prot_Ecto-sp13_S_contig9860.21503.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9860.21503.1
Unique Nameprot_Ecto-sp13_S_contig9860.21503.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length433
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9860.21503.1 vs. uniprot
Match: D8LPV6_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV6_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 6.910e-70
Identity = 141/149 (94.63%), Postives = 143/149 (95.97%), Query Frame = 0 
Query:  142 IVQDLVFGRKNRSKSVFSPAKGTGVTATWLKDKNARVAMSKGGVGAGEGHGGSAGRYQSVPSPSYADSSGHGXXXXXXXXXXXXXXXAPATVPSWTDAGGSHSSRIAARAGDGSNADPDSNATTPRSGADSLTPLGAAVPPRLSSSPRE 290
            +VQDLVFGR+NRSKSVFSPAKG GVTATWLKDKNARVAMSKGGVGAGEGHGG   RYQSVPSPSYADSSGHGXXXXXXXXXXXXXXXAPATVPSWTDAGGSHSSR AARAG GSNADPDSNATTPRSGADSLTPLGAAVPPRLSSSPRE
Sbjct:    1 MVQDLVFGRRNRSKSVFSPAKGAGVTATWLKDKNARVAMSKGGVGAGEGHGG---RYQSVPSPSYADSSGHGXXXXXXXXXXXXXXXAPATVPSWTDAGGSHSSRTAARAGGGSNADPDSNATTPRSGADSLTPLGAAVPPRLSSSPRE 146
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BLAST of mRNA_Ecto-sp13_S_contig9860.21503.1 vs. uniprot
Match: A0A6H5KU66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU66_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 8.360e-70
Identity = 240/341 (70.38%), Postives = 244/341 (71.55%), Query Frame = 0 
Query:   94 MAVVEED-GREGEDEAGGRVHGGRRSASKPPSKLSVSERRKNAGKAVDTIVQDLVFGRKNRSKSVFSPAKGTGVTATWLKDKNARVAMSKGGVGAGEGHGGSAGRYQSVPSPSYADSSGHGXXXXXXXXXXXXXXXAPATVPSWTDAGGSHSSRIAARAGDGSNADPDSNATTPRSGADSLTPLGAAVPPRLSSSPREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESFPVEPGGRNNSGSSVENGSRSGRXXXXXXXXXXXXHSVRDGXXXXXXXXXXXXXXXXXXXXXXXSIDSLATDTAASSLHGYXXXXXXXXXXXXXXXXXXXEPGLDGVLAA 433
            MAVVEED GR              RSASKPPSKLSVSERRKN GK VDT+VQ+LVFGRKNRSKSVFSPAKGTGVTATWLKDKNARVA+SKGG GAGEGH GSAGRYQSVPSPSYA+SSGHGXXXXXXXX              W         R AARAGDGSNADPDSNATTPRSGADSLTPLGAAVPPRLSSSPREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                         XXXXXXXXXXXX      XXXXXXXXXXXXXXX        SIDSLATDTAASSLHGY XXXX              EPGLDGVLAA
Sbjct:    1 MAVVEEDDGRXXXXXXXXXXXXXXRSASKPPSKLSVSERRKNVGKVVDTVVQELVFGRKNRSKSVFSPAKGTGVTATWLKDKNARVAISKGGGGAGEGHRGSAGRYQSVPSPSYAESSGHGXXXXXXXX-----------XXXW---------RTAARAGDGSNADPDSNATTPRSGADSLTPLGAAVPPRLSSSPREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVGRGSGSIDSLATDTAASSLHGYGXXXXDWDVSKEEDGGRGGEPGLDGVLAA 317
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9860.21503.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPV6_ECTSI6.910e-7094.63Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KU66_9PHAE8.360e-7070.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9860contigEcto-sp13_S_contig9860:2..4713 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9860.21503.1mRNA_Ecto-sp13_S_contig9860.21503.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9860 2..5001 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9860.21503.1 ID=prot_Ecto-sp13_S_contig9860.21503.1|Name=mRNA_Ecto-sp13_S_contig9860.21503.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=433bp
MASSERLDELVARARALFESKHGPSEGCFASYSPAKINVMGDAIEGSGGL
TLQITLDRRVVIFGRGRVIPAPDSPTDGKRGGPTSPRQQQVFGMAVVEED
GREGEDEAGGRVHGGRRSASKPPSKLSVSERRKNAGKAVDTIVQDLVFGR
KNRSKSVFSPAKGTGVTATWLKDKNARVAMSKGGVGAGEGHGGSAGRYQS
VPSPSYADSSGHGSGHGSGHGSRHWSASAPATVPSWTDAGGSHSSRIAAR
AGDGSNADPDSNATTPRSGADSLTPLGAAVPPRLSSSPREEYRSGGGGGG
GFTPQYGSSAATTATGSTTTEESFPVEPGGRNNSGSSVENGSRSGRGGGG
GGSGDDGDHSVRDGGGGGGGGDGDGDGDGDDVGRGSGSIDSLATDTAASS
LHGYGGGGGDWDASKEEDGGGGGEPGLDGVLAA
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