prot_Ecto-sp13_S_contig9838.21484.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9838.21484.1
Unique Nameprot_Ecto-sp13_S_contig9838.21484.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length251
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9838.21484.1 vs. uniprot
Match: A0A6H5L5V2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5V2_9PHAE)

HSP 1 Score: 387 bits (995), Expect = 7.020e-134
Identity = 208/215 (96.74%), Postives = 211/215 (98.14%), Query Frame = 0 
Query:   34 MSDTDDDFDMPDSTLFSRPGSKDKDKAYAAQNKKKKSTPSFMSGLDALVAESTLDAERSEKISEIMNLGEDILEKDLLKTEQQKARTDATEAKDKADHKAIMEDTSIRIPGVIRVFRQPEEQGPPDLRFEPPQPAGELSVLAEAVKLAESDPADLEELLRSGLVPWLRKQLRGKGKTVPPEVFRWLLRLVARHEACAVVAAAEETLLRLLAEDDM 248
            MSDTDDDFDMPDSTLFSRPGSKDKDKA AAQNKKK STPSFMSGLDALVAESTL+AERSEKISEIMNLGEDILEKDLLKTEQQKARTDA EAKDKADHKAIMEDTSIRIPGVIRVFRQPEEQGPPDLRFEPPQPAGELSVLAEAVKLAESDPADLEELLRSGLVPWLRK+L+GKGKTVPPEVFRWLLRLV RHEACAVVAAAEETLLRLLAEDDM
Sbjct:    1 MSDTDDDFDMPDSTLFSRPGSKDKDKASAAQNKKK-STPSFMSGLDALVAESTLNAERSEKISEIMNLGEDILEKDLLKTEQQKARTDAFEAKDKADHKAIMEDTSIRIPGVIRVFRQPEEQGPPDLRFEPPQPAGELSVLAEAVKLAESDPADLEELLRSGLVPWLRKKLKGKGKTVPPEVFRWLLRLVTRHEACAVVAAAEETLLRLLAEDDM 214
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BLAST of mRNA_Ecto-sp13_S_contig9838.21484.1 vs. uniprot
Match: D7FJ25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ25_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 1.630e-82
Identity = 139/148 (93.92%), Postives = 141/148 (95.27%), Query Frame = 0 
Query:   34 MSDTDDDFDMPDSTLFSRPGSKDKDKAYAAQNKKKKSTPSFMSGLDALVAESTLDAERSEKISEIMNLGEDILEKDLLKTEQQKARTDATEAKDKADHKAIMEDTSIRIPGVIRVFRQPEEQGPPDLRFEPPQPAGELSVLAEAVKLA 181
            MSDTDDDFDMPDSTLFSRPGSK KDKA + QNKKK STPSFMSGLDALVAESTL+AERSEKISEIMNL EDILEKDLLKTEQQKARTDA EAKDKADHKAIMEDTSIRIPGVIRVFRQPEEQGPPDLRFEPPQP GELSVLAEAVKLA
Sbjct:    1 MSDTDDDFDMPDSTLFSRPGSKGKDKASSTQNKKK-STPSFMSGLDALVAESTLNAERSEKISEIMNLAEDILEKDLLKTEQQKARTDAAEAKDKADHKAIMEDTSIRIPGVIRVFRQPEEQGPPDLRFEPPQPEGELSVLAEAVKLA 147
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9838.21484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5V2_9PHAE7.020e-13496.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ25_ECTSI1.630e-8293.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9838contigEcto-sp13_S_contig9838:656..6035 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9838.21484.1mRNA_Ecto-sp13_S_contig9838.21484.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9838 656..6035 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9838.21484.1 ID=prot_Ecto-sp13_S_contig9838.21484.1|Name=mRNA_Ecto-sp13_S_contig9838.21484.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=251bp
PTGWPLNSAPEASSTEQHQVSSLCFVCRKHREIMSDTDDDFDMPDSTLFS
RPGSKDKDKAYAAQNKKKKSTPSFMSGLDALVAESTLDAERSEKISEIMN
LGEDILEKDLLKTEQQKARTDATEAKDKADHKAIMEDTSIRIPGVIRVFR
QPEEQGPPDLRFEPPQPAGELSVLAEAVKLAESDPADLEELLRSGLVPWL
RKQLRGKGKTVPPEVFRWLLRLVARHEACAVVAAAEETLLRLLAEDDMVR
*
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