prot_Ecto-sp13_S_contig9862.21504.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9862.21504.1
Unique Nameprot_Ecto-sp13_S_contig9862.21504.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length116
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9862.21504.1 vs. uniprot
Match: A0A7S2D9P1_9STRA (Tubulin beta chain (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D9P1_9STRA)

HSP 1 Score: 184 bits (466), Expect = 3.300e-57
Identity = 87/91 (95.60%), Postives = 90/91 (98.90%), Query Frame = 0 
Query:    1 MDLEPGTMDSVRSGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVR 91
            MDLEPGTMDSVR+GPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQLTHSMGGGTG+GMGTLLISK+R
Sbjct:    5 MDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGSGMGTLLISKIR 95
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9862.21504.1 vs. uniprot
Match: A0A7S1U3I3_9STRA (Tubulin beta chain (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3I3_9STRA)

HSP 1 Score: 185 bits (469), Expect = 3.670e-57
Identity = 88/91 (96.70%), Postives = 90/91 (98.90%), Query Frame = 0 
Query:    1 MDLEPGTMDSVRSGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVR 91
            MDLEPGTMDSVR+GPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQLTHSMGGGTGAGMGTLLISK+R
Sbjct:   81 MDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIR 171
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9862.21504.1 vs. uniprot
Match: A0A821PHQ3_9BILA (Tubulin beta chain (Fragment) n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A821PHQ3_9BILA)

HSP 1 Score: 180 bits (457), Expect = 7.310e-57
Identity = 84/91 (92.31%), Postives = 90/91 (98.90%), Query Frame = 0 
Query:    1 MDLEPGTMDSVRSGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVR 91
            +DLEPGTMDSVRSGPFGQLFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKEAESCD LQGFQLTHS+GGGTG+GMGTLLISK+R
Sbjct:   14 VDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIR 104
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9862.21504.1 vs. uniprot
Match: A0A7S1NSD1_9EUGL (Tubulin beta chain (Fragment) n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NSD1_9EUGL)

HSP 1 Score: 182 bits (462), Expect = 1.340e-56
Identity = 85/91 (93.41%), Postives = 90/91 (98.90%), Query Frame = 0 
Query:    1 MDLEPGTMDSVRSGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVR 91
            MDLEPGTMDSVR+GPFGQ+FRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQ+THSMGGGTG+GMGTLLISK+R
Sbjct:   72 MDLEPGTMDSVRAGPFGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQMTHSMGGGTGSGMGTLLISKIR 162
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9862.21504.1 vs. uniprot
Match: A0A6A0AGU3_HAELA (Tubulin beta chain (Fragment) n=3 Tax=Eukaryota TaxID=2759 RepID=A0A6A0AGU3_HAELA)

HSP 1 Score: 182 bits (461), Expect = 3.040e-56
Identity = 85/91 (93.41%), Postives = 90/91 (98.90%), Query Frame = 0 
Query:    1 MDLEPGTMDSVRSGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVR 91
            MDLEPGTMDSVRSGPFGQ+FRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQ+THS+GGGTG+GMGTLLISK+R
Sbjct:   66 MDLEPGTMDSVRSGPFGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQVTHSLGGGTGSGMGTLLISKIR 156
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9862.21504.1 vs. uniprot
Match: A0A0G2UEH6_PHYCP (Tubulin beta chain (Fragment) n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A0G2UEH6_PHYCP)

HSP 1 Score: 181 bits (458), Expect = 3.080e-56
Identity = 84/91 (92.31%), Postives = 90/91 (98.90%), Query Frame = 0 
Query:    1 MDLEPGTMDSVRSGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVR 91
            MDLEPGTMDSVR+GP+GQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQ+THS+GGGTG+GMGTLLISK+R
Sbjct:   32 MDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKIR 122
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9862.21504.1 vs. uniprot
Match: Q460M0_AGECO (Tubulin beta chain (Fragment) n=1 Tax=Agelas conifera TaxID=295242 RepID=Q460M0_AGECO)

HSP 1 Score: 179 bits (455), Expect = 3.270e-56
Identity = 83/91 (91.21%), Postives = 90/91 (98.90%), Query Frame = 0 
Query:    1 MDLEPGTMDSVRSGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVR 91
            +DLEPGTMDSVRSGPFGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKEAESCD LQGFQLTHS+GGGTG+GMGTLLISK+R
Sbjct:   37 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIR 127
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9862.21504.1 vs. uniprot
Match: A0A1L6K409_MIAAV (Tubulin beta chain (Fragment) n=1 Tax=Miamiensis avidus TaxID=279580 RepID=A0A1L6K409_MIAAV)

