Homology
BLAST of mRNA_Ecto-sp13_S_contig9826.21473.1 vs. uniprot
Match:
A0A6H5KLJ1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLJ1_9PHAE)
HSP 1 Score: 546 bits (1406), Expect = 3.970e-192
Identity = 290/311 (93.25%), Postives = 294/311 (94.53%), Query Frame = 1
Query: 1 MPRRLLAAVCAGAAALFLLHCGHCFTFVTTTSPVLSPRSTAYPRSRFAPSSSRGGITMSGSSNGRESYSWDEDVLDRAVKDMLVDRAVETVRHLWNETGGDIYGQWLDRFTARQNLGDDVISTMGWARFLIKMMREEPVEAVVIRTAKKDSPQVIEAQRKARLWILFSSPPCQPPWRHSVNQLSADWDAEEEEEMKVALDYPPQLKAVKRSVVVQPAELAKKLMDIREQLALEWREDLKNIEVENNEIVRLDNDRRRRAREAGPGYDEVEQGGXXXSRRRLTYDHGQAFGGDSSPLRSDNYETLVGYLTEI 933
MPRRLLAAV AG AALFLL CG FTFVTTTSPVLSPRST YP SRFAP S+RGGI+MSGSSNGRESYSWDEDVLDRAVKDMLVDRAVETVRHLWNETGGDIYGQWLDRFTARQNLGDDVISTMGWARFLIKMMREEPVEAVVIRTAKKDSPQVIEAQRKAR + PP PWRHSVNQLSADWDAEEEEEMKVALDYPPQLKAVKRSVVVQPAELAKKLMDIREQLALEWREDLKNIEVEN+EIVRLDNDRRRRAREAGPGYDEVEQGGXXXSRRRLTYDHGQAFGGDSSPLRSDNYETLVGYLTEI
Sbjct: 1 MPRRLLAAVFAGVAALFLLQCGDGFTFVTTTSPVLSPRSTVYPPSRFAPLSTRGGISMSGSSNGRESYSWDEDVLDRAVKDMLVDRAVETVRHLWNETGGDIYGQWLDRFTARQNLGDDVISTMGWARFLIKMMREEPVEAVVIRTAKKDSPQVIEAQRKARN---NARPPTLSPWRHSVNQLSADWDAEEEEEMKVALDYPPQLKAVKRSVVVQPAELAKKLMDIREQLALEWREDLKNIEVENDEIVRLDNDRRRRAREAGPGYDEVEQGGXXXSRRRLTYDHGQAFGGDSSPLRSDNYETLVGYLTEI 308
BLAST of mRNA_Ecto-sp13_S_contig9826.21473.1 vs. uniprot
Match:
A0A2V3J0R6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0R6_9FLOR)
HSP 1 Score: 55.5 bits (132), Expect = 4.370e-5
Identity = 39/96 (40.62%), Postives = 53/96 (55.21%), Query Frame = 1
Query: 640 VQPAELAKKLMDIREQLALEWREDLKNIEVENNEIVRLDNDRRRRAREAGPGYDEVEQGGXXXSRRRLTYDHGQAFGGDSSPLRSDNYETLVGYLT 927
V+P LAK+++DIR+QLA EW DL+ IE+EN EI R+ A E DE + S+R+L +D F D +PLR NY L +T
Sbjct: 136 VEPFRLAKRILDIRKQLAAEWVGDLRCIEMENLEIQRM-------AIERALCSDEAQ----LESKRKLIFDS-DPFASDQTPLRYKNYHALKTLIT 219
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9826.21473.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 3.97e-192 / Id = 93.25 Expect = 4.37e-5 / Id = 40.63 Sequence A0A6H5KLJ1_9PHAE A0A2V3J0R6_9FLOR
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Stop 0
Start 1
Seed ortholog score 74.3
Seed ortholog evalue 1.1e-10
Seed eggNOG ortholog 2880.D8LEG6
Model size 933
Hectar predicted targeting category chloroplast
Exons 7
EggNOG OGs 2E04B@1,2S7JZ@2759
Ec32 ortholog description hypothetical protein
Ec32 ortholog Ec-18_002530.1
Cds size 933
