prot_Ecto-sp13_S_contig9771.21423.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9771.21423.1
Unique Nameprot_Ecto-sp13_S_contig9771.21423.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length243
Homology
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: D7FKD9_ECTSI (MutS protein homolog 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD9_ECTSI)

HSP 1 Score: 455 bits (1171), Expect = 1.490e-155
Identity = 238/243 (97.94%), Postives = 240/243 (98.77%), Query Frame = 0
Query:    1 MRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHLSRKGRKCLFTLHFHEIFSHGLVRVSGPDELHTDLKDVSVFRMDVHVPSPPKAQESQ 243
            MRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQ+AQM RTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHLSRKGRKCLFTLHFHEIFSH LV+VSGPDELHTDLKDVSVFRMDVHVPSPPKA ESQ
Sbjct:  354 MRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQVAQMARTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHLSRKGRKCLFTLHFHEIFSHDLVKVSGPDELHTDLKDVSVFRMDVHVPSPPKAPESQ 596          
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: A0A482T1K6_9ARCH (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T1K6_9ARCH)

HSP 1 Score: 206 bits (525), Expect = 5.070e-61
Identity = 110/228 (48.25%), Postives = 157/228 (68.86%), Query Frame = 0
Query:    4 LEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHLSRKGRKCLFTLHFHEI-FSHGLVRVSGPDELHTDLKDVSVFRMD 230
            LE+ L+  EG++  A + +A LDA ++L  +A +     P + +D VI+IK GRH LQE+ VD F+PND+ +     VALI+G N SGKS+YLKQVG+ VYLAH+GSFVP E+A+IGLTD+I TRI T E+ S+PQSSFT+D+ Q++++++  T RSL LIDEFGKGT PADG+ L+AA++   + +    +F LHF EI F H + + S        +  ++ FRM+
Sbjct:   98 LEEGLLDLEGSIVQATTSIATLDAFISLGIMARECNLSAPHIHDDPVIVIKGGRHLLQELTVDSFVPNDSLLTPEKNVALISGPNSSGKSIYLKQVGIIVYLAHIGSFVPCEQAIIGLTDKILTRIKTTESVSVPQSSFTMDLTQMSKILKYRTDRSLCLIDEFGKGTNPADGMALLAAIIEDFTERKSNAIFVLHFTEILFDHAIKQES--------MDSINCFRME 317          
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: A0A2R6WVC4_MARPO (DNA_MISMATCH_REPAIR_2 domain-containing protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WVC4_MARPO)

HSP 1 Score: 205 bits (521), Expect = 2.270e-59
Identity = 110/192 (57.29%), Postives = 141/192 (73.44%), Query Frame = 0
Query:   15 LHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAA-LLRHLSRKGR-KCLFTLHFHEIF 204
            L +AA V AE+D   ALA  A D+G+VRP++ ED+V++I+NGRH LQEM  + ++PNDT I    R+ ++TG N SGKS+Y KQV +  +LAH+GSFVPA+KA+IG+ DRIFTR+A+ ET  + QSSF ID+NQI+ M+R ST RSL LIDEFGKGT  +DGIGL+ A LL   SRK   K L   HF EIF
Sbjct:  217 LESAAKVAAEIDCVTALAIAARDYGYVRPDLREDDVLIIENGRHVLQEMTANRYVPNDTHITKEGRINIVTGPNYSGKSIYAKQVALITFLAHIGSFVPADKAIIGIQDRIFTRVASKETVGISQSSFMIDLNQISVMLRHSTSRSLCLIDEFGKGTLTSDGIGLLCATLLEFASRKSPPKVLACTHFSEIF 408          
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: A0A1X7UDR7_AMPQE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UDR7_AMPQE)

