prot_Ecto-sp13_S_contig9851.21492.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9851.21492.1
Unique Nameprot_Ecto-sp13_S_contig9851.21492.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length143
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9851.21492.1 vs. uniprot
Match: A0A6H5JN98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN98_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 2.010e-9
Identity = 32/55 (58.18%), Postives = 37/55 (67.27%), Query Frame = 0 
Query:   25 APLPDSGFHALAPYPLQGLGVETLPVGAFLALVTDNSHEQSVVYRPQRPALVLTW 79
            A L D GF+ALA  PLQ LGV  L V  FLALV D+S EQS++YRPQR  +   W
Sbjct:    2 ASLSDRGFNALAFDPLQRLGVRELSVDVFLALVPDDSKEQSMLYRPQRLIVAAEW 56
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9851.21492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JN98_9PHAE2.010e-958.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9851contigEcto-sp13_S_contig9851:4399..4827 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9851.21492.1mRNA_Ecto-sp13_S_contig9851.21492.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9851 4399..4984 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9851.21492.1 ID=prot_Ecto-sp13_S_contig9851.21492.1|Name=mRNA_Ecto-sp13_S_contig9851.21492.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=143bp
QIAEHHPLRESSAWLPYQRSREQQAPLPDSGFHALAPYPLQGLGVETLPV
GAFLALVTDNSHEQSVVYRPQRPALVLTWGPCHAAVQQCLHRLGREQANL
ESERCVRPVEELMTISPDACPRCSAPVIDPSGEVAMFVDEAT*
back to top