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681464245.8597097-CDS-Ecto-sp13_S_contig9826:264..449 1681464245.8597097-CDS-Ecto-sp13_S_contig9826:264..449 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9826 265..449 +
1681464245.883544-CDS-Ecto-sp13_S_contig9826:1510..1623 1681464245.883544-CDS-Ecto-sp13_S_contig9826:1510..1623 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9826 1511..1623 +
1681464245.8982406-CDS-Ecto-sp13_S_contig9826:2573..2673 1681464245.8982406-CDS-Ecto-sp13_S_contig9826:2573..2673 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9826 2574..2673 +
1681464245.9079447-CDS-Ecto-sp13_S_contig9826:3207..3330 1681464245.9079447-CDS-Ecto-sp13_S_contig9826:3207..3330 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9826 3208..3330 +
1681464245.9174201-CDS-Ecto-sp13_S_contig9826:4121..4176 1681464245.9174201-CDS-Ecto-sp13_S_contig9826:4121..4176 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9826 4122..4176 +
1681464245.9292307-CDS-Ecto-sp13_S_contig9826:4754..4904 1681464245.9292307-CDS-Ecto-sp13_S_contig9826:4754..4904 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9826 4755..4904 +
1681464245.9400012-CDS-Ecto-sp13_S_contig9826:5677..5884 1681464245.9400012-CDS-Ecto-sp13_S_contig9826:5677..5884 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9826 5678..5884 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9826.21473.1
>prot_Ecto-sp13_S_contig9826.21473.1 ID=prot_Ecto-sp13_S_contig9826.21473.1|Name=mRNA_Ecto-sp13_S_contig9826.21473.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=311bp
MPRRLLAAVCAGAAALFLLHCGHCFTFVTTTSPVLSPRSTAYPRSRFAPS SSRGGITMSGSSNGRESYSWDEDVLDRAVKDMLVDRAVETVRHLWNETGG DIYGQWLDRFTARQNLGDDVISTMGWARFLIKMMREEPVEAVVIRTAKKD SPQVIEAQRKARLWILFSSPPCQPPWRHSVNQLSADWDAEEEEEMKVALD YPPQLKAVKRSVVVQPAELAKKLMDIREQLALEWREDLKNIEVENNEIVR LDNDRRRRAREAGPGYDEVEQGGGGGSRRRLTYDHGQAFGGDSSPLRSDN YETLVGYLTEI back to top mRNA from alignment at Ecto-sp13_S_contig9826:265..5884+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9826.21473.1 ID=mRNA_Ecto-sp13_S_contig9826.21473.1|Name=mRNA_Ecto-sp13_S_contig9826.21473.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5620bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9826:265..5884+ (Ectocarpus species13 EcNAP12_S_4_19m)ATGCCCCGCCGTCTTCTGGCCGCTGTTTGCGCCGGCGCTGCTGCTCTGTT