HSP 1 Score: 206 bits (525), Expect = 5.220e-58
Identity = 109/214 (50.93%), Postives = 150/214 (70.09%), Query Frame = 0
Query:    1 MRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGSR--VALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHLSRKGRKC---LFTLHFHEIFSHGLV 209
            M  L+  L+   GAL +      ELD  ++++ +A +  FV+PE+ EDNVI IKNGRHPLQE+ V+ F+PNDT ++D +   + ++TGAN SGKSVYL QVG+ VYLAH+GSFVPAE A IG+ D IFTR+ T E+ S+ QS+F ID+NQ++  V+  T RSL+L+DEFGKGTA  DG+ L+AA+LRH  +K  +C   L + HFH +    L+
Sbjct:  518 MHRLQSVLMEHSGALISVIECTTELDCLVSMSKLAKEHNFVKPELTEDNVIYIKNGRHPLQELCVNTFVPNDT-VSDSAHGTMKILTGANASGKSVYLTQVGLIVYLAHIGSFVPAEAAKIGIMDGIFTRVQTRESVSIAQSTFLIDINQVSTAVQCGTHRSLILLDEFGKGTATVDGLALLAAVLRHWLKKEEECPHILVSTHFHSLLDQKLL 730          
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: I0YMF5_COCSC (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YMF5_COCSC)

HSP 1 Score: 206 bits (525), Expect = 6.220e-58
Identity = 113/213 (53.05%), Postives = 147/213 (69.01%), Query Frame = 0
Query:    3 ELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFI-ADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHLS--RKGRKCLFTLHFHEIFSHGLVRVS 212
            EL   L A   +L  A ++ AE+D  L+LA  A DFG+ RP + +DNV+ IK GRHPL E+ VD FIPNDT + AD +RV +ITG N SGKS Y KQV + V+LAH+GSFVPA +A +GLTDRIFTRI T E  S+PQS+F ID++Q++ M+R + PRSL +IDEFGKGT  ADG GL+ A+LRH +  R   + +   HF E+     +R S
Sbjct:  536 ELIQRLAAFGPSLSRAVALAAEVDCLLSLAQCARDFGYSRPRLTQDNVLHIKQGRHPLAELVVDRFIPNDTAMHADSARVQVITGPNYSGKSCYAKQVALIVFLAHIGSFVPAAEATVGLTDRIFTRIVTTEAQSVPQSAFMIDMSQVSNMLRHAGPRSLCIIDEFGKGTLAADGFGLLCAVLRHFTAQRPSPRVIAVTHFIEVLHEAYLRRS 748          
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: A0A2R6WVE1_MARPO (DNA_MISMATCH_REPAIR_2 domain-containing protein n=5 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WVE1_MARPO)

HSP 1 Score: 205 bits (521), Expect = 9.010e-58
Identity = 110/192 (57.29%), Postives = 141/192 (73.44%), Query Frame = 0
Query:   15 LHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAA-LLRHLSRKGR-KCLFTLHFHEIF 204
            L +AA V AE+D   ALA  A D+G+VRP++ ED+V++I+NGRH LQEM  + ++PNDT I    R+ ++TG N SGKS+Y KQV +  +LAH+GSFVPA+KA+IG+ DRIFTR+A+ ET  + QSSF ID+NQI+ M+R ST RSL LIDEFGKGT  +DGIGL+ A LL   SRK   K L   HF EIF
Sbjct:  549 LESAAKVAAEIDCVTALAIAARDYGYVRPDLREDDVLIIENGRHVLQEMTANRYVPNDTHITKEGRINIVTGPNYSGKSIYAKQVALITFLAHIGSFVPADKAIIGIQDRIFTRVASKETVGISQSSFMIDLNQISVMLRHSTSRSLCLIDEFGKGTLTSDGIGLLCATLLEFASRKSPPKVLACTHFSEIF 740          
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: D8R9G5_SELML (DNA_MISMATCH_REPAIR_2 domain-containing protein (Fragment) n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R9G5_SELML)

