prot_Ecto-sp13_S_contig989.21530.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig989.21530.1
Unique Nameprot_Ecto-sp13_S_contig989.21530.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length460
Homology
BLAST of mRNA_Ecto-sp13_S_contig989.21530.1 vs. uniprot
Match: D8LMA3_ECTSI (FtsJ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA3_ECTSI)

HSP 1 Score: 674 bits (1739), Expect = 9.730e-241
Identity = 362/416 (87.02%), Postives = 376/416 (90.38%), Query Frame = 0
Query:   45 LCVRVQALPKA-MEMQLIDEDTTFWDDNFPNLSRERQAGAFTHVLSLVFARGAFLWGLAEAATHGRSIIDNNNEDTAVCRAYYKIKEVTSRADLSFGDDWTAIDIGAAPGGWTSFLASKCRRVLSVDPAELDAAVLALPNVVHVQKPIEAAKGTLLHLLAEDVPAHERESGGGEGDERDDGGGLTHDARISGGGSSTPKESSLASRLTPGGPVASAGSAATAREPSPTGANGRPTATGKSKGAELVVSDMNAEPGVVADVLLSAMSAGLARPGALLVATFKDFCGRRKRMKDEVALAVERLKVGTAVVGGGASGFGEGDGGPAATPYGGSPPNAGTSGNDPDGGLEAGYGLSHGGAPPEARVAGVTCEKEGAGEEGWWRLEEIETMKLLAGGRAEVTIVARVAHGTGVTTAADGGR 459
            LC  ++ + KA MEMQLIDE+TTFWD+NFPNLSRERQAGAFTHVLSLVFARGAFLWGLA+AATHGRSIIDNNNEDTAVCRAYYKIKEVTSRADLSFG+DWTAIDIGAAPGGWTSFLASKCRRVLSVDPAELD+AVLALPNVVHVQK IEAAKGTLL LLAED PAHERES GGEG+ERDDGGG THD R+SGGGS TP+ SSL SRLTPGGP+ASAGSA TA E S  GAN RPTA GKS+GAELVVSDMNAEP VVADVLLSAMSAGLARPGALLVATFKDFCGRRKRMKDEVALAVERL+VGT VVGGGASG GEGDGGPAA P GG PPNAGTSGND DGGLEAG GLSH G PPE RVAGV CEKEGA  EGWWRLE IETMKLLAGGRAEVTIVARVAHGTGV    DGGR
Sbjct:   50 LCTSLEDVGKAVMEMQLIDEETTFWDENFPNLSRERQAGAFTHVLSLVFARGAFLWGLAQAATHGRSIIDNNNEDTAVCRAYYKIKEVTSRADLSFGEDWTAIDIGAAPGGWTSFLASKCRRVLSVDPAELDSAVLALPNVVHVQKLIEAAKGTLLDLLAEDAPAHERESRGGEGEERDDGGGRTHDGRLSGGGSFTPEASSLGSRLTPGGPIASAGSADTAGEASSMGANDRPTAPGKSQGAELVVSDMNAEPAVVADVLLSAMSAGLARPGALLVATFKDFCGRRKRMKDEVALAVERLRVGTFVVGGGASGVGEGDGGPAAAPCGGGPPNAGTSGNDADGGLEAGNGLSHAGTPPEGRVAGVACEKEGA--EGWWRLEGIETMKLLAGGRAEVTIVARVAHGTGVANGGDGGR 463          
BLAST of mRNA_Ecto-sp13_S_contig989.21530.1 vs. uniprot
Match: A0A6H5JWK0_9PHAE (FtsJ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK0_9PHAE)

