Homology
BLAST of mRNA_Ecto-sp13_S_contig9860.21503.1 vs. uniprot
Match:
D8LPV6_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV6_ECTSI)
HSP 1 Score: 234 bits (596), Expect = 9.250e-69
Identity = 141/149 (94.63%), Postives = 143/149 (95.97%), Query Frame = 1
Query: 712 IVQDLVFGRKNRSKSVFSPAKGTGVTATWLKDKNARVAMSKGGVGAGEGHGGSAGRYQSVPSPSYADSSGHGXXXXXXXXXXXXXXXAPATVPSWTDAGGSHSSRIAARAGDGSNADPDSNATTPRSGADSLTPLGAAVPPRLSSSPRE 1158
+VQDLVFGR+NRSKSVFSPAKG GVTATWLKDKNARVAMSKGGVGAGEGHGG RYQSVPSPSYADSSGHGXXXXXXXXXXXXXXXAPATVPSWTDAGGSHSSR AARAG GSNADPDSNATTPRSGADSLTPLGAAVPPRLSSSPRE
Sbjct: 1 MVQDLVFGRRNRSKSVFSPAKGAGVTATWLKDKNARVAMSKGGVGAGEGHGG---RYQSVPSPSYADSSGHGXXXXXXXXXXXXXXXAPATVPSWTDAGGSHSSRTAARAGGGSNADPDSNATTPRSGADSLTPLGAAVPPRLSSSPRE 146
BLAST of mRNA_Ecto-sp13_S_contig9860.21503.1 vs. uniprot
Match:
A0A6H5KU66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU66_9PHAE)
HSP 1 Score: 243 bits (621), Expect = 1.200e-68
Identity = 240/341 (70.38%), Postives = 244/341 (71.55%), Query Frame = 1
Query: 568 MAVVEED-GREGEDEAGGRVHGGRRSASKPPSKLSVSERRKNAGKAVDTIVQDLVFGRKNRSKSVFSPAKGTGVTATWLKDKNARVAMSKGGVGAGEGHGGSAGRYQSVPSPSYADSSGHGXXXXXXXXXXXXXXXAPATVPSWTDAGGSHSSRIAARAGDGSNADPDSNATTPRSGADSLTPLGAAVPPRLSSSPREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESFPVEPGGRNNSGSSVENGSRSGRXXXXXXXXXXXXHSVRDGXXXXXXXXXXXXXXXXXXXXXXXSIDSLATDTAASSLHGYXXXXXXXXXXXXXXXXXXXEPGLDGVLAA 1587
MAVVEED GR RSASKPPSKLSVSERRKN GK VDT+VQ+LVFGRKNRSKSVFSPAKGTGVTATWLKDKNARVA+SKGG GAGEGH GSAGRYQSVPSPSYA+SSGHGXXXXXXXX W R AARAGDGSNADPDSNATTPRSGADSLTPLGAAVPPRLSSSPREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXX XXXXXXXXXXXXXXX SIDSLATDTAASSLHGY XXXX EPGLDGVLAA
Sbjct: 1 MAVVEEDDGRXXXXXXXXXXXXXXRSASKPPSKLSVSERRKNVGKVVDTVVQELVFGRKNRSKSVFSPAKGTGVTATWLKDKNARVAISKGGGGAGEGHRGSAGRYQSVPSPSYAESSGHGXXXXXXXX-----------XXXW---------RTAARAGDGSNADPDSNATTPRSGADSLTPLGAAVPPRLSSSPREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVGRGSGSIDSLATDTAASSLHGYGXXXXDWDVSKEEDGGRGGEPGLDGVLAA 317
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9860.21503.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 9.25e-69 / Id = 94.63 Expect = 1.20e-68 / Id = 70.38 Sequence D8LPV6_ECTSI A0A6H5KU66_9PHAE
Match Name E-value Identity Description
D8LPV6_ECTSI 9.250e-69 94.63 Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more] A0A6H5KU66_9PHAE 1.200e-68 70.38 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 0 Start 1 Seed ortholog score 63.9 Seed ortholog evalue 2.1e-07 Seed eggNOG ortholog 2880.D7FSK4 Preferred name GALK1 Model size 1587 KEGG rclass RC00002,RC00078 KEGG ko ko:K00849 KEGG Reaction R01092 KEGG Pathway ko00052,ko00520,ko01100,map00052,map00520,map01100 KEGG Module M00554,M00632 Hectar predicted targeting category