prot_Ecto-sp13_S_contig9826.21473.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9826.21473.1
Unique Nameprot_Ecto-sp13_S_contig9826.21473.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length311
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9826.21473.1 vs. uniprot
Match: A0A6H5KLJ1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLJ1_9PHAE)

HSP 1 Score: 546 bits (1406), Expect = 3.970e-192
Identity = 290/311 (93.25%), Postives = 294/311 (94.53%), Query Frame = 0 
Query:    1 MPRRLLAAVCAGAAALFLLHCGHCFTFVTTTSPVLSPRSTAYPRSRFAPSSSRGGITMSGSSNGRESYSWDEDVLDRAVKDMLVDRAVETVRHLWNETGGDIYGQWLDRFTARQNLGDDVISTMGWARFLIKMMREEPVEAVVIRTAKKDSPQVIEAQRKARLWILFSSPPCQPPWRHSVNQLSADWDAEEEEEMKVALDYPPQLKAVKRSVVVQPAELAKKLMDIREQLALEWREDLKNIEVENNEIVRLDNDRRRRAREAGPGYDEVEQGGXXXSRRRLTYDHGQAFGGDSSPLRSDNYETLVGYLTEI 311
            MPRRLLAAV AG AALFLL CG  FTFVTTTSPVLSPRST YP SRFAP S+RGGI+MSGSSNGRESYSWDEDVLDRAVKDMLVDRAVETVRHLWNETGGDIYGQWLDRFTARQNLGDDVISTMGWARFLIKMMREEPVEAVVIRTAKKDSPQVIEAQRKAR     + PP   PWRHSVNQLSADWDAEEEEEMKVALDYPPQLKAVKRSVVVQPAELAKKLMDIREQLALEWREDLKNIEVEN+EIVRLDNDRRRRAREAGPGYDEVEQGGXXXSRRRLTYDHGQAFGGDSSPLRSDNYETLVGYLTEI
Sbjct:    1 MPRRLLAAVFAGVAALFLLQCGDGFTFVTTTSPVLSPRSTVYPPSRFAPLSTRGGISMSGSSNGRESYSWDEDVLDRAVKDMLVDRAVETVRHLWNETGGDIYGQWLDRFTARQNLGDDVISTMGWARFLIKMMREEPVEAVVIRTAKKDSPQVIEAQRKARN---NARPPTLSPWRHSVNQLSADWDAEEEEEMKVALDYPPQLKAVKRSVVVQPAELAKKLMDIREQLALEWREDLKNIEVENDEIVRLDNDRRRRAREAGPGYDEVEQGGXXXSRRRLTYDHGQAFGGDSSPLRSDNYETLVGYLTEI 308
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BLAST of mRNA_Ecto-sp13_S_contig9826.21473.1 vs. uniprot
Match: A0A2V3J0R6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0R6_9FLOR)

HSP 1 Score: 55.5 bits (132), Expect = 4.370e-5
Identity = 39/96 (40.62%), Postives = 53/96 (55.21%), Query Frame = 0 
Query:  214 VQPAELAKKLMDIREQLALEWREDLKNIEVENNEIVRLDNDRRRRAREAGPGYDEVEQGGXXXSRRRLTYDHGQAFGGDSSPLRSDNYETLVGYLT 309
            V+P  LAK+++DIR+QLA EW  DL+ IE+EN EI R+       A E     DE +      S+R+L +D    F  D +PLR  NY  L   +T
Sbjct:  136 VEPFRLAKRILDIRKQLAAEWVGDLRCIEMENLEIQRM-------AIERALCSDEAQ----LESKRKLIFDS-DPFASDQTPLRYKNYHALKTLIT 219
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9826.21473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLJ1_9PHAE3.970e-19293.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2V3J0R6_9FLOR4.370e-540.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..311
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.774
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9826contigEcto-sp13_S_contig9826:265..5884 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9826.21473.1mRNA_Ecto-sp13_S_contig9826.21473.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9826 265..5884 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9826.21473.1 ID=prot_Ecto-sp13_S_contig9826.21473.1|Name=mRNA_Ecto-sp13_S_contig9826.21473.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=311bp
MPRRLLAAVCAGAAALFLLHCGHCFTFVTTTSPVLSPRSTAYPRSRFAPS
SSRGGITMSGSSNGRESYSWDEDVLDRAVKDMLVDRAVETVRHLWNETGG
DIYGQWLDRFTARQNLGDDVISTMGWARFLIKMMREEPVEAVVIRTAKKD
SPQVIEAQRKARLWILFSSPPCQPPWRHSVNQLSADWDAEEEEEMKVALD
YPPQLKAVKRSVVVQPAELAKKLMDIREQLALEWREDLKNIEVENNEIVR
LDNDRRRRAREAGPGYDEVEQGGGGGSRRRLTYDHGQAFGGDSSPLRSDN
YETLVGYLTEI
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