSF SME TPN+ILHGPPGSGKTSSI+SMAKSFFG TNIS MTLELNAGDSRSIGTMRDQIHFFTRCSSV+DRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYI+RLSS Sbjct: 1 MVSWTEKHRPTRLQDVSGNDHVIRALQSFTSMETTPNMILHGPPGSGKTSSIISMAKSFFGRTNISIMTLELNAGDSRSIGTMRDQIHFFTRCSSVTDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYISRLSS 148
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: A0A6H5KU33_9PHAE (MEP9 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU33_9PHAE) HSP 1 Score: 286 bits (731), Expect = 7.480e-89 Identity = 144/148 (97.30%), Postives = 147/148 (99.32%), Query Frame = 1 Query: 1 MVSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSVSDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRLSS 444 MVSWTEKHRPTRLQDVSGNDQVIRALQ+FKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQI+FFTRCSSVSD+STNALKLVILDEADGLTSCAQRALRHLIETT GRARFCLCCNYINRLSS Sbjct: 1 MVSWTEKHRPTRLQDVSGNDQVIRALQTFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQINFFTRCSSVSDKSTNALKLVILDEADGLTSCAQRALRHLIETTCGRARFCLCCNYINRLSS 148
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: K3VPE0_FUSPC (AAA domain-containing protein n=30 Tax=Fusarium TaxID=5506 RepID=K3VPE0_FUSPC) HSP 1 Score: 131 bits (330), Expect = 5.710e-34 Identity = 68/154 (44.16%), Postives = 97/154 (62.99%), Query Frame = 1 Query: 4 VSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSV-----SDRSTNAL---KLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRLS 441 + W EK+RPT L DVSG+ ++ + F P+L+L+GPPG+GKTS+IL++A+ +G N+ M LELNA D R I +R+QI F + + RS NA+ KL+ILDEAD +TS AQ ALR ++E + RFC+ NY ++LS Sbjct: 42 LPWVEKYRPTTLDDVSGHQDILATINKFIEQNRLPHLLLYGPPGTGKTSTILALARRIYGAANMRQMVLELNASDDRGIDVVREQIKTFASTKQIFSLGGASRSGNAMAGFKLIILDEADAMTSTAQMALRRIMEKYTTNTRFCIIANYSHKLS 195
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: A0A8H4S8Y2_9EURO (AAA domain-containing protein n=1 Tax=Penicillium sp. str. #12 TaxID=2720512 RepID=A0A8H4S8Y2_9EURO) HSP 1 Score: 127 bits (319), Expect = 6.420e-34 Identity = 64/146 (43.84%), Postives = 93/146 (63.70%), Query Frame = 1 Query: 4 VSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSVSDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRLS 441 + W EK+RP+ L DVSG+ ++ + F P+L+L+GPPG+GKTS+IL++A+ +G N+ M LELNA D R I +R+QI F +S + KL+ILDEAD +TS AQ ALR ++E + RFC+ NY ++LS Sbjct: 40 LPWVEKYRPSSLDDVSGHQDILATINRFVETNRLPHLLLYGPPGTGKTSTILALARRIYGTKNMRQMVLELNASDDRGIDVVREQIKTF---ASTAGSPLAGFKLIILDEADAMTSTAQMALRRIMERYTANTRFCVIANYTHKLS 182
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: A0A448ZS34_9STRA (AAA domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZS34_9STRA) HSP 1 Score: 130 bits (328), Expect = 6.440e-34 Identity = 64/145 (44.14%), Postives = 100/145 (68.97%), Query Frame = 1 Query: 4 VSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSVSDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRL 438 + W EK+RP RL+D+ +++++ + + + P+L+L+GPPG+GKTS+I++ AK +G + S+MTLELNA D+R IG +R++I F + R +KL+ILDEAD +TS AQ ALR +IE + ARFCL CNY++++ Sbjct: 13 LPWVEKYRPERLEDLVAHEKIVNIITTMIDNDNLPHLLLYGPPGTGKTSTIVAAAKRMYGASKYSSMTLELNASDARGIGVVRNEIKEFAGTQQLFSRG---VKLIILDEADAMTSDAQFALRRVIEKYTKNARFCLICNYVSKI 154
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: A0A1L9SDK8_9EURO (AAA domain-containing protein n=1 Tax=Penicilliopsis zonata CBS 506.65 TaxID=1073090 RepID=A0A1L9SDK8_9EURO) HSP 1 Score: 131 bits (329), Expect = 8.420e-34 Identity = 66/155 (42.58%), Postives = 94/155 (60.65%), Query Frame = 1 Query: 4 VSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSV---------SDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRLS 441 + W EK+RP L DVSG+ ++ + F P+L+L+GPPG+GKTS+IL++A+ +GG N+ M LELNA D R I +R+QI F + + S A KL+ILDEAD +TS AQ ALR ++E + RFC+ NY ++LS Sbjct: 44 LPWVEKYRPNTLDDVSGHQDILATINKFIDANRLPHLLLYGPPGTGKTSTILALARRIYGGKNMRQMVLELNASDDRGIDVVREQIKTFASTKQIFSMAPSTTANSSSLGAFKLIILDEADAMTSTAQMALRRIMEKYTANTRFCIIANYTHKLS 198
