prot_Ecto-sp13_S_contig9892.21532.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9892.21532.1
Unique Nameprot_Ecto-sp13_S_contig9892.21532.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length149
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9892.21532.1 vs. uniprot
Match: A0A6H5L2U6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U6_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 1.650e-75
Identity = 134/149 (89.93%), Postives = 144/149 (96.64%), Query Frame = 0 
Query:    1 EELKKKEADLEAEITAEEERHSRQAAAMSAFRAAERDDTAAQFGKDHADAAVERMKHRIEKLKAIQDGLSDKIPKKQKGKKKGFMGTMVDFALGTDREGDDDNEARELDYAEQTQLIAKKAKLALVNRQIQELKRAEKTIASDFASADA 149
            EELKKKEADLEAEITAEEERHSRQAAAMSAFR AERDDTAAQFGKDHADAAVERMKHRIEKLKAIQD LSDK  +KQKGKKKGFMGTMV+FALGT+REGDDDNEA+ELDYAEQTQLIAKKAKLALVNRQ++ELKRA+KT++ D+ASADA
Sbjct:  164 EELKKKEADLEAEITAEEERHSRQAAAMSAFRGAERDDTAAQFGKDHADAAVERMKHRIEKLKAIQDSLSDKT-EKQKGKKKGFMGTMVEFALGTEREGDDDNEAQELDYAEQTQLIAKKAKLALVNRQLEELKRAKKTVSLDYASADA 311
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BLAST of mRNA_Ecto-sp13_S_contig9892.21532.1 vs. uniprot
Match: D8LL55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL55_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 1.260e-52
Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 0 
Query:   28 MSAFRAAERDDTAAQFGKDHADAAVERMKHRIEKLKAIQ------DGLSDKIPKKQKGKKKGFMGTMVDFALGTDREGDDDNEARELDYAEQTQLIAKKAKLALVNRQIQELKRAEKTIASDFASADA 149
            MSAFRAAERDD AAQFGKDHADAAVERMKHRIEKLK IQ      DGLSDK P+KQKGKKKGFMGTMV+FALGT  E DD +EA+ELDYA+QTQLIAKKAKLALVNRQI++LKRA+KTI+SD+ASADA
Sbjct:    1 MSAFRAAERDDRAAQFGKDHADAAVERMKHRIEKLKEIQVLLQAKDGLSDKTPEKQKGKKKGFMGTMVEFALGTGGEDDDVSEAQELDYAKQTQLIAKKAKLALVNRQIEDLKRAKKTISSDYASADA 128
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9892.21532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L2U6_9PHAE1.650e-7589.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL55_ECTSI1.260e-5282.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 45..72
NoneNo IPR availableCOILSCoilCoilcoord: 116..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9892contigEcto-sp13_S_contig9892:2499..4506 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9892.21532.1mRNA_Ecto-sp13_S_contig9892.21532.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9892 2499..4508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9892.21532.1 ID=prot_Ecto-sp13_S_contig9892.21532.1|Name=mRNA_Ecto-sp13_S_contig9892.21532.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=149bp
EELKKKEADLEAEITAEEERHSRQAAAMSAFRAAERDDTAAQFGKDHADA
AVERMKHRIEKLKAIQDGLSDKIPKKQKGKKKGFMGTMVDFALGTDREGD
DDNEARELDYAEQTQLIAKKAKLALVNRQIQELKRAEKTIASDFASADA
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