TCTTCTGCATTGCGGCCATTGCTTTACCTTCGTCACTACAACTTCGCCCG
TGCTCTCGCCCCGGTCAACGGCGTACCCTCGGAGCAGATTTGCACCGTCT
AGTAGTAGAGGCGGCATCACGATGTCTGGATCAAG GTGAGGGAGAGGACA
GTAATCGTAGCAGTTAGTGCTTGAAGGTGCGAGAGATCTGTGCGTCTTGG
TAAGCATCTTGGTGACGTTGGGGCTTTATTTTGAATTCCGTTTATCCCGC
CGCATCTCCGCAACCAGCTGTGCAGATCCCAACCTCGAGCCCAACCATCC
ACCACCAGCTTCGTGCTCCACGGAGAAGGCCGCTCGTCAACCCTCGCCAG
CTACTTCCACACTCTCCCAATGAGTTGGGCTTCGAGTGTAGAAATTATGG
TGATTGTCGTGCTGCCATATTTTCAATACTTATTCTCTCCAAGTCTCTCG
GAAAAAATGATACGATCGGGATTCGAAGTCTTTCAGCAGATACTTCTTGT
AACATACCGTACTAATTAGTAGGACACAGCAGCACTTCTCCGTTCACCTG
GACAACAGTTGACGCACAGCCGCCGGCTGCTGACGTGCCGGTTTTTCACG
CGTGTCCACTCGCCTCCGGCACCATAAGGTGTGCCTACATCCAGCCGTAC
GTCGGCATCCAGCCGTACGTCGGCAGGATGCTCAGAAACACGCCCAAACG
AATCTCAAATCAGTTCGTCGTTGGTCTCTCGAACCTGTCTAAACCTTGAT
CGCGAGAGAGAGACAGTCAGCTGTCTGTATTGTACACCTCTCACCCTCTA
CGAGTGTAGACTACCTCGGGCGGTTTCTTCGCATTCCATCTTCAGCACCG
TTCAAGAGGGAGGGCCCACAACAGCAGTAGCCCCTACCCGTAAGCGGGCG
CTTGTATATCGTCATTAATGTGGTTGCACACGTCTGCTACGCGGATCTGC
TGGCTGTGGAAGTGAGAAGCACTTCTGGCCGAACACCGCGCGGGAGACAA
CAACAAAAAAACGTTCCGCCGATGTGCGCATAACGCGGCCCATAGCTAGG
GATGTAAGTTGAATCGATGGTTTTCGTTTCCCGCGCTAGCTCACTACCTC
TTCTTGTCAAAGCATTCGATATCCAGTTCCGTTCCACTGTGCTCGCGACC
ACCAACCATGTGCTGGTTTTCGTTTTTCGCCATCGGGTTATGGCAGCAAC
GGCCGCGAGAGCTATAGCTGGGACGAAGACGTGCTCGATAGAGCGGTGAA
GGACATGCTTGTCGACAGGGCGGTGGAGACGGTGCGACACCTGTGGAATG
AGACCGGCG GTGAGAGCCTGCTTATTATTATTTTTTTAATATGACACAAC
GAATCCATCTCTATCTAAGAAGAGAGTCCAAGACAGATTAGCATTGAATC
CATAGCGTCAGTGAAGGCTACCTGTGTTTCCACGATTTCCCGAGCAGCAT
ACAGCGGCATCTCCCCCGTGGGTAACAGGGTCAACAACAAAGTGTGGTAG
CTGTTTTGTGCATCCATCTACATGTTATGCTCTTTTTGTTTCATCGATTT
GTCACGTACGTATGCAGCGATTTCACGAGGCGAGAGGAACGAACGAGCTC
TCTGCTTGTGGAGAGACTGGAGTACCGCCTGCGTATATACAACTCGTCGA
GGGTATACCGATTCTGGCCCGTGAACGTTGAGATCAGCGTATTATGCGGT
ATCTCAGAGCGTACCTTGTTGTCATCGTAGCTTCTGTTGTTTCCGTTACC
AGCGCATGACGGAACACTCTGGCATTGGCGAAGTATTACCCGACGTTCTT
CCTGACTCTCTCCCTCTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCTCTC
TGTCTCTGTCTCTGTCTCACTTACACACGCTTAGTTATGCAGCCGGCCGG
CGCGGCCAATGCTTTGTGACAAGGATTTTGCTTTGCTCACCCGTATGTCT
TGGAACTTTCATTAGTACGGCTCGCCTCGTTGGCATGGGTGTTCTGTGTG
TAGAGAACACACGCTCATCACTTCACACCAGCTCTCCGCCTACCCTCCTC
CATCAATCAATCCCCCCTTTTTTCATGTATGTATGCATGCATGCAGGAGA
CACCCACCCACCCCCCGCTGTCTTTCCTTTTTTATCGGTCCCCCTCGTTT
TGTTCTCATGTATGTATGCCTGTGGGGGACATCCATCCACCCCCCTCTCT
GCTTCCCTACCTGTCGGTCTCCCTCCTTTTGTTGTTCATGGATGCTTGCA
TGCGTGCAGGGGATATCTACGGTCAGTGGTTGGACCGTTTCACCGCCAGG