HSP 1 Score: 179 bits (454), Expect = 3.480e-56
Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 0 
Query:    1 MDLEPGTMDSVRSGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVR 91
            MDLEPGTMDSVR+GPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAE CD LQGFQ+THS+GGGTG+GMGT LISKVR
Sbjct:   31 MDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTFLISKVR 121
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9862.21504.1 vs. uniprot
Match: A0A816GJ29_ADIRI (Tubulin beta chain n=2 Tax=Opisthokonta TaxID=33154 RepID=A0A816GJ29_ADIRI)

HSP 1 Score: 180 bits (457), Expect = 3.840e-56
Identity = 84/91 (92.31%), Postives = 90/91 (98.90%), Query Frame = 0 
Query:    1 MDLEPGTMDSVRSGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVR 91
            +DLEPGTMDSVRSGPFGQLFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKEAESCD LQGFQLTHS+GGGTG+GMGTLLISK+R
Sbjct:   66 VDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIR 156
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9862.21504.1 vs. uniprot
Match: Q460L9_AGEDI (Tubulin beta chain (Fragment) n=1 Tax=Agelas dispar TaxID=295252 RepID=Q460L9_AGEDI)

HSP 1 Score: 179 bits (455), Expect = 4.360e-56
Identity = 83/91 (91.21%), Postives = 90/91 (98.90%), Query Frame = 0 
Query:    1 MDLEPGTMDSVRSGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVR 91
            +DLEPGTMDSVRSGPFGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKEAESCD LQGFQLTHS+GGGTG+GMGTLLISK+R
Sbjct:   46 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIR 136
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9862.21504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2D9P1_9STRA3.300e-5795.60Tubulin beta chain (Fragment) n=1 Tax=Dictyocha sp... [more]
A0A7S1U3I3_9STRA3.670e-5796.70Tubulin beta chain (Fragment) n=2 Tax=Phaeomonas p... [more]
A0A821PHQ3_9BILA7.310e-5792.31Tubulin beta chain (Fragment) n=1 Tax=Rotaria sp. ... [more]
A0A7S1NSD1_9EUGL1.340e-5693.41Tubulin beta chain (Fragment) n=2 Tax=Eutreptiella... [more]
A0A6A0AGU3_HAELA3.040e-5693.41Tubulin beta chain (Fragment) n=3 Tax=Eukaryota Ta... [more]
A0A0G2UEH6_PHYCP3.080e-5692.31Tubulin beta chain (Fragment) n=2 Tax=Stramenopile... [more]
Q460M0_AGECO3.270e-5691.21Tubulin beta chain (Fragment) n=1 Tax=Agelas conif... [more]
A0A1L6K409_MIAAV3.480e-5692.31Tubulin beta chain (Fragment) n=1 Tax=Miamiensis a... [more]
A0A816GJ29_ADIRI3.840e-5692.31Tubulin beta chain n=2 Tax=Opisthokonta TaxID=3315... [more]
Q460L9_AGEDI4.360e-5691.21Tubulin beta chain (Fragment) n=1 Tax=Agelas dispa... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000217TubulinPRINTSPR01161TUBULINcoord: 28..39
score: 73.28
coord: 67..85
score: 72.13
coord: 41..65
score: 67.5
IPR000217TubulinPANTHERPTHR11588TUBULINcoord: 1..92
IPR004057Epsilon tubulinPRINTSPR01519EPSLNTUBULINcoord: 2..15
score: 35.71
coord: 36..54
score: 39.47
coord: 57..76
score: 52.5
coord: 15..33
score: 34.21
IPR003008Tubulin/FtsZ, GTPase domainSMARTSM00864Tubulin_4coord: 1..111
e-value: 5.8E-4
score: -16.7
IPR003008Tubulin/FtsZ, GTPase domainPFAMPF00091Tubulincoord: 1..93
e-value: 2.6E-28
score: 99.6
IPR036525Tubulin/FtsZ, GTPase domain superfamilyGENE3D3.40.50.1440coord: 1..97
e-value: 3.8E-43
score: 149.8
IPR036525Tubulin/FtsZ, GTPase domain superfamilySUPERFAMILY52490Tubulin nucleotide-binding domain-likecoord: 1..93
NoneNo IPR availablePANTHERPTHR11588:SF351coord: 1..92
IPR017975Tubulin, conserved sitePROSITEPS00227TUBULINcoord: 75..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9862contigEcto-sp13_S_contig9862:4746..5093 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9862.21504.1mRNA_Ecto-sp13_S_contig9862.21504.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9862 4593..5184 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9862.21504.1 ID=prot_Ecto-sp13_S_contig9862.21504.1|Name=mRNA_Ecto-sp13_S_contig9862.21504.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=116bp
MDLEPGTMDSVRSGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDS
VLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVRRRGYRLGCG
RAWCGCFCLDVYWVL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000217Tubulin
IPR004057Epsilon_tubulin
IPR003008Tubulin_FtsZ_GTPase
IPR036525Tubulin/FtsZ_GTPase_sf
IPR017975Tubulin_CS