prot_Ecto-sp13_S_contig98593.21502.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig98593.21502.1
Unique Nameprot_Ecto-sp13_S_contig98593.21502.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length83
Homology
BLAST of mRNA_Ecto-sp13_S_contig98593.21502.1 vs. uniprot
Match: D8LTV7_ECTSI (Presenilin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV7_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 2.530e-41
Identity = 75/83 (90.36%), Postives = 77/83 (92.77%), Query Frame = 0
Query:    1 HALTPPLAVAAATFVIVWMYWMRCMRCLVGYMTMSSAVLLGVMGGAVWAAALEVYQLPCDALTYYGVLWNFAVVGVVAIFYQK 83
            +AL   L +AAATFVIVWMYWMRCMRCLVGYM MSSAVLLGVMGGAVWAAALEVYQLPCDA TYYGVLWNFAVVGVVAIFYQK
Sbjct:  128 NALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQK 210          
BLAST of mRNA_Ecto-sp13_S_contig98593.21502.1 vs. uniprot
Match: A0A6H5KLU3_9PHAE (Presenilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLU3_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 3.030e-41
Identity = 75/83 (90.36%), Postives = 77/83 (92.77%), Query Frame = 0
Query:    1 HALTPPLAVAAATFVIVWMYWMRCMRCLVGYMTMSSAVLLGVMGGAVWAAALEVYQLPCDALTYYGVLWNFAVVGVVAIFYQK 83
            +AL   L +AAATFVIVWMYWMRCMRCLVGYM MSSAVLLGVMGGAVWAAALEVYQLPCDA TYYGVLWNFAVVGVVAIFYQK
Sbjct:  128 NALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQK 210          
BLAST of mRNA_Ecto-sp13_S_contig98593.21502.1 vs. uniprot
Match: W7TKB5_9STRA (Presenilin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKB5_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.770e-20
Identity = 48/83 (57.83%), Postives = 60/83 (72.29%), Query Frame = 0
Query:    1 HALTPPLAVAAATFVIVWMYWMRCMRCLVGYMTMSSAVLLGVMGGAVWAAALEVYQLPCDALTYYGVLWNFAVVGVVAIFYQK 83
            +ALT    +  ATFV+V +Y  RCM+CL GYM +SS +LLG+MGG +W  AL  + LPCD  T+  VL+NFA VGVVAIFYQK
Sbjct:  114 NALTIVGVICGATFVVVLLYKFRCMKCLFGYMALSSTMLLGLMGGLLWYTALIRWDLPCDYFTFVIVLYNFAFVGVVAIFYQK 196          
BLAST of mRNA_Ecto-sp13_S_contig98593.21502.1 vs. uniprot
Match: A0A7S2XWZ8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWZ8_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 4.730e-19
Identity = 45/83 (54.22%), Postives = 61/83 (73.49%), Query Frame = 0
Query:    1 HALTPPLAVAAATFVIVWMYWMRCMRCLVGYMTMSSAVLLGVMGGAVWAAALEVYQLPCDALTYYGVLWNFAVVGVVAIFYQK 83
            +ALT  L +A ATF IV +Y  RCM+CL+GYM  SS +LLG+MGG V   AL+ + +  D  TYY +L+NF++VGV+AIFYQ+
Sbjct:   79 NALTIVLVLAGATFAIVLLYKFRCMKCLIGYMMFSSVMLLGIMGGMVLWTALDKWNVVMDEYTYYFILYNFSMVGVIAIFYQQ 161          
BLAST of mRNA_Ecto-sp13_S_contig98593.21502.1 vs. uniprot
Match: A0A7S2F2R2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F2R2_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.020e-18
Identity = 44/83 (53.01%), Postives = 64/83 (77.11%), Query Frame = 0
Query:    1 HALTPPLAVAAATFVIVWMYWMRCMRCLVGYMTMSSAVLLGVMGGAVWAAALEVYQLPCDALTYYGVLWNFAVVGVVAIFYQK 83
            +AL     +AAATF IV +Y  RCM+ L+GYM +SS +LLG+MG  +   ALE++Q+PCDA+T+Y + +NFAVVGV++IF++K
Sbjct:   46 NALIIVCVLAAATFGIVCLYKYRCMKLLIGYMMLSSMMLLGLMGSLMLWTALELWQVPCDAITFYFIAYNFAVVGVISIFWKK 128          
BLAST of mRNA_Ecto-sp13_S_contig98593.21502.1 vs. uniprot
Match: A0A7S2A8L3_TRICV (Presenilin (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8L3_TRICV)

HSP 1 Score: 85.9 bits (211), Expect = 4.290e-18
Identity = 44/83 (53.01%), Postives = 58/83 (69.88%), Query Frame = 0
Query:    1 HALTPPLAVAAATFVIVWMYWMRCMRCLVGYMTMSSAVLLGVMGGAVWAAALEVYQLPCDALTYYGVLWNFAVVGVVAIFYQK 83
            +AL     + A TFVIV +Y  RCM+CL+GYM  SS  LLG++GG V   A++ Y++P D LT+   LWNFA VGV+AIFYQ+
Sbjct:  129 NALVMVTVIGAMTFVIVLLYKYRCMKCLIGYMIFSSGSLLGLLGGVVAQVAVDKYRIPVDWLTFALGLWNFAAVGVLAIFYQR 211          
BLAST of mRNA_Ecto-sp13_S_contig98593.21502.1 vs. uniprot
Match: A0A7S4S6U3_9STRA (Presenilin n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S6U3_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 9.150e-18
Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    1 HALTPPLAVAAATFVIVWMYWMRCMRCLVGYMTMSSAVLLGVMGGAVWAAALEVYQLPCDALTYYGVLWNFAVVGVVAIFYQ 82