CAGAACCTAGGCGATGACGTCATTTCGACCATGGGCTGGGCGCGCTTCCT
CATCAAGAT GTAAGAGCTGTCGCCGACCATGGGGCGCGGGAGGGGCGGCG
GGAGAAGGGGCACACAAATGACAGACAAAAGCAAGCAACATCCACGTTTT
TTTTTGTGTGGCAAATTGCGTTTTGTTACCTTTCATGTCATCTACATCCC
ACTCCTGCCTGTTTCTCTGTTGAAACTGTCGGTATTTCATTTTGTTTTCT
GTTCTGTTTCGTGTAGTACGAACCAGCTGCCGAAGTTCCTTGGGACGGAG
ATTTTTTGTGTACTTTTACGGCGTTACAAGTCTAATGCTACACAGCGGAA
GGCACCAGTGGCCGTTCCTCCTGTATTTCATACCTTACACTGGTACGTAA
AGTCTTCCTGCTTCTTGCGCGTTCGGCAATCGTCAGTAAAAGTTACACCG
TCCCTACTCCACGGGGTCGCGTAAAGTGATAGACCCCTTGCCTACATCCT
GTCTGCCGGCCCCCCTGCCTTTCGCGCGCCCCGTACGTGCGCTATTGTTG
TTACTGTTGTTGTCGCCCTTTTTCGTTGCATTTCGGGGCTTAGGATGAGA
GAGGAACCGGTGGAAGCGGTTGTGATCAGGACGGCGAAGAAGGACAGCCC
CCAAGTTATCGAGGCGCAACGCAAGGCACGACTCTGGATACTTTTTTCCT
CGCCGCCATGCCAACC GTAATGTCTTGCCCTTGGTGCCTTTACCCTCTAC
CCTCTTCCTCTCTATCCGTCTTGTACACATGCGCCAAAGTACTTAGATTC
CCGGTCACGCAAGAGGAACGTACCGCCCACCCTCTCCCCTGCCCCCGAAT
AGTACTACCATCCGCGCTGCATTGTTGACTTTTGATAATTCAGAGCCAAA
GAAGTGAGTCCACTCCGTCTTTTAGCTCTTGTGCGAGAGTCACCTCCGAG
TGAGCACAATCGACATTCGCATACCATGTCTTCCGGGATTATTTTTTGGT
GGCGAGGAAGGGGATAGGTTTCACAGCAGCACATTGTTGTCTGAGATTTT
TTTCTCTTGGCCGATGGTACCAACGGTTGAGTTGTGACGGGTGCCGTTTA
GATCAATGCTGGCTGTTTGTTTCGTTCTGGAGGCCTGTTGGGTCAAAGGC
CACACGTCGGTGACGGGCCGACAGGAACCAACCCTTTCCTCTGACGCGAA
TCGCCAGACTGACACACACCGGTTGAGCGCTATATCGCCGTGTCTGACGC
GTCTGCGAAGCCCGACATGCCCCCCCGATGTGCTCTGAACGATTCCCAGG
ATCTAGTGTTCAAAGGATCTAGTGTTCAAATTTCCTGCGAGTCACGGATG
ATACCTTCCGAGCACACATCCCTTGCCACACACAGGCATATACCTCCCCC
CCCCCCCCCCCTCTACTGCGTGTACGCATGACAATACCTTGTGGCAACCC
CCCCCTTGTCCCTGCCCCATTCTCCCCCCAGAATAACGCCCGTCCACCGA
CGCTGAGTCCGTGGCGACATTCCGTAAATCAGCTGTCTGCGGACTGGGAC
GCCGAGGAAGAG GTGGGGGTTTGAGTCGCGCCAACGCCAGGCCGTGGTTG
ACGTACAAAGAGCGCCGATCACCCGCAAGAGCTTTGTTCTTCTACAGTTT
GACGGGGAACAATTTAAGCTTGGAAAATAGCTCAGACATCGAGCAGTAGC
TCACGTTTTTCGTGGTGTAATCATGATCAAGAGTCCATTTTTGTGTACGT
GGTCGCTGTTTGACCGATCGATGCGACATCTGATGCGAGGCAGGGCACCT
TGCCCCCTCCTAGTCAGAGGAAGAATGTATCCTGCGGGACCCCCTTGACC
TCGAAGCTTCCACCTGCTACAAGAGTGTGGCCAAACAGAATGGACTCGGC
TCCAGGCCTGCTTGTGTCTTTGGCCACTTGACTACCAAAGAACTTGGGGG
AACCGTGTGCGGATGGACAATGAACACTCTCCATATCCGACTCTGCTCCG
TCCCGATACTTTTCGGAACAGACTGTTCGAGAAATTGGTCCAATGCATGA
TACTGAAGCCCCCTTCCCAATCTCCCAGGCACGATGCAGGTAGGATGACC
CCCCCCCCCCCCCCTCACACAATCACTGCTACGATGGTAGGAGGAGATGA
AGGTGGCCCTGGACTATCCCCCTCAGCTGAAGGCCGTTAAGAGGAGCGTG
GTCGTGCAGCCGGCGGAGCTAGCGAAAAAGCTCATGGACATCCGGGAACA