other localisation GOs GO:0000166,GO:0003674,GO:0003824,GO:0004335,GO:0005488,GO:0005524,GO:0005534,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006012,GO:0006059,GO:0006066,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019200,GO:0019318,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019388,GO:0019400,GO:0019402,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019751,GO:0019752,GO:0030246,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0033499,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0042866,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0048029,GO:0051186,GO:0051188,GO:0055086,GO:0061615,GO:0061620,GO:0061622,GO:0061623,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615 Exons 4 EggNOG free text desc. galactokinase activity EggNOG OGs COG0153@1,KOG0631@2759 Ec32 ortholog description hypothetical protein Ec32 ortholog Ec-02_004240.1 EC 2.7.1.6 Cds size 1299 COG Functional cat. G Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00002,ko01000,ko04147
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681464248.062172-CDS-Ecto-sp13_S_contig9860:1..623 1681464248.062172-CDS-Ecto-sp13_S_contig9860:1..623 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9860 2..623 - 1681464248.0772853-CDS-Ecto-sp13_S_contig9860:978..1251 1681464248.0772853-CDS-Ecto-sp13_S_contig9860:978..1251 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9860 979..1251 - 1681464248.0878868-CDS-Ecto-sp13_S_contig9860:1683..1976 1681464248.0878868-CDS-Ecto-sp13_S_contig9860:1683..1976 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9860 1684..1976 - 1681464248.1011558-CDS-Ecto-sp13_S_contig9860:4602..4713 1681464248.1011558-CDS-Ecto-sp13_S_contig9860:4602..4713 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9860 4603..4713 -
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681464248.118871-UTR-Ecto-sp13_S_contig9860:4713..5001 1681464248.118871-UTR-Ecto-sp13_S_contig9860:4713..5001 Ectocarpus species13 EcNAP12_S_4_19m UTR Ecto-sp13_S_contig9860 4714..5001 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9860.21503.1
>prot_Ecto-sp13_S_contig9860.21503.1 ID=prot_Ecto-sp13_S_contig9860.21503.1|Name=mRNA_Ecto-sp13_S_contig9860.21503.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=433bp
MASSERLDELVARARALFESKHGPSEGCFASYSPAKINVMGDAIEGSGGL back to top mRNA from alignment at Ecto-sp13_S_contig9860:2..5001-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9860.21503.1 ID=mRNA_Ecto-sp13_S_contig9860.21503.1|Name=mRNA_Ecto-sp13_S_contig9860.21503.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5000bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9860:2..5001- (Ectocarpus species13 EcNAP12_S_4_19m)GTGTCATGTCATCCGAGAGACAAAAGAGACAGAACAAGGGTGCGGACGGT
