prot_Ecto-sp13_S_contig985.21491.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig985.21491.1
Unique Nameprot_Ecto-sp13_S_contig985.21491.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length260
Homology
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BLAST of mRNA_Ecto-sp13_S_contig985.21491.1 vs. uniprot
Match: A0A6H5JZM6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZM6_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 2.820e-37
Identity = 110/248 (44.35%), Postives = 138/248 (55.65%), Query Frame = 0 
Query:   14 QQTLENPNFAGELPTSDDVPPAESQLAPPPVAEPRDPP--SGGHVENKGFAPPNVHCTATTPPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSSTRSRIQRVVDNHPDLLAEGSISELPPHIMTLMHRLFDTARQNQGRTQLLRSAPSSGGDPSTTPRSTPRNDNNRGG-GNSSRSAPRERSRCSHPSCKKPLGHTTDTCFQRKREKVQATKNHRENTRPVAKRSCAEDRIPR-KDQNNDD 257
            Q +L N    GELPT  D P    +L+ PPVAE RD P  SGGHVE KGF PP+          +      XXXXXX                     ++ST S+IQ VVD H DL+ +G + +LP H++ LM R+F+  RQN+GRT   +S  S            PR+  +RG  GNS R   +ER RC+HP+C KPLGHTT TCFQ+KRE+    +N R N +P AKR CAEDR PR KD + DD
Sbjct:   10 QLSLSNLANNGELPT--DQP---GELSVPPVAEARDTPPTSGGHVEAKGFDPPSPXXX------NVQDLVIXXXXXXSVASTAAPSVGAPSASSSSTDLTSTLSKIQSVVDRHLDLVTDGRLEQLPDHVVQLMDRMFEHHRQNRGRTPAFQSGSSXXXXXXXXXXXAPRHGTHRGXXGNSRRPVRKERPRCTHPTCDKPLGHTTATCFQKKREEAATERNRRRN-QPTAKRPCAEDRTPRSKDASTDD 245
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig985.21491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JZM6_9PHAE2.820e-3744.35Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig985contigEcto-sp13_S_contig985:10512..13169 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig985.21491.1mRNA_Ecto-sp13_S_contig985.21491.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig985 10263..13169 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig985.21491.1 ID=prot_Ecto-sp13_S_contig985.21491.1|Name=mRNA_Ecto-sp13_S_contig985.21491.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=260bp
MSFELTEQQLLEEQQTLENPNFAGELPTSDDVPPAESQLAPPPVAEPRDP
PSGGHVENKGFAPPNVHCTATTPPPSPTPSATPAPSPSVTSSATPSAGAP
SIAPSASTNMSSTRSRIQRVVDNHPDLLAEGSISELPPHIMTLMHRLFDT
ARQNQGRTQLLRSAPSSGGDPSTTPRSTPRNDNNRGGGNSSRSAPRERSR
CSHPSCKKPLGHTTDTCFQRKREKVQATKNHRENTRPVAKRSCAEDRIPR
KDQNNDDSDA
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