HSP 1 Score: 457 bits (1177), Expect = 3.160e-157
Identity = 257/315 (81.59%), Postives = 265/315 (84.13%), Query Frame = 0
Query:  144 TAIDIGAAPGGWTSFLASKCRRVLSVDPAELDAAVLALPNVVHVQKPIEAAKGTLLHLLAEDVPAHERESGGGEGDERDDGGGLTHDARISGGGSSTPKESSLASRLTPGGPVASAGSAATAREPSPTGANGRPTATGKSKGAELVVSDMNAEPGVVADVLLSAMSAGLARPGALLVATFKDFCGRRKRMKDEVALAVERLKVGTAVVGGGASGFGEGDGGPAATPYGGSPPNAGTSGNDPDGGLEAGYGLSHGGAPPEARVAGVTCEKEGAGEEGWWRLEEIETMKLLAGGRAEVTIVARVAHGTGVTTAADGG 458
            T IDIGAAPGGWTSFLASKCRRVLSVDPAELD AVLALPNVVHVQ+ IEAA+GTL  LLAED P HERE G GEG+ERDDGGG THD R SGGGSSTP++SSLASRLTPGGPVASAGSA TA E S  GANGRP A GK  GAELVVSDMNAEP VVADVLLSAMSAGLARPGALLVATFKDFCGRRKRMKDEVA+AVERL+VGTA+V GGASG G           GG PPNA TSGND D GLE G GLSH G PPE RVAGV CEKEGAGEEGWWRLEEIETMKLLAGGRAEVTIVARVAHGT V    DGG
Sbjct:   27 TQIDIGAAPGGWTSFLASKCRRVLSVDPAELDPAVLALPNVVHVQQLIEAAEGTLHELLAEDAPTHERECGCGEGEERDDGGGRTHDGRNSGGGSSTPEQSSLASRLTPGGPVASAGSADTADEASSMGANGRPAAPGKRGGAELVVSDMNAEPAVVADVLLSAMSAGLARPGALLVATFKDFCGRRKRMKDEVAVAVERLRVGTAIVDGGASGVGXXXXXXXXXXCGGGPPNAETSGNDADEGLEPGNGLSHAGTPPEGRVAGVACEKEGAGEEGWWRLEEIETMKLLAGGRAEVTIVARVAHGTEVANGGDGG 341          
BLAST of mRNA_Ecto-sp13_S_contig989.21530.1 vs. uniprot
Match: A0A6H5JTM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTM6_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.090e-26
Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 0
Query:   45 LCVRVQALPKA-MEMQLIDEDTTFWDDNFPNLSRERQAGAFTHVLSLVFARGAFLWGLAEAATHGR 109
            LC  ++ + KA MEMQLIDE+TTFWDDNFPNLSRERQAGAFTHVLSLVFARGAFLWGLAEAATHGR
Sbjct:  132 LCASLEDVGKAVMEMQLIDEETTFWDDNFPNLSRERQAGAFTHVLSLVFARGAFLWGLAEAATHGR 197          
BLAST of mRNA_Ecto-sp13_S_contig989.21530.1 vs. uniprot
Match: A0A835YXR4_9STRA (FtsJ domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXR4_9STRA)

HSP 1 Score: 106 bits (264), Expect = 8.520e-21
Identity = 55/153 (35.95%), Postives = 92/153 (60.13%), Query Frame = 0
Query:   47 VRVQALPKAMEMQLIDEDT----TFWDDNFPNLSRERQAGA-FTHVLSLVFARGAFLWGLAEAATHGRSIIDNNNEDTAVCRAYYKIKEVTSRADLSFGDDWTAIDIGAAPGGWTSFLASKCRRVLSVDPAELDAAVLALPNVVHVQKPIEAA 194
            VR QA P+++E +L+++         +  + + +  R     F  V S+V+ +G F  G+   A     I+  + +  A CRA+YK++E T RA +++  +W A+D+GA+PGGWT FL+ +  RV +VDP  +DA VLALPNV +++  ++AA
Sbjct:  276 VRFQACPRSLEKELLNDHALAMKAIKEPKYKDFAALRLHPIDFELVASVVYTQGLFFAGVVPRAAWPGDIVAASIDAHAPCRAFYKLREATDRAGIAYQQNWNALDMGASPGGWTHFLSPRVARVFAVDPGSMDADVLALPNVTYLRAKVQAA 428          
BLAST of mRNA_Ecto-sp13_S_contig989.21530.1 vs. uniprot
Match: L8GJZ6_ACACA (Ribosomal RNA large subunit methyltransferase J, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GJZ6_ACACA)

HSP 1 Score: 87.0 bits (214), Expect = 7.800e-15
Identity = 53/114 (46.49%), Postives = 72/114 (63.16%), Query Frame = 0
Query:   84 FTHVLSLVFARGAFLWGLA--EAATHGRSIIDNNNEDTAVCRAYYKIKEVTSRAD-LSFGD--DWTAIDIGAAPGGWTSFLASKCRRVLSVDPAELDAAVLALPNVVHVQKPIE 192
            FTHVLS+   RG + +GLA  E      S + +   D  V RAY+K+KEV +R D L   D   WTAID+GAAPGGWT +L+   ++V+S+DP EL   +   PNVVH++K +E
Sbjct:  214 FTHVLSIARERGRYYYGLAPKELFWGPESGVHSVQMDK-VSRAYHKMKEVFTRIDCLRLADTAQWTAIDVGAAPGGWTQYLSPLMKQVISIDPGELR--IELPPNVVHLKKKVE 324          
BLAST of mRNA_Ecto-sp13_S_contig989.21530.1 vs. uniprot
Match: A0A7S4B2L4_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B2L4_CHRCT)