GCTCCTTTGCGTGAAGACGGAAAGGGTCTTACCTTCACAACCTCCTTGTC
GTTTCGGCTGCAAGGAGAGGGCGAGCCCGTGTCGGCGACGACACGGAGCA
AAGGCAAAAGGCAGCAGCAGCGACGACACGAGAGATCACAGAAACGCAGG
AACAGCGGTCTCCGGGCAAACTTCTTCTTGTCACCTTGCCACAAGATCAG
GGTCGAGCCGACAACGACGGACGGTGTTTTGATGTGCG ATGGCTTCTTCG
GAACGATTGGATGAACTCGTGGCGAGAGCTCGTGCCCTGTTCGAGAGCAA
GCACGGACCCTCGGAGGGTTGCTTCGCATCTTACAGCCCAGCGAAAATC G
TGAGTGTGTTTCGAGAGCGTGAGAGAGAAGAAGATAGAATGGAAACTTTC
GTCCGAAAACCCAACCTCGACCAACACCAAGGTTTGAAGCAAGTTCCTGC
CGGTGTTTCCTGTGTCCAGTTGTTGCGAAAGTGCCCTGCTGGCTGCGCTT
TGGATCAGGCTTAAAACCCCGCATACGGAGCACCGCTGCTTGCTAGCGTT
GCCACCGGTCGATCAAACGCATCCCTTGGGTCAGCAAAACATGTGTTATT
TCAACCCTGTGGCAGATGTCGCTTTTTTTGTCGCGATTTTTTGGGTCCCG
AAGCATTATTTTTCTCTCTCCTCTCTCTCTCTTGCAATTTGTGGAGCTTA
CCACGTCAAGGCATTCGAGACCAGTCCTCGTTATTAAAGTTGCACCGACT
GGTACAACAGCAGTTAGATGTTAAGTAGACACCGGAGCGGTGTTGTGTTC
ATGCGTTGCAACAACAGGCCCAACAACAACAACGACAGCTTTGACGCCTT
TCTCGGAATAATCGAATAGAACGGAGAGGGTGTTCATGGAACGACTTAAG
GGTATGCATAGAAAGACGACTCGACTCCACCCATCCTCTTGTTGATTCTA
CTTACTGCGGGCAGCGTCGCATGGTCTCCATGCAGCAGGGCTCTTCAAAA
CCCAAACACTCATTTGTAACATTCTGCTGTTGGTGCTTTTCAAGAAGATA
CCGTAAGGTTGCGAGTCAGCACACAGGGGTGCGAACGATTTTCAAAGCGT
AATTCCTCCGCAACCATGAGGTTACTACTGCGTTGTCGAATAGGGCGGTT
TTGGAAATACAAATATCTTTTTCAAGCTTTCCTGACGGCACCCTCCTGGT
TGTGGAGAAATTACAATTATGCTTTGAGAATCGATGGCACCTCTGTGCGC
TGACTCGTTATCTTACCGTCTTCCATTGTAAGGAGGCACTGACTGCCGTA
CCCGTTCCAGACAAAACCACAGCAACCAGTCTTCGTGGTCTTTTCTCCAG
CTGCAAACGTGCAAACAGCAGTGGTTCTATTTTCTCGCCGCGTGTACCTG
TACAGGTAAAGGTGCATGAATGCATGCATACATTCAAGCGCTTCTTTCTA
CACACAACCATCGAGGCAACCTCTACGTATGTGTCTGCATACAGATAGCT
GTGCGAAAACAAACGCTAGTGTCTGTGTTGTTGGTATTATTGGTCGAGAG
TAAATGCCTGTGGCGCGGCCGACTCGCGTTGCTCCCACAGGCACGTGTAG
CGGGTTTTGCCGGCGTTATGGGGTGTGCGGTTACAGCAGCAGTGCGCGGT
GACTCGCTTCGCTCGAGGTTCGGGCGTTTTATGTTCAGCAGTGTACAGTC
ACACCAGTACGCCTGCTTGTTCACCGGGTTTTCTTTCCACCGTTGACCAT
ACACATGTGCGATGCAAGAGCAGTCGTGGCGAGCCTCTTGGCTCAGTAGT
GCTTGCCCATTTGTCAATAAACAAGGTTCCCGGAATATTCTCGTCATTGT
TCTGGTTTTGTTGTGCACACCTCCAGTTGTGCCACCCTAGCCTTTCACCG
TGCGGTAACCTAGCGCTGACAGTGCACAGCAACCTAGCCCTGCAGCAATA
GCCCTACAACCTAGCCCTCACCACTCTTGCGCCGGGGCTTAGCCTAGCAG
CAACCTAGAACGTTAACTTGCCTCAGCAACCTAGCTTTTCGCCGGTGCAG
CAACCTGGCGCTGACGGCGCACAGCAACCTATAAGCGCTGATGGTGCACA
GCAACCCAGGTCGCTAGCGTGCTCGCTCAAACGGCAGTTTCGTGCACGAG
CATTGTGGCGTCGCAAACTTTCGGTGGTTCTCTTTGACCCGAAAACGCTT
GACACGTGTTTGGAAGATGACGAAGTAGGTTGTTCTTTCTCCATTGGCCA
GAACAGGGGTGTTGACCGCTTACAGTAGCAAGGGCCGTGCATACAAACTC
CCCCTCGACACGCCCAACTCATGAAGTCGGTTCCTACAACAATGGCATTT
GTTATACATGCGTGGTAGTTTTTTCAGGAGGATTGTCACACATTTGAGCG
CGCTGAACACCGCAACAGACACAACAGCAGTCCACTCTATTGGTACTACG
GATAACAAGTGCAAGCAATGGAATGCACTCAAGCAAGTCTTGCACCACGC
TTGGATCGATTGAGGTTCAAAACCGGGAGGGTTTGAACAGGCGGCGGGGC
ACTGTGTGCTGGATTCTTGACTAGTGGACCATCTCGTCTTGGAAGAGTTC
GAGGTCTTTGAGGGAGGCTGACTCAAGCCATATTCACGTGCTGCGCGTGA
