prot_Ecto-sp13_S_contig9808.21461.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9808.21461.1
Unique Nameprot_Ecto-sp13_S_contig9808.21461.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length205
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9808.21461.1 vs. uniprot
Match: D7FTC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC5_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 2.710e-71
Identity = 156/197 (79.19%), Postives = 165/197 (83.76%), Query Frame = 0 
Query:    1 RRSSALPTAVTNSPCSADGAASPATFSDDLDGATLCADMDPIVTPSMLGMRHQQAASSPAQIVPTRGEGAIVGGAPVAGTPXXXXXXXXXXXSFATVFPSAAGPWEAGSRPPASSRGGFPGLGEGXXXXXXXXXIDALEAVLNGXXXXXXXXXXXXXSNFVQLDVLADLPEVKSAYLLSQAYEEAYDGKGDNSHNRG 197
            RRS+A PTAVTNSPCSADGAAS A FSDDLDGATLCADMDPIVTPSMLGMR QQAAS  +Q+VPT G G +VG APVAGTP           SFATVFP+AAGPWEAGS PPA SRGGFPGLGE    XXXXXX DAL+AVLNGXXXXXXXXXXX  S FVQLDVLADLPEVKS YLLSQA+EEAYDGKG++SHNRG
Sbjct:  522 RRSTAPPTAVTNSPCSADGAASLAAFSDDLDGATLCADMDPIVTPSMLGMRRQQAASLSSQMVPTMGGGLMVGXAPVAGTPPPASTVSSSWSSFATVFPNAAGPWEAGSGPPACSRGGFPGLGE-VGGXXXXXXXDALDAVLNGXXXXXXXXXXXG-SKFVQLDVLADLPEVKSTYLLSQAFEEAYDGKGNSSHNRG 716
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BLAST of mRNA_Ecto-sp13_S_contig9808.21461.1 vs. uniprot
Match: A0A6H5K8X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X8_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 7.620e-69
Identity = 155/204 (75.98%), Postives = 162/204 (79.41%), Query Frame = 0 
Query:    2 RSSALPTAVTNSPCSADGAASPATFSDDLDGATLCADMDPIVTPSMLGMRHQQAASSPAQIVPTRGEGAIVGGAPVAGTPXXXXXXXXXXXSFATVFPSAAGPWEAGSRPPASSRGGFPGLGEGXXXXXXXXXIDALEAVLNGXXXXXXXXXXXXXSNFVQLDVLADLPEVKSAYLLSQAYEEAYDGKGDNSHNRGGXXXGNDR 205
            RS A PTAV+NSPC+ADGAASP TFSDDLDGATLCADMDPIVTPSML MRHQQAA+ PAQ+VP+RG              XXXXXXXXXXXS ATV P+AAGPWEAGSRP ASSRGGFPGL EG         IDALEAVLNG XXXXXXX     SNFVQLDVLADLPEVKS YLLSQAYEEAYDGKG+NSHNRGG   GNDR
Sbjct:  361 RSPAPPTAVSNSPCTADGAASPVTFSDDLDGATLCADMDPIVTPSMLDMRHQQAAALPAQMVPSRGGXXXXXXXXXXXXXXXXXXXXXXXXSLATVLPNAAGPWEAGSRPSASSRGGFPGLVEGGGGGS----IDALEAVLNGEXXXXXXXGG---SNFVQLDVLADLPEVKSTYLLSQAYEEAYDGKGNNSHNRGGGGVGNDR 557
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9808.21461.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTC5_ECTSI2.710e-7179.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8X8_9PHAE7.620e-6975.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9808contigEcto-sp13_S_contig9808:1718..2332 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9808.21461.1mRNA_Ecto-sp13_S_contig9808.21461.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9808 1718..2332 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9808.21461.1 ID=prot_Ecto-sp13_S_contig9808.21461.1|Name=mRNA_Ecto-sp13_S_contig9808.21461.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=205bp
RRSSALPTAVTNSPCSADGAASPATFSDDLDGATLCADMDPIVTPSMLGM
RHQQAASSPAQIVPTRGEGAIVGGAPVAGTPPPAAAGSSSSSSFATVFPS
AAGPWEAGSRPPASSRGGFPGLGEGGGGGGGGGSIDALEAVLNGEDDDDD
DDDDDGGSNFVQLDVLADLPEVKSAYLLSQAYEEAYDGKGDNSHNRGGGG
GGNDR
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