HSP 1 Score: 81.6 bits (200), Expect = 6.900e-13
Identity = 44/99 (44.44%), Postives = 64/99 (64.65%), Query Frame = 0
Query:  103 EAATHGRSIIDNNNEDTA-VCRAYYKIKEVTSRADLSFGDDWTAIDIGAAPGGWTSFLASK-CRRVLSVDPAELDAAVLALPNVVHVQKPIEAAKGTLL 199
            EAA H  S      + +A VCRAYYK+KE+ SR  ++F D   AID+GA+PGGWTS+LA + C +++++DPAEL       P V H+++ ++ A   LL
Sbjct:  345 EAAAHNDSAATRMRQTSAPVCRAYYKLKELGSRELVAFSDCSVAIDVGASPGGWTSYLAERGCSKIIAIDPAELRQTEPPPPCVEHLRQKLQDALPGLL 443          
BLAST of mRNA_Ecto-sp13_S_contig989.21530.1 vs. uniprot
Match: A0A8J5XDG9_DIALT (FtsJ domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XDG9_DIALT)

HSP 1 Score: 79.7 bits (195), Expect = 2.970e-12
Identity = 53/155 (34.19%), Postives = 70/155 (45.16%), Query Frame = 0
Query:   78 ERQAGAFTHVLSLVFARGAFLWGLAEAATHGRSIIDNNNEDTAVCRAYYKIKEVTSRADLSFGD--------------------------------DWTAIDIGAAPGGWTSFLASK-CRRVLSVDPAELDAAVLALPNVVHVQKPIEAAKGTLL 199
            E + G  THV++L +A G   WG+  A  +G   +D+   D A  RAYYK++E      + FG                                    A+D+GAAPGGWTS L       V +VDPAELDA VL LP V H++   E A   +L
Sbjct:  274 EPKRGRHTHVVALAWANGPLAWGVEPAEAYGFKDLDSFLADAATSRAYYKLREALV---MHFGAAAXXXXXXXXXXXXXXXPAEGAGRAVAPPLLRGLRAVDVGAAPGGWTSCLIEHGAAHVTAVDPAELDAQVLVLPGVAHMRMRAEEAAAAML 425          
BLAST of mRNA_Ecto-sp13_S_contig989.21530.1 vs. uniprot
Match: A0A7S4QYI9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QYI9_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.700e-12
Identity = 57/177 (32.20%), Postives = 86/177 (48.59%), Query Frame = 0
Query:   47 VRVQALPKAMEMQLIDEDTTFWDDNFPNLSRERQAGAFTHVLSLV----FARGAFLWGLA-----EAATHGRSIIDNNNEDTAVCRAYYKIKEVTSRADLSFGDDWT---AIDIGAAPGGWTSFLAS--KCRRVLSVDPAELDAAVLALPN-----VVHVQKPIEAAKGTLLHLLAE 204
            VR    P ++  +LI    ++ + N+P L       + TH+L  V      R + LW +       AA+     I+NNN    +CRA  K++E  +R + +  D      A+D GAAPGGWT FLA   +C+R+ S+DP ELD  +    +     V H+Q  +E A   +L L  E
Sbjct:   92 VRFNTFPSSIAQELI----SYLEHNYPQLLHLLAPTSCTHILHAVKIPTTLRNSHLWCMGMDQVTTAASDSSQKIENNN---LICRAQSKLQEAYARYNYALPDATNGLIAVDCGAAPGGWTQFLAMTVQCKRIYSIDPGELDPIIFNTHHGDERVVQHLQIKVEDAMSEILQLEKE 261          
BLAST of mRNA_Ecto-sp13_S_contig989.21530.1 vs. uniprot
Match: A0A7S4QYH7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QYH7_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.260e-11
Identity = 57/177 (32.20%), Postives = 86/177 (48.59%), Query Frame = 0
Query:   47 VRVQALPKAMEMQLIDEDTTFWDDNFPNLSRERQAGAFTHVLSLV----FARGAFLWGLA-----EAATHGRSIIDNNNEDTAVCRAYYKIKEVTSRADLSFGDDWT---AIDIGAAPGGWTSFLAS--KCRRVLSVDPAELDAAVLALPN-----VVHVQKPIEAAKGTLLHLLAE 204
            VR    P ++  +LI    ++ + N+P L       + TH+L  V      R + LW +       AA+     I+NNN    +CRA  K++E  +R + +  D      A+D GAAPGGWT FLA   +C+R+ S+DP ELD  +    +     V H+Q  +E A   +L L  E
Sbjct:  302 VRFNTFPSSIAQELI----SYLEHNYPQLLHLLAPTSCTHILHAVKIPTTLRNSHLWCMGMDQVTTAASDSSQKIENNN---LICRAQSKLQEAYARYNYALPDATNGLIAVDCGAAPGGWTQFLAMTVQCKRIYSIDPGELDPIIFNTHHGDERVVQHLQIKVEDAMSEILQLEKE 471          
BLAST of mRNA_Ecto-sp13_S_contig989.21530.1 vs. uniprot
Match: A0A5J4YAH7_9CHLO (Glycerophosphocholine acyltransferase 1 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YAH7_9CHLO)