AAGCATGCTTGTCTTCCTGACAGTGTGCATGCACTCATGTACCATCCCAG
TACGATGCCCCTCATGATCGAGTCTACACTCTATCTTCCGCGCACGACGA
GAAACAAGCAAAGGCGTGTGTCATTCACCCAACTACGTACAGTAGTGTAC
GTCCATATCTGCGTCATTTTTTGCGTCTTCTGCCCGTATTATCGTCATTG
TGATTGGAGACACAGACATTGTACACATTTACTTCTTGCCATGCGAAGCT
GACAAGTCCTGCACACGTTCCTCATCCTTCGCGGTTGTGTTTTTTGCGGC
TCTCTCCCCCCCCCCGCGCACACAGAACGTCATGGGAGACGCAATCGAAG
GCAGCGGTGGGCTCACCCTTCAGATAACTCTAGACCGTAGGGTCGTGATT
TTTGGCAGAGGTCGGGTGATCCCGGCACCAGACTCTCCGACGGACGGGAA
GAGAGGGGGACCCACGTCTCCGCGACAGCAGCAGGTGTTCGGGATGGCGG
TAGTGGAGGAGGACGGGAGAGAAGGGGAAGATGAAGCAGGCGGCCGCGTT
CATGGTGGGCGTCGGTCGGCGTCCAAGCCCCCGTCGAAGCTGTCCGTTAG
CGAGAGAAGGAAGAATGC GTGAGTACTATGAGTGGTGAGGGGGGTGGGAG
TCGGCGGTATGACTTTTGTTTTGGACGTGCGGTATTTTTTTCTTGGGCGG
GGGTGCGGAGCCGGTGTGGGCGGGGTGTACTCATAGTCGTGCATGCCGCA
GTCGTTAGACCATTGTGCATGCCGGTGTGGGGGGGGGGGGGGCAAGAGTG
AAGCCTTCAGTCCGATAAGAGTTTCAGCTCTTCGCTGAACATCCCTATTG
TTCGATCACATTGTATTCCCGCGAGTTGATTTTCGGTTCGACGCTTGGGT
GTTCTTTTGTAGCCTCCATCCATCCCGCCCCCCGCAAATAATCTCTCGCC
CCCCCCCAACAAAAATTGAACATAGAACACATCAAAGCGCGGCATCAACG
GCATCACCCACCCACCCACCCCTTCCTCTTCTCTCGACAACACTCTGCAG
AGGAAAAGCGGTAGACACGATTGTTCAAGACCTAGTTTTCGGCCGAAAAA
ACAGGAGCAAGTCAGTCTTCAGCCCCGCGAAGGGGACCGGGGTCACCGCG
ACGTGGCTCAAGGATAAGAACGCCAGGGTAGCTATGTCCAAAGGCGGCGT
CGGCGCAGGGGAAGGGCACGGCGGGAGTGCTGGGCGCTACCAATCCGTGC
CGAGCCCGAGCTATGCCGACTCCAGTGGACATGGCAGCGGGCACGGCAGT
GGGCACGGAAGCAGACATTGGAG GTGAGAATCGGTTCGAGAGTACGGGGG
TAGTGTGTACGGTGGCTTGTATCGTGTAGAACCGCATCAGATGTCCGTGA
GTCACGGCTGAGTGTTCGTCATAGGTTGGTTTCGAAGTTCTGTTGTGTCA
AGGGCAGCATTCACATGGCAAATTGACCCGCTCGACTGTCCGTGGTATGT
TTGCGTCTTCCTTCGTAGCCGACTCTCGAGCGAGTATCCTCTCACACGCC
AAGTCGCTTTTCACACGCAAATGACACTCGCCCGAACTTGCACCAACCCA
GCCGACGCGACGTCAACCGCCCCACCCCCCCCCCCCCGCCCCCCCACCAA
TGTCGTCGATCCTGATTCCTACCCAAAGCGCAAGCGCACCCGCCACGGTG
CCTTCTTGGACCGACGCTGGCGGGTCTCATTCTAGCAGGATCGCCGCGAG
AGCCGGGGACGGCAGCAACGCGGACCCGGACTCGAACGCCACGACGCCCC
GGAGCGGGGCGGACAGCCTGACGCCGCTGGGGGCGGCCGTCCCTCCCAGG
CTCTCCTCCTCCCCAAGAGAGGAGTACCGCAGCGGCGGCGGCGGCGGCGG
CGGCTTCACGCCTCAGTACGGGTCGTCTGCCGCCACCACCGCGACCGGGT
CGACGACCACCGAGGAATCCTTTCCGGTGGAGCCCGGCGGGCGCAACAAT
TCCGGCAGCAGCGTCGAGAACGGCAGCAGGAGCGGCCGGGGCGGCGGTGG
CGGCGGCAGCGGCGACGATGGAGACCACAGCGTAAGAGATGGCGGCGGCG
GCGGCGGCGGCGGCGACGGCGACGGCGACGGCGACGGCGACGACGTGGGC
CGGGGCTCGGGCTCGATCGATTCGCTTGCCACGGACACGGCGGCGTCTAG
CCTGCACGGCTACGGCGGGGGCGGCGGCGACTGGGACGCCTCCAAGGAAG
AGGACGGCGGGGGGGGCGGGGAGCCGGGGCTGGACGGGGTGTTGGCGGCG
back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9860:2..5001-
>mRNA_Ecto-sp13_S_contig9860.21503.1 ID=mRNA_Ecto-sp13_S_contig9860.21503.1|Name=mRNA_Ecto-sp13_S_contig9860.21503.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1299bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9860:2..5001- (Ectocarpus species13 EcNAP12_S_4_19m) back to top