prot_Ecto-sp13_S_contig12596.2143.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12596.2143.1
Unique Nameprot_Ecto-sp13_S_contig12596.2143.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length276
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12596.2143.1 vs. uniprot
Match: D8LG76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG76_ECTSI)

HSP 1 Score: 397 bits (1019), Expect = 3.170e-136
Identity = 241/275 (87.64%), Postives = 243/275 (88.36%), Query Frame = 0 
Query:    1 MSSPSESDGSSAWNDTDAQSSNPPAFXXXXXXXXXXXXXXX-------TAARSAYSSGGTVQSGRHGTSPVVREVDVYDGVSSEASMSSAGTEAASRVQSEMTGTYDHDTAAGGSMASFQGGGGDSGRGHRRPGSGLSDAPSPGQRMLGYHEGYGSSRSSIVSRVAGAESEMGSHRLVPPQDSWQNSPGPGGGASAGGGIERVLSGETTDSSILEQQARDRHGSGQQEDGDFGRVWLADRAHARQFDDADEDRGRSGVRGGDGCRVGFPGVRACV 268
            MSSPSESD SSAWNDTDAQ       XXXXXXXXXXXXXXX       TAARSAYSSGGTVQSGRHGTSPVVREVDVYD VSSEASMSSAGTEAASRVQSE+TGTYDHDTAAGGS  SFQ GGGDSGRGHRRPGSG S APSPGQRMLGY + YGSSRSSIVSRVAGAESEMGSHRLVPPQDSWQNSPGPGGGA AGGGIERVLSGETTDSSILEQQARDRHGSGQQEDGDFGRVWLADRAHARQFDDADEDRGRSGVRGG     GF   RACV
Sbjct:   28 MSSPSESDRSSAWNDTDAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAARSAYSSGGTVQSGRHGTSPVVREVDVYDDVSSEASMSSAGTEAASRVQSEVTGTYDHDTAAGGSTTSFQAGGGDSGRGHRRPGSGASGAPSPGQRMLGYQQAYGSSRSSIVSRVAGAESEMGSHRLVPPQDSWQNSPGPGGGALAGGGIERVLSGETTDSSILEQQARDRHGSGQQEDGDFGRVWLADRAHARQFDDADEDRGRSGVRGGVVAEFGF---RACV 299
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BLAST of mRNA_Ecto-sp13_S_contig12596.2143.1 vs. uniprot
Match: A0A6H5KYK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYK9_9PHAE)

HSP 1 Score: 365 bits (938), Expect = 3.000e-112
Identity = 223/247 (90.28%), Postives = 225/247 (91.09%), Query Frame = 0 
Query:    5 SESDGSSAWNDTDAQSSNPPAFXXXXXXXXXXXXXXX--TAARSAYSSGGTVQSGRHGTSPVVREVDVYDGVSSEASMSSAGTEAASRVQSEMTGT--YDHDTAAGGSMASFQGGGGDSGRGHRRPGSGLSDAPSPGQRMLGYHEGYGSSRSSIVSRVAGAESEMGSHRLVPPQDSWQNSPGPGGGASAGGGIERVLSGETTDSSILEQQARDRHGSGQQEDGDFGRVWLADRAHARQFDDADEDRG 247
            SESD SSAWNDTDAQS      XXXXXXXXXXXXXXX  TAARSAYSSGGTVQSGRHGTSPVVREVDVYDGVSSEASMSSAGTEAASRVQSEMT T  YDHDTAAGGS ASFQGGGGDSGR HRRPG G+   PSP Q MLGY +GYGSSRSSIVSRVAGAESEMGSHRLVPPQDSWQNSPGPGGGASA GGIERVLSGETTDSSILEQQARDRHGSGQQEDGDFGRVWLADRAHARQFDDADEDRG
Sbjct: 2278 SESDRSSAWNDTDAQSXXXXXXXXXXXXXXXXXXXXXXXTAARSAYSSGGTVQSGRHGTSPVVREVDVYDGVSSEASMSSAGTEAASRVQSEMTSTSTYDHDTAAGGSTASFQGGGGDSGRAHRRPGPGVRVPPSPSQPMLGYQQGYGSSRSSIVSRVAGAESEMGSHRLVPPQDSWQNSPGPGGGASAEGGIERVLSGETTDSSILEQQARDRHGSGQQEDGDFGRVWLADRAHARQFDDADEDRG 2524
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12596.2143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LG76_ECTSI3.170e-13687.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYK9_9PHAE3.000e-11290.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12596contigEcto-sp13_S_contig12596:1657..2926 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12596.2143.1mRNA_Ecto-sp13_S_contig12596.2143.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12596 1588..3015 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12596.2143.1 ID=prot_Ecto-sp13_S_contig12596.2143.1|Name=mRNA_Ecto-sp13_S_contig12596.2143.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=276bp
MSSPSESDGSSAWNDTDAQSSNPPAFGGGGGGGNYAAAQFTTAARSAYSS
GGTVQSGRHGTSPVVREVDVYDGVSSEASMSSAGTEAASRVQSEMTGTYD
HDTAAGGSMASFQGGGGDSGRGHRRPGSGLSDAPSPGQRMLGYHEGYGSS
RSSIVSRVAGAESEMGSHRLVPPQDSWQNSPGPGGGASAGGGIERVLSGE
TTDSSILEQQARDRHGSGQQEDGDFGRVWLADRAHARQFDDADEDRGRSG
VRGGDGCRVGFPGVRACVTIKRVVH*
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