GCTAGCCCTGGAGTGGCGGGAAGACTTGAAGAACATCGAG GTGTGTGCGG
TGCGGCAGCGGAACAAGCAACACTCACTTGCAAAGACCTTAACACATACC
GTCGATCTGAGCATTGTCTGGAAAGGATAACTAAGTCTTTGCTGTGTGCG
TATTTCTTTCTGAGAAACTGGCTGTAAAAGTCTCGGTTTGACCGCGCTTT
GTCGGAGAACGTATCACCCGCCCGGTTGCCGCAAGCTGACGTGATGAGCG
TTGGGACGAGTCGTCCTTATGTCTCACATGGAGTACCGACCCGCCTCAGA
CATGAGGATGGTGTCGAAGACGAGGACGCCTGCTTGTTGTTTCGTTTTGA
GCGGCCCGATCTCGTGGGTGTCACGGCCAGCCTTGTGTCTCGTGTTCGTC
GCAGTAGACGCGCTGCTGTCTTTCGCGTCCGCCGAAAGTGTGCTGGGATC
GCTGCTGTGTGTTTCGCCTCTAGTTAGCGGTTGATACCCGATCGGCGACT
GTTTGTGTTTGGGGTCCTGCTTCGCTAAAAAAAAAGACAGAAAAAATGCT
TTTGGCTCGGGGCTAGTCTGGGATGAAGGGCCTTGAAACGGAGGAGGCCG
CAACTACCATTTTCAGCACCATGCTTCTGTCATCCTCACGTTTGGGGGAG
GAGGGAGGGTAGCGTCTCATCTCTCCTCTTTCCTGCCCCAATTTATGGCT
GTTTTCTTCTTCTTCCTGGCTGTTCACCGCTCGCTGCCCTCTTGAGTGCT
GCCGCCGCTGCTGCCGCCACTCGTAAATCGCAAATCGTGAATCATGGAAA
AAAAAAAAATCAGGTCGAGAACAACGAAATCGTCCGCCTGGACAACGACA
GACGGAGGAGAGCCAGAGAGGCGGGGCCCGGGTACGACGAGGTGGAGCAG
GGCGGCGGCGGCGGCAGCCGCAGGAGGTTGACGTACGACCACGGGCAAGC
CTTCGGAGGGGACAGCAGCCCCCTCCGCTCCGACAACTACGAGACGCTGG
TCGGCTACTTGACGGAGATC back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9826:265..5884+
>mRNA_Ecto-sp13_S_contig9826.21473.1 ID=mRNA_Ecto-sp13_S_contig9826.21473.1|Name=mRNA_Ecto-sp13_S_contig9826.21473.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=933bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9826:265..5884+ (Ectocarpus species13 EcNAP12_S_4_19m) ATGCCCCGCCGTCTTCTGGCCGCTGTTTGCGCCGGCGCTGCTGCTCTGTT TCTTCTGCATTGCGGCCATTGCTTTACCTTCGTCACTACAACTTCGCCCG TGCTCTCGCCCCGGTCAACGGCGTACCCTCGGAGCAGATTTGCACCGTCT AGTAGTAGAGGCGGCATCACGATGTCTGGATCAAGCAACGGCCGCGAGAG CTATAGCTGGGACGAAGACGTGCTCGATAGAGCGGTGAAGGACATGCTTG TCGACAGGGCGGTGGAGACGGTGCGACACCTGTGGAATGAGACCGGCGGG GATATCTACGGTCAGTGGTTGGACCGTTTCACCGCCAGGCAGAACCTAGG CGATGACGTCATTTCGACCATGGGCTGGGCGCGCTTCCTCATCAAGATGA TGAGAGAGGAACCGGTGGAAGCGGTTGTGATCAGGACGGCGAAGAAGGAC AGCCCCCAAGTTATCGAGGCGCAACGCAAGGCACGACTCTGGATACTTTT TTCCTCGCCGCCATGCCAACCTCCGTGGCGACATTCCGTAAATCAGCTGT CTGCGGACTGGGACGCCGAGGAAGAGGAGGAGATGAAGGTGGCCCTGGAC TATCCCCCTCAGCTGAAGGCCGTTAAGAGGAGCGTGGTCGTGCAGCCGGC GGAGCTAGCGAAAAAGCTCATGGACATCCGGGAACAGCTAGCCCTGGAGT GGCGGGAAGACTTGAAGAACATCGAGGTCGAGAACAACGAAATCGTCCGC CTGGACAACGACAGACGGAGGAGAGCCAGAGAGGCGGGGCCCGGGTACGA CGAGGTGGAGCAGGGCGGCGGCGGCGGCAGCCGCAGGAGGTTGACGTACG ACCACGGGCAAGCCTTCGGAGGGGACAGCAGCCCCCTCCGCTCCGACAAC TACGAGACGCTGGTCGGCTACTTGACGGAGATC back to top