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: A0A1R2CLA2_9CILI (AAA domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CLA2_9CILI) HSP 1 Score: 129 bits (325), Expect = 8.960e-34 Identity = 65/145 (44.83%), Postives = 98/145 (67.59%), Query Frame = 1 Query: 4 VSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSVSDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRL 438 + W EK+RP L+D++ ++ +I ++ F + P+L+ +GPPG+GKTS+IL++AK +G N S+M+LELNA D R I +R+QI F +S T +KLVILDEAD +TS AQ ALR +IE + RFC+ CNY++++ Sbjct: 9 LPWVEKYRPNNLEDLAAHEAIISTIKKFIQEKKLPHLLFYGPPGTGKTSTILAVAKEMYG-KNFSSMSLELNASDDRGINVVREQIKNF---ASTQQIMTKGIKLVILDEADSMTSAAQFALRRIIEKYTKTTRFCMICNYVSKV 149
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: A0A1L9RCT6_ASPWE (AAA domain-containing protein n=1 Tax=Aspergillus wentii DTO 134E9 TaxID=1073089 RepID=A0A1L9RCT6_ASPWE) HSP 1 Score: 130 bits (328), Expect = 1.180e-33 Identity = 65/155 (41.94%), Postives = 94/155 (60.65%), Query Frame = 1 Query: 4 VSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSV---------SDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRLS 441 + W EK+RP L DVSG+ ++ + F M P+L+L+GPPG+GKTS+IL++A+ +G N+ M LELNA D R I +R+QI F + S + A KL++LDEAD +TS AQ ALR ++E + RFC+ NY ++LS Sbjct: 43 LPWVEKYRPNTLDDVSGHQDILATINKFVDMNRLPHLLLYGPPGTGKTSTILALARRIYGSKNMRQMVLELNASDDRGIDVVREQIKTFASTKQIFSMAPSTTPSGSALGAFKLIVLDEADAMTSTAQMALRRIMERYTANTRFCIIANYTHKLS 197
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: A0A132B999_9HELO (p-loop containing nucleoside triphosphate hydrolase protein n=2 Tax=Mollisiaceae TaxID=2755564 RepID=A0A132B999_9HELO) HSP 1 Score: 130 bits (328), Expect = 1.220e-33 Identity = 66/154 (42.86%), Postives = 94/154 (61.04%), Query Frame = 1 Query: 4 VSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSV--------SDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRLS 441 + W EK+RP L+DVSG+ ++ + F P+L+L+GPPG+GKTS+IL++A+ +G N+ M LELNA D R I +R+QI F + S S A KL+ILDEAD +TS AQ ALR ++E + RFC+ NY ++LS Sbjct: 45 LPWVEKYRPDTLEDVSGHQDILATINKFVDTNRLPHLLLYGPPGTGKTSTILALARRIYGAKNVRQMVLELNASDDRGIDVVREQIKTFASTKQIFTMNPTSNSSTSIAAYKLIILDEADAMTSTAQMALRRIMEKYTANTRFCIIANYTHKLS 198
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Match: A0A086Q7R5_TOXGO (Putative replication factor C, subunit 5 (Fragment) n=1 Tax=Toxoplasma gondii VAND TaxID=933077 RepID=A0A086Q7R5_TOXGO) HSP 1 Score: 127 bits (320), Expect = 1.690e-33 Identity = 69/176 (39.20%), Postives = 100/176 (56.82%), Query Frame = 1 Query: 4 VSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQIHFFTRCSSVSDRSTN------------------------------ALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYINRLS 441 + W EK+RP RL DV +D +IR ++++ P+L+ HGPPG+GKTS+IL++AK F+G + T LELNA D R I T+R+QI F SS S + +LKL+ILDEAD +T+ AQ ALR ++E + RFCL CN++N+++ Sbjct: 34 LPWVEKYRPERLSDVLAHDDIIRTIRNYVHKGQLPHLLFHGPPGTGKTSTILAVAKEFYGSA-VRTHVLELNASDDRGINTVREQIKTFAETSSTSFQQNRLIFGKSAVPATEAAEATSSHGQEKKGQGGPSLKLIILDEADQMTNAAQNALRRIMEAYARNVRFCLICNFVNKIT 208 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig98955.21538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig98955.21538.1 >prot_Ecto-sp13_S_contig98955.21538.1 ID=prot_Ecto-sp13_S_contig98955.21538.1|Name=mRNA_Ecto-sp13_S_contig98955.21538.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp MVSWTEKHRPTRLQDVSGNDQVIRALQSFKSMEATPNLILHGPPGSGKTSback to top mRNA from alignment at Ecto-sp13_S_contig98955:2..445- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig98955.21538.1 ID=mRNA_Ecto-sp13_S_contig98955.21538.1|Name=mRNA_Ecto-sp13_S_contig98955.21538.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=444bp|location=Sequence derived from alignment at Ecto-sp13_S_contig98955:2..445- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig98955:2..445- >mRNA_Ecto-sp13_S_contig98955.21538.1 ID=mRNA_Ecto-sp13_S_contig98955.21538.1|Name=mRNA_Ecto-sp13_S_contig98955.21538.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=444bp|location=Sequence derived from alignment at Ecto-sp13_S_contig98955:2..445- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |