prot_Ecto-sp13_S_contig98355.21483.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig98355.21483.1
Unique Nameprot_Ecto-sp13_S_contig98355.21483.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length137
Homology
BLAST of mRNA_Ecto-sp13_S_contig98355.21483.1 vs. uniprot
Match: A0A6H5KCL5_9PHAE (GMC_OxRdtase_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCL5_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 8.880e-84
Identity = 133/137 (97.08%), Postives = 133/137 (97.08%), Query Frame = 0
Query:    1 PKQQLTVFPRVTEPHILALAKIRPSVQAPPMMLVTVSVLDPEGRCVVRLNEDDPHRGNPHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTSPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNS 137
            P  QLTVFPRVTEPHILALA IRPS QAPPMMLVTVSVLDPEGRCVVRLNEDDPHRGNPHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTSPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNS
Sbjct:  465 PDIQLTVFPRVTEPHILALANIRPSAQAPPMMLVTVSVLDPEGRCVVRLNEDDPHRGNPHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTSPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNS 601          
BLAST of mRNA_Ecto-sp13_S_contig98355.21483.1 vs. uniprot
Match: A0A4D9CPB5_9STRA (GMC_OxRdtase_N domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CPB5_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 9.710e-12
Identity = 56/165 (33.94%), Postives = 79/165 (47.88%), Query Frame = 0
Query:    1 PKQQLTVFPRVTEPHILA----------------LAKIRPSVQAPPM-------MLVTVSVLDPEGRCVVRLNEDDPHRG-----NPHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTSPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNS 137
            P  QLTVFPR++EPH++                  A +  +   PP        MLVT+++LDP+ R  V L+  D   G       ++   + EG    LS++D  KL WGV  VR IA+TSP+ E  + E  PGP       D   E V L  WV+++ + NS
Sbjct:  534 PDLQLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHGPARVLEANVSASEGEGF---LSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGP-------DLVDEGV-LKKWVRKNKFVNS 687          
BLAST of mRNA_Ecto-sp13_S_contig98355.21483.1 vs. uniprot
Match: A0A7S0PU53_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PU53_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.090e-9
Identity = 54/153 (35.29%), Postives = 70/153 (45.75%), Query Frame = 0
Query:    1 PKQQLTVFPRVTEPHIL---------ALAKIRPSVQAP---PMMLVTVSVLDPEGRCVVRLNEDDPHRGN------------------PHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTSPLLEELRGEVYPGPG-VSGAADDTAGED 122
            P  QLTVFPRV EPH++           A    SVQ P     MLVTV++L PE R  V+ +  +  + N                  P         +   LS+LD K+LAWGV +VRRI   +PL  E   E++PG   V G  D+   ED
Sbjct:   59 PDLQLTVFPRVIEPHVIDRSHKLNQQRSANDGSSVQIPIESSAMLVTVALLQPEARYEVKTSRREKKKKNISTGVLTDMNHTFWGFDFPLPSVGLPPNKTSYLSDLDVKRLAWGVEEVRRIRSFAPLSRETEEELFPGSRIVDGLLDNHIKED 211          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig98355.21483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KCL5_9PHAE8.880e-8497.08GMC_OxRdtase_N domain-containing protein n=2 Tax=E... [more]
A0A4D9CPB5_9STRA9.710e-1233.94GMC_OxRdtase_N domain-containing protein n=4 Tax=M... [more]
A0A7S0PU53_9STRA2.090e-935.29Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.560.10coord: 4..136
e-value: 4.9E-6
score: 28.1
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 24..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig98355contigEcto-sp13_S_contig98355:2..412 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig98355.21483.1mRNA_Ecto-sp13_S_contig98355.21483.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig98355 2..412 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig98355.21483.1 ID=prot_Ecto-sp13_S_contig98355.21483.1|Name=mRNA_Ecto-sp13_S_contig98355.21483.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=137bp
PKQQLTVFPRVTEPHILALAKIRPSVQAPPMMLVTVSVLDPEGRCVVRLN
EDDPHRGNPHIERDQREGEPDPLSELDAKKLAWGVGQVRRIAQTSPLLEE
LRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNS
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