HSP 1 Score: 76.3 bits (186), Expect = 4.650e-11
Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 0
Query:   84 FTHVLSLVFARGAFLWGLAEA-ATHGRSIIDNNNEDTAVCRAYYKIKEVTSRADLSFGDDWTAIDIGAAPGGWTSFLASKCRRVLSVDPAELDAAVLALPNVVHVQKPIEAAKGTLLHLL 202
            F +VL++V   G  LW L EA  T+ R+ +   +    V  A +K++E         G +  AID+GAAPGGW+ +LA     V++VDPA+L    L+LPNV H+Q   E A   +  LL
Sbjct:   81 FQYVLNVVANEGTLLWNLHEADGTYRRTTLLTESPQKCVSSAVHKLEEALHVVGHHVGSNQRAIDLGAAPGGWSLYLAKHVAMVIAVDPADLSPQ-LSLPNVHHLQCKSEVAGDAIETLL 199          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig989.21530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMA3_ECTSI9.730e-24187.02FtsJ domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JWK0_9PHAE3.160e-15781.59FtsJ domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JTM6_9PHAE1.090e-2686.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YXR4_9STRA8.520e-2135.95FtsJ domain-containing protein n=1 Tax=Tribonema m... [more]
L8GJZ6_ACACA7.800e-1546.49Ribosomal RNA large subunit methyltransferase J, p... [more]
A0A7S4B2L4_CHRCT6.900e-1344.44Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A8J5XDG9_DIALT2.970e-1234.19FtsJ domain-containing protein n=1 Tax=Diacronema ... [more]
A0A7S4QYI9_9STRA4.700e-1232.20Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4QYH7_9STRA2.260e-1132.20Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A5J4YAH7_9CHLO4.650e-1138.33Glycerophosphocholine acyltransferase 1 n=1 Tax=Tr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002877Ribosomal RNA methyltransferase FtsJ domainPFAMPF01728FtsJcoord: 121..294
e-value: 1.3E-8
score: 35.1
NoneNo IPR availablePANTHERPTHR37524FAMILY NOT NAMEDcoord: 117..189
NoneNo IPR availablePANTHERPTHR37524:SF2RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE Mcoord: 117..189
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 138..324
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 113..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig989contigEcto-sp13_S_contig989:16957..19970 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig989.21530.1mRNA_Ecto-sp13_S_contig989.21530.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig989 16957..19970 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig989.21530.1 ID=prot_Ecto-sp13_S_contig989.21530.1|Name=mRNA_Ecto-sp13_S_contig989.21530.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=460bp
VSKAVAEGKYPGGRPAPGTDDTATTPTGAVAGGATLPPPPPPPPLCVRVQ
ALPKAMEMQLIDEDTTFWDDNFPNLSRERQAGAFTHVLSLVFARGAFLWG
LAEAATHGRSIIDNNNEDTAVCRAYYKIKEVTSRADLSFGDDWTAIDIGA
APGGWTSFLASKCRRVLSVDPAELDAAVLALPNVVHVQKPIEAAKGTLLH
LLAEDVPAHERESGGGEGDERDDGGGLTHDARISGGGSSTPKESSLASRL
TPGGPVASAGSAATAREPSPTGANGRPTATGKSKGAELVVSDMNAEPGVV
ADVLLSAMSAGLARPGALLVATFKDFCGRRKRMKDEVALAVERLKVGTAV
VGGGASGFGEGDGGPAATPYGGSPPNAGTSGNDPDGGLEAGYGLSHGGAP
PEARVAGVTCEKEGAGEEGWWRLEEIETMKLLAGGRAEVTIVARVAHGTG
VTTAADGGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002877rRNA_MeTrfase_FtsJ_dom
IPR029063SAM-dependent_MTases