HSP 1 Score: 200 bits (509), Expect = 1.490e-57
Identity = 101/205 (49.27%), Postives = 149/205 (72.68%), Query Frame = 0
Query:    1 MRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHL--SRKGRKCLFTLHFHEI 203
            ++ELE  +   E A+  +A + A+LD  +++A  AG++ + RP +VED++++IKNGRHPLQE+ VD F+PN+T I +  R+ ++TG N SGKSVY+KQV + V+L+H+GSFVPA++AVIG+TDRIFTR+   +++ +PQS+F  D++QI+ M+R +T +SL LIDEFG GT  ADGIGL+ + L H   S    K L   HF E+
Sbjct:  213 LKELESKVQKYEPAVRYSADLTAQLDCLVSMAISAGEYNYNRPRLVEDDILIIKNGRHPLQELTVDTFVPNNTQIEEKGRICVVTGPNYSGKSVYIKQVALIVFLSHIGSFVPADEAVIGITDRIFTRLPCKQSTKVPQSTFMTDLHQISVMLRYATSKSLCLIDEFGSGTMSADGIGLLCSTLHHFAGSESSPKILACTHFSEL 417          
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: D8SEG8_SELML (DNA_MISMATCH_REPAIR_2 domain-containing protein (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SEG8_SELML)

HSP 1 Score: 199 bits (507), Expect = 2.930e-57
Identity = 101/205 (49.27%), Postives = 149/205 (72.68%), Query Frame = 0
Query:    1 MRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHL--SRKGRKCLFTLHFHEI 203
            ++ELE  +   E A+  +A + A+LD  +++A  AG++ + RP +VED++++IKNGRHPLQE+ VD F+PN+T I +  R++++TG N SGKSVY+KQV + V+L+H+GSFVPA++AVIG TDRIFTR+   +++ +PQS+F  D++QI+ M+R +T +SL LIDEFG GT  ADGIGL+ + L H   S    K L   HF E+
Sbjct:  213 LKELESKVQKYEPAVRYSADLTAQLDCLVSMAISAGEYNYNRPRLVEDDILIIKNGRHPLQELTVDTFVPNNTQIEEKGRISVVTGPNYSGKSVYIKQVALIVFLSHIGSFVPADEAVIGTTDRIFTRLPCKQSTKVPQSTFMTDLHQISVMLRYATSKSLCLIDEFGSGTMSADGIGLLCSTLHHFAGSESSPKILACTHFSEL 417          
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: A0A507EXU8_9FUNG (LysM domain-containing protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507EXU8_9FUNG)

HSP 1 Score: 203 bits (517), Expect = 2.770e-56
Identity = 105/220 (47.73%), Postives = 152/220 (69.09%), Query Frame = 0
Query:    1 MRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGS---RVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHLSRKGRKC---LFTLHFHEIFSHGLVRVSGP 214
            ++ L++ ++     L   A+V AELD  L+LA  A  + + RPE+  +N+ ++  GRHPLQE+ VD+F+ NDT + D     R+ L+TGAN SGKSVYLKQ+ +  Y+AH+GSFVPAE+AVI LTD+I TRI T E+ S  QS+F ID+ Q++  +R+ST RSL+L+DEFGKGT  ADGIGL+  +L+  +++G  C   +   HFHEIF++ L+ +  P
Sbjct: 1510 IQRLQETVLGYRATLIQVANVCAELDCILSLADAAKKYNYTRPEMTGENIFLVVKGRHPLQELCVDVFVANDTSMGDADDLPRMILLTGANFSGKSVYLKQIALITYMAHIGSFVPAERAVIRLTDKILTRIQTRESVSKMQSTFMIDLQQVSVALRSSTRRSLVLLDEFGKGTDTADGIGLLCGVLQDFAKRGEDCPHVIAATHFHEIFTYNLLTIPEP 1729          
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: A0A2H3JD94_WOLCO (Nucleoside triphosphate hydrolase protein n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3JD94_WOLCO)

