mRNA_Ecto-sp13_S_contig9771.21423.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: D7FKD9_ECTSI (MutS protein homolog 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD9_ECTSI) HSP 1 Score: 460 bits (1183), Expect = 2.580e-157 Identity = 241/246 (97.97%), Postives = 243/246 (98.78%), Query Frame = 3
Query: 3 AKIMRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHLSRKGRKCLFTLHFHEIFSHGLVRVSGPDELHTDLKDVSVFRMDVHVPSPPKAQESQ 740
AKIMRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQ+AQM RTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHLSRKGRKCLFTLHFHEIFSH LV+VSGPDELHTDLKDVSVFRMDVHVPSPPKA ESQ
Sbjct: 351 AKIMRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQVAQMARTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHLSRKGRKCLFTLHFHEIFSHDLVKVSGPDELHTDLKDVSVFRMDVHVPSPPKAPESQ 596
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: A0A482T1K6_9ARCH (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T1K6_9ARCH) HSP 1 Score: 208 bits (530), Expect = 1.010e-61 Identity = 111/233 (47.64%), Postives = 160/233 (68.67%), Query Frame = 3
Query: 6 KIMRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHLSRKGRKCLFTLHFHEI-FSHGLVRVSGPDELHTDLKDVSVFRMD 701
+I+ LE+ L+ EG++ A + +A LDA ++L +A + P + +D VI+IK GRH LQE+ VD F+PND+ + VALI+G N SGKS+YLKQVG+ VYLAH+GSFVP E+A+IGLTD+I TRI T E+ S+PQSSFT+D+ Q++++++ T RSL LIDEFGKGT PADG+ L+AA++ + + +F LHF EI F H + + S + ++ FRM+
Sbjct: 93 QILLHLEEGLLDLEGSIVQATTSIATLDAFISLGIMARECNLSAPHIHDDPVIVIKGGRHLLQELTVDSFVPNDSLLTPEKNVALISGPNSSGKSIYLKQVGIIVYLAHIGSFVPCEQAIIGLTDKILTRIKTTESVSVPQSSFTMDLTQMSKILKYRTDRSLCLIDEFGKGTNPADGMALLAAIIEDFTERKSNAIFVLHFTEILFDHAIKQES--------MDSINCFRME 317
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: A0A2R6WVC4_MARPO (DNA_MISMATCH_REPAIR_2 domain-containing protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WVC4_MARPO) HSP 1 Score: 205 bits (521), Expect = 2.520e-59 Identity = 110/192 (57.29%), Postives = 141/192 (73.44%), Query Frame = 3
Query: 54 LHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAA-LLRHLSRKGR-KCLFTLHFHEIF 623
L +AA V AE+D ALA A D+G+VRP++ ED+V++I+NGRH LQEM + ++PNDT I R+ ++TG N SGKS+Y KQV + +LAH+GSFVPA+KA+IG+ DRIFTR+A+ ET + QSSF ID+NQI+ M+R ST RSL LIDEFGKGT +DGIGL+ A LL SRK K L HF EIF
Sbjct: 217 LESAAKVAAEIDCVTALAIAARDYGYVRPDLREDDVLIIENGRHVLQEMTANRYVPNDTHITKEGRINIVTGPNYSGKSIYAKQVALITFLAHIGSFVPADKAIIGIQDRIFTRVASKETVGISQSSFMIDLNQISVMLRHSTSRSLCLIDEFGKGTLTSDGIGLLCATLLEFASRKSPPKVLACTHFSEIF 408
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: I0YMF5_COCSC (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YMF5_COCSC) HSP 1 Score: 207 bits (527), Expect = 3.620e-58 Identity = 114/216 (52.78%), Postives = 148/216 (68.52%), Query Frame = 3
Query: 9 IMRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFI-ADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHLS--RKGRKCLFTLHFHEIFSHGLVRVS 647
I EL L A +L A ++ AE+D L+LA A DFG+ RP + +DNV+ IK GRHPL E+ VD FIPNDT + AD +RV +ITG N SGKS Y KQV + V+LAH+GSFVPA +A +GLTDRIFTRI T E S+PQS+F ID++Q++ M+R + PRSL +IDEFGKGT ADG GL+ A+LRH + R + + HF E+ +R S
Sbjct: 533 ICSELIQRLAAFGPSLSRAVALAAEVDCLLSLAQCARDFGYSRPRLTQDNVLHIKQGRHPLAELVVDRFIPNDTAMHADSARVQVITGPNYSGKSCYAKQVALIVFLAHIGSFVPAAEATVGLTDRIFTRIVTTEAQSVPQSAFMIDMSQVSNMLRHAGPRSLCIIDEFGKGTLAADGFGLLCAVLRHFTAQRPSPRVIAVTHFIEVLHEAYLRRS 748
