prot_Ecto-sp13_S_contig9866.21510.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9866.21510.1
Unique Nameprot_Ecto-sp13_S_contig9866.21510.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length491
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9866.21510.1 vs. uniprot
Match: D8LS02_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS02_ECTSI)

HSP 1 Score: 428 bits (1101), Expect = 6.060e-140
Identity = 412/497 (82.90%), Postives = 415/497 (83.50%), Query Frame = 0 
Query:    1 RYLPNAKFLVHVEVDMPERLMREVLRASGWRTRFIVYEIVAKLFDAPIKPGVVPPPTGRSPAVAAAANLKLREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIDLETARALIAAEVPLMEMSHPHVRGSVIAGELIGATFAKNFGRDGMWEGTVTKFLPAKNTKPSSLYYKTGTSAAGTSYYKAGATAAAHAAVXXXXXXXXXXXXXXXXXXXXXPPCAAGVKTSSIATTPASPPATPGAATAATRAPXXXXXXXXXXXXGVLGRKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------TPTGGGALSRESFPLDAGESNAPATGXXXXXXXXXXXXXXXXXXXXNKGKFSLLAKRMPVRAKQLRVKDKAMILRHAFWKDVWPHLLKDGWKMHHVMQGDRHARYYFPTGVVRGQGNRLRIDYFDSIKH 491
            RYLPNAKFLVHVEVDMPERLMREVLRASGWRTRFIVYEIVAKLFDAP KPGVVP PTGRSPAVAAAANLKLREA      XXXXXXXXXXXXXXXXXXXXXXDIDLETARALIAAEVPLMEMSHPHVRGSVIAGELIGATFAKNFGRDGMWEGTVTKFLPAKNTKPSSLYYKTGTSAAG SYYKAGATAAAHAAVXXXXXXXXXXXXXXXXXXXXX                                 XXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      TPTGGG LSRESFPLDAGES A A G                    +KGKFSLLAKRMPV+AKQLRVKDKAMILRHAFWKDVWPHLLKDGWKMHHVMQGDRHARYYFPTGV+RGQGNRLRIDYFDSIKH
Sbjct:   87 RYLPNAKFLVHVEVDMPERLMREVLRASGWRTRFIVYEIVAKLFDAPTKPGVVPAPTGRSPAVAAAANLKLREAAEEKLAXXXXXXXXXXXXXXXXXXXXXXDIDLETARALIAAEVPLMEMSHPHVRGSVIAGELIGATFAKNFGRDGMWEGTVTKFLPAKNTKPSSLYYKTGTSAAGASYYKAGATAAAHAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATPTGGGTLSRESFPLDAGESYAAAAGTEVGSGASPKSDGNSSSSS-SKGKFSLLAKRMPVKAKQLRVKDKAMILRHAFWKDVWPHLLKDGWKMHHVMQGDRHARYYFPTGVIRGQGNRLRIDYFDSIKH 582
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9866.21510.1 vs. uniprot
Match: A0A6H5KPQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPQ2_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 8.630e-64
Identity = 132/145 (91.03%), Postives = 133/145 (91.72%), Query Frame = 0 
Query:   16 MPERLMREVLRASGWRTRFIVYEIVAKLFDAPIKPGVVPPPTGRSPAVAAAANLKLREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIDLETARALIAAEVPLMEMSHPHVRGSVIAGELIGATFAKNFGRDGMWEGTVTKFLP 160
            MPERLMREV+RASGWRTRFIVYEIVAKLFDAPIKPGVVP PTGRSPAVAAAANLKLREA         XXXXXXXXXXXXXXXXXXXDIDLETARALIAAEVPLMEMSHPHVRGSVIAGELIGATFAKNFGRDGMWEGTVTK  P
Sbjct:    1 MPERLMREVVRASGWRTRFIVYEIVAKLFDAPIKPGVVPTPTGRSPAVAAAANLKLREAAEEKLAAKRXXXXXXXXXXXXXXXXXXXDIDLETARALIAAEVPLMEMSHPHVRGSVIAGELIGATFAKNFGRDGMWEGTVTKVSP 145
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9866.21510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LS02_ECTSI6.060e-14082.90Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KPQ2_9PHAE8.630e-6491.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9866contigEcto-sp13_S_contig9866:814..4782 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9866.21510.1mRNA_Ecto-sp13_S_contig9866.21510.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9866 814..4782 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9866.21510.1 ID=prot_Ecto-sp13_S_contig9866.21510.1|Name=mRNA_Ecto-sp13_S_contig9866.21510.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=491bp
RYLPNAKFLVHVEVDMPERLMREVLRASGWRTRFIVYEIVAKLFDAPIKP
GVVPPPTGRSPAVAAAANLKLREAAEEKLAAKRERREAAAAEGKGGGDEE
DDDIDLETARALIAAEVPLMEMSHPHVRGSVIAGELIGATFAKNFGRDGM
WEGTVTKFLPAKNTKPSSLYYKTGTSAAGTSYYKAGATAAAHAAVAAAAA
AAAAAAAAAKPKAKAKPPCAAGVKTSSIATTPASPPATPGAATAATRAPA
PAPAPAPAASAGVLGRKRLRVQVDSYSPSSPAVSPAPKAAGGRSTKGKGK
GRAAAVIESRSPDERGRGKADGRGVSVKAEAGRPKKRGRPAAGGAKGGGV
GFKAEAAEAESATPTGGGALSRESFPLDAGESNAPATGTDVGSGASPKSD
GNGNGSSSNKGKFSLLAKRMPVRAKQLRVKDKAMILRHAFWKDVWPHLLK
DGWKMHHVMQGDRHARYYFPTGVVRGQGNRLRIDYFDSIKH
back to top