HSP 1 Score: 192 bits (487), Expect = 7.470e-56
Identity = 110/243 (45.27%), Postives = 150/243 (61.73%), Query Frame = 0
Query:    1 MRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTF------------------IADGSR-----VALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHLSRKGRKC---LFTLHFHEIFSHGLVRVSGPDEL 217
            ++ L + +I  + AL   + V AELD  L+ A  A    +VRP + E N+I IK GRHPLQE+ VD F+PNDTF                  I+D SR     + + TGAN  GKSVYLKQV +  Y+A +GSFVPAE A +G+ D+IFTR+ T E+ S  QS+F ID+NQ++  +R +T RSL+L+DEFGKGT  ADG GL   +L+HL+ +G  C   L   HF ++FS+GL+    PD +
Sbjct:   49 VQSLLEKIIVFDKALSHISDVCAELDCLLSFAEAARGCNYVRPHMTEGNIIDIKQGRHPLQELVVDTFVPNDTFVIGGQGVGVEPVGVSDETISDSSRKESNSIIICTGANACGKSVYLKQVALIQYMAQIGSFVPAESATLGIVDKIFTRLQTRESVSRVQSAFMIDLNQVSLALRNATERSLILLDEFGKGTISADGAGLFCGVLKHLAGRGPMCPKVLAATHFQDVFSNGLI---SPDSV 288          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKD9_ECTSI1.490e-15597.94MutS protein homolog 5 n=1 Tax=Ectocarpus siliculo... [more]
A0A482T1K6_9ARCH5.070e-6148.25DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A2R6WVC4_MARPO2.270e-5957.29DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A1X7UDR7_AMPQE5.220e-5850.93DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
I0YMF5_COCSC6.220e-5853.05DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A2R6WVE1_MARPO9.010e-5857.29DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
D8R9G5_SELML1.490e-5749.27DNA_MISMATCH_REPAIR_2 domain-containing protein (F... [more]
D8SEG8_SELML2.930e-5749.27DNA_MISMATCH_REPAIR_2 domain-containing protein (F... [more]
A0A507EXU8_9FUNG2.770e-5647.73LysM domain-containing protein n=1 Tax=Spizellomyc... [more]
A0A2H3JD94_WOLCO7.470e-5645.27Nucleoside triphosphate hydrolase protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000432DNA mismatch repair protein MutS, C-terminalSMARTSM00534mutATP5coord: 79..243
e-value: 6.8E-22
score: 88.7
IPR000432DNA mismatch repair protein MutS, C-terminalPFAMPF00488MutS_Vcoord: 83..204
e-value: 3.4E-38
score: 131.6
IPR000432DNA mismatch repair protein MutS, C-terminalPROSITEPS00486DNA_MISMATCH_REPAIR_2coord: 160..176
NoneNo IPR availableGENE3D3.40.50.300coord: 40..243
e-value: 1.6E-69
score: 236.1
NoneNo IPR availablePANTHERPTHR11361:SF20MUTS PROTEIN HOMOLOG 5coord: 1..214
NoneNo IPR availablePANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 1..214
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 40..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9771contigEcto-sp13_S_contig9771:2545..6108 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9771.21423.1mRNA_Ecto-sp13_S_contig9771.21423.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9771 2534..6108 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9771.21423.1 ID=prot_Ecto-sp13_S_contig9771.21423.1|Name=mRNA_Ecto-sp13_S_contig9771.21423.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=243bp
MRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNV
IMIKNGRHPLQEMAVDLFIPNDTFIADGSRVALITGANCSGKSVYLKQVG
VAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIA
QMVRTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHLSRKGRKCLFTLHF
HEIFSHGLVRVSGPDELHTDLKDVSVFRMDVHVPSPPKAQESQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000432DNA_mismatch_repair_MutS_C
IPR027417P-loop_NTPase