            +AL     + A TFVIV +Y  R MRCL+ YM  SSA+LLGV+GG ++  A+E Y+LP DA ++   L+NFA+VGV+AIFYQ
Sbjct:   50 NALVMVCFICALTFVIVILYKFRFMRCLIAYMVYSSAMLLGVLGGVLFDVAIEKYRLPVDAFSFLFALYNFALVGVIAIFYQ 131          
BLAST of mRNA_Ecto-sp13_S_contig98593.21502.1 vs. uniprot
Match: B7FQB3_PHATC (Presenilin n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQB3_PHATC)

HSP 1 Score: 84.3 bits (207), Expect = 1.020e-17
Identity = 39/75 (52.00%), Postives = 57/75 (76.00%), Query Frame = 0
Query:    9 VAAATFVIVWMYWMRCMRCLVGYMTMSSAVLLGVMGGAVWAAALEVYQLPCDALTYYGVLWNFAVVGVVAIFYQK 83
            + A TFVIV +Y +R M+CL+GYM +SS  LLGV+GG +   A+ +Y++P D LT+YG ++NF VVGV+AIF+ +
Sbjct:   11 ICALTFVIVLLYHLRFMKCLIGYMIISSGTLLGVLGGNMMQVAVAIYEIPVDKLTFYGFIYNFCVVGVLAIFFGR 85          
BLAST of mRNA_Ecto-sp13_S_contig98593.21502.1 vs. uniprot
Match: A0A1E7FFK3_9STRA (Presenilin-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFK3_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.750e-17
Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 0
Query:   13 TFVIVWMYWMRCMRCLVGYMTMSSAVLLGVMGGAVWAAALEVYQLPCDALTYYGVLWNFAVVGVVAIFYQK 83
            TFVIV +Y   CM  L+GYM  +S  LLG +GG +W  A+++Y LP D +TY+ VLWNFA VG+++IFY K
Sbjct:    9 TFVIVLLYKYNCMWLLIGYMMFASTSLLGFLGGHIWYVAIQIYSLPVDKMTYFLVLWNFAAVGILSIFYGK 79          
BLAST of mRNA_Ecto-sp13_S_contig98593.21502.1 vs. uniprot
Match: A0A7S2UN25_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UN25_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 3.990e-17
Identity = 40/72 (55.56%), Postives = 54/72 (75.00%), Query Frame = 0
Query:   11 AATFVIVWMYWMRCMRCLVGYMTMSSAVLLGVMGGAVWAAALEVYQLPCDALTYYGVLWNFAVVGVVAIFYQ 82
            A TFVIV +Y  RCM+ L+GYM +SSA LLG++G A+    +E Y+ P D +T+Y  ++NFAVVGVVAIF+Q
Sbjct:  135 AMTFVIVGLYKFRCMKVLIGYMVLSSATLLGILGAAMLEVGIERYRFPVDVVTFYSGMYNFAVVGVVAIFWQ 206          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig98593.21502.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTV7_ECTSI2.530e-4190.36Presenilin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5KLU3_9PHAE3.030e-4190.36Presenilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
W7TKB5_9STRA1.770e-2057.83Presenilin-like protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2XWZ8_9STRA4.730e-1954.22Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2F2R2_9STRA1.020e-1853.01Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2A8L3_TRICV4.290e-1853.01Presenilin (Fragment) n=1 Tax=Trieres chinensis Ta... [more]
A0A7S4S6U3_9STRA9.150e-1853.66Presenilin n=1 Tax=Ditylum brightwellii TaxID=4924... [more]
B7FQB3_PHATC1.020e-1752.00Presenilin n=3 Tax=Phaeodactylum tricornutum TaxID... [more]
A0A1E7FFK3_9STRA2.750e-1753.52Presenilin-domain-containing protein n=1 Tax=Fragi... [more]
A0A7S2UN25_9STRA3.990e-1755.56Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001108Peptidase A22A, presenilinPFAMPF01080Presenilincoord: 8..82
e-value: 3.4E-23
score: 82.1
IPR001108Peptidase A22A, presenilinPANTHERPTHR10202PRESENILINcoord: 8..83
NoneNo IPR availablePANTHERPTHR10202:SF13PRESENILIN HOMOLOGcoord: 8..83
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 23..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..61
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..83
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..81
NoneNo IPR availableTMHMMTMhelixcoord: 29..51
NoneNo IPR availableTMHMMTMhelixcoord: 61..80
NoneNo IPR availableTMHMMTMhelixcoord: 5..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig98593contigEcto-sp13_S_contig98593:267..515 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig98593.21502.1mRNA_Ecto-sp13_S_contig98593.21502.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig98593 267..515 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig98593.21502.1 ID=prot_Ecto-sp13_S_contig98593.21502.1|Name=mRNA_Ecto-sp13_S_contig98593.21502.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=83bp
HALTPPLAVAAATFVIVWMYWMRCMRCLVGYMTMSSAVLLGVMGGAVWAA
ALEVYQLPCDALTYYGVLWNFAVVGVVAIFYQK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001108Peptidase_A22A