prot_Ecto-sp13_S_contig9827.21474.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9827.21474.1
Unique Nameprot_Ecto-sp13_S_contig9827.21474.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length114
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9827.21474.1 vs. uniprot
Match: D7G734_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G734_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 3.930e-66
Identity = 103/113 (91.15%), Postives = 108/113 (95.58%), Query Frame = 0 
Query:    1 MLLDQFLVADEFKLRYILFPQAFGVIYILFNVGWYYLAPDDDRLIYIILDWEDNTLVACIYAFGAILVGAPLFGLFHLGIFRLREKVYQNRLARSSKAAAEAQAIELKESDQA 113
            +LLDQFLVADEFKLRYILFPQAFGVIY+ FNVGWYYLAPDDDRLIYIILDWEDNTL ACIYAFGAILVGAPLFGL HLG+FRLRE VY NRLAR+SKAAAEAQ+IELKESDQA
Sbjct:   45 LLLDQFLVADEFKLRYILFPQAFGVIYLFFNVGWYYLAPDDDRLIYIILDWEDNTLGACIYAFGAILVGAPLFGLVHLGLFRLRESVYHNRLARTSKAAAEAQSIELKESDQA 157
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BLAST of mRNA_Ecto-sp13_S_contig9827.21474.1 vs. uniprot
Match: A0A6H5JSI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI9_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 6.210e-66
Identity = 106/113 (93.81%), Postives = 108/113 (95.58%), Query Frame = 0 
Query:    1 MLLDQFLVADEFKLRYILFPQAFGVIYILFNVGWYYLAPDDDRLIYIILDWEDNTLVACIYAFGAILVGAPLFGLFHLGIFRLREKVYQNRLARSSKAAAEAQAIELKESDQA 113
            MLLDQFLVADEFKLRY+LFPQAFGVIYI FNVGWYYLAPDDDRLIYIILDWEDNTL ACIYAFGAILVGAPLFGL H GIFRLRE+VY NRLARSSKAAAEAQAIELKESDQA
Sbjct:  170 MLLDQFLVADEFKLRYVLFPQAFGVIYIFFNVGWYYLAPDDDRLIYIILDWEDNTLGACIYAFGAILVGAPLFGLVHFGIFRLRERVYHNRLARSSKAAAEAQAIELKESDQA 282
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BLAST of mRNA_Ecto-sp13_S_contig9827.21474.1 vs. uniprot
Match: D7G733_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G733_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 9.770e-13
Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 0 
Query:    1 MLLDQFLVADEFKLRYILFPQAFGVIYILFNVGWYYLAPDDDRLIYIILDWEDNTLVACIYAFGAILVGAPLFGLFHLGIFRLREKVY 88
            MLLDQFL+A E K +Y      F V+YI +NV +YY    +DR+ + + DW++    AC++ F  +  G P F   H+ ++RLRE++Y
Sbjct:  180 MLLDQFLIATEMKFKYAWLGLYFFVVYIFYNVIYYYEHNVEDRVTFEVFDWDERPGRACLWVFLILAFGVPGFTALHVFVYRLRERMY 267
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9827.21474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G734_ECTSI3.930e-6691.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSI9_9PHAE6.210e-6693.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G733_ECTSI9.770e-1339.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12242UNCHARACTERIZEDcoord: 1..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..35
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 16..38
IPR039860Protein rolling stonePANTHERPTHR12242:SF1LD06593P-RELATEDcoord: 1..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9827contigEcto-sp13_S_contig9827:3361..4663 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9827.21474.1mRNA_Ecto-sp13_S_contig9827.21474.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9827 1397..5638 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9827.21474.1 ID=prot_Ecto-sp13_S_contig9827.21474.1|Name=mRNA_Ecto-sp13_S_contig9827.21474.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=114bp
MLLDQFLVADEFKLRYILFPQAFGVIYILFNVGWYYLAPDDDRLIYIILD
WEDNTLVACIYAFGAILVGAPLFGLFHLGIFRLREKVYQNRLARSSKAAA
EAQAIELKESDQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039860Rost