prot_Ecto-sp13_S_contig9834.21480.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9834.21480.1
Unique Nameprot_Ecto-sp13_S_contig9834.21480.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length135
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9834.21480.1 vs. uniprot
Match: D8LHJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ2_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 3.990e-8
Identity = 47/77 (61.04%), Postives = 51/77 (66.23%), Query Frame = 0 
Query:   26 GVEGVAPEDLSSTAA-GGTGVGHQGXXXXXXXXXXXXXXXXPGVFTTKKTTLLDDPDLQYSS-PVVSNGGVLRPTPQ 100
            G  G  PED SS AA GG+GVG++GXXXXXX          PG       +LLDDPDLQYSS PVVS GGVLRPTPQ
Sbjct:  193 GGMGGVPEDFSSAAAAGGSGVGYEGXXXXXXAVGDG-----PGGTAATTASLLDDPDLQYSSSPVVSTGGVLRPTPQ 264
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BLAST of mRNA_Ecto-sp13_S_contig9834.21480.1 vs. uniprot
Match: D8LHD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHD0_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 4.560e-8
Identity = 55/77 (71.43%), Postives = 56/77 (72.73%), Query Frame = 0 
Query:   26 GVEGVAPEDLSSTAAGGTGV--GHQGXXXXXXXXXXXXXXXXPGVFTTKKTTLLDDPDLQYSSPVVSNGGVLRPTPQ 100
            G+ G APEDLSSTAAGGTGV  G QGXXXXXXXXXXXXXXXX          L DDP LQY SP VS  GVLRPTPQ
Sbjct:   53 GMGGGAPEDLSSTAAGGTGVSLGRQGXXXXXXXXXXXXXXXXXXXXXXXXXXLPDDPGLQYRSPAVSTNGVLRPTPQ 129
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9834.21480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHJ2_ECTSI3.990e-861.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LHD0_ECTSI4.560e-871.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9834contigEcto-sp13_S_contig9834:611..3473 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9834.21480.1mRNA_Ecto-sp13_S_contig9834.21480.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9834 596..5234 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9834.21480.1 ID=prot_Ecto-sp13_S_contig9834.21480.1|Name=mRNA_Ecto-sp13_S_contig9834.21480.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp
MRLQAQDFRASTTLPPPFDASSTGSGVEGVAPEDLSSTAAGGTGVGHQGG
GGGNKGSSSGGGGDGPGVFTTKKTTLLDDPDLQYSSPVVSNGGVLRPTPQ
VSSSRAADPAVMMPASSPAVAEQRGSRNQEPIAM*
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