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: A0A1X7UDR7_AMPQE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UDR7_AMPQE) HSP 1 Score: 207 bits (526), Expect = 4.190e-58 Identity = 109/215 (50.70%), Postives = 151/215 (70.23%), Query Frame = 3
Query: 9 IMRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGSR--VALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHLSRKGRKC---LFTLHFHEIFSHGLV 638
+M L+ L+ GAL + ELD ++++ +A + FV+PE+ EDNVI IKNGRHPLQE+ V+ F+PNDT ++D + + ++TGAN SGKSVYL QVG+ VYLAH+GSFVPAE A IG+ D IFTR+ T E+ S+ QS+F ID+NQ++ V+ T RSL+L+DEFGKGTA DG+ L+AA+LRH +K +C L + HFH + L+
Sbjct: 517 MMHRLQSVLMEHSGALISVIECTTELDCLVSMSKLAKEHNFVKPELTEDNVIYIKNGRHPLQELCVNTFVPNDT-VSDSAHGTMKILTGANASGKSVYLTQVGLIVYLAHIGSFVPAEAAKIGIMDGIFTRVQTRESVSIAQSTFLIDINQVSTAVQCGTHRSLILLDEFGKGTATVDGLALLAAVLRHWLKKEEECPHILVSTHFHSLLDQKLL 730
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: D8R9G5_SELML (DNA_MISMATCH_REPAIR_2 domain-containing protein (Fragment) n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R9G5_SELML) HSP 1 Score: 202 bits (513), Expect = 4.270e-58 Identity = 102/206 (49.51%), Postives = 150/206 (72.82%), Query Frame = 3
Query: 9 IMRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHL--SRKGRKCLFTLHFHEI 620
I++ELE + E A+ +A + A+LD +++A AG++ + RP +VED++++IKNGRHPLQE+ VD F+PN+T I + R+ ++TG N SGKSVY+KQV + V+L+H+GSFVPA++AVIG+TDRIFTR+ +++ +PQS+F D++QI+ M+R +T +SL LIDEFG GT ADGIGL+ + L H S K L HF E+
Sbjct: 212 ILKELESKVQKYEPAVRYSADLTAQLDCLVSMAISAGEYNYNRPRLVEDDILIIKNGRHPLQELTVDTFVPNNTQIEEKGRICVVTGPNYSGKSVYIKQVALIVFLSHIGSFVPADEAVIGITDRIFTRLPCKQSTKVPQSTFMTDLHQISVMLRYATSKSLCLIDEFGSGTMSADGIGLLCSTLHHFAGSESSPKILACTHFSEL 417
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: D8SEG8_SELML (DNA_MISMATCH_REPAIR_2 domain-containing protein (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SEG8_SELML) HSP 1 Score: 201 bits (511), Expect = 8.400e-58 Identity = 102/206 (49.51%), Postives = 150/206 (72.82%), Query Frame = 3
Query: 9 IMRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHL--SRKGRKCLFTLHFHEI 620
I++ELE + E A+ +A + A+LD +++A AG++ + RP +VED++++IKNGRHPLQE+ VD F+PN+T I + R++++TG N SGKSVY+KQV + V+L+H+GSFVPA++AVIG TDRIFTR+ +++ +PQS+F D++QI+ M+R +T +SL LIDEFG GT ADGIGL+ + L H S K L HF E+
Sbjct: 212 ILKELESKVQKYEPAVRYSADLTAQLDCLVSMAISAGEYNYNRPRLVEDDILIIKNGRHPLQELTVDTFVPNNTQIEEKGRISVVTGPNYSGKSVYIKQVALIVFLSHIGSFVPADEAVIGTTDRIFTRLPCKQSTKVPQSTFMTDLHQISVMLRYATSKSLCLIDEFGSGTMSADGIGLLCSTLHHFAGSESSPKILACTHFSEL 417
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: A0A2R6WVE1_MARPO (DNA_MISMATCH_REPAIR_2 domain-containing protein n=5 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WVE1_MARPO) HSP 1 Score: 205 bits (521), Expect = 1.000e-57 Identity = 110/192 (57.29%), Postives = 141/192 (73.44%), Query Frame = 3
Query: 54 LHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAA-LLRHLSRKGR-KCLFTLHFHEIF 623
L +AA V AE+D ALA A D+G+VRP++ ED+V++I+NGRH LQEM + ++PNDT I R+ ++TG N SGKS+Y KQV + +LAH+GSFVPA+KA+IG+ DRIFTR+A+ ET + QSSF ID+NQI+ M+R ST RSL LIDEFGKGT +DGIGL+ A LL SRK K L HF EIF
Sbjct: 549 LESAAKVAAEIDCVTALAIAARDYGYVRPDLREDDVLIIENGRHVLQEMTANRYVPNDTHITKEGRINIVTGPNYSGKSIYAKQVALITFLAHIGSFVPADKAIIGIQDRIFTRVASKETVGISQSSFMIDLNQISVMLRHSTSRSLCLIDEFGKGTLTSDGIGLLCATLLEFASRKSPPKVLACTHFSEIF 740
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: A0A507EXU8_9FUNG (LysM domain-containing protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507EXU8_9FUNG) HSP 1 Score: 205 bits (522), Expect = 6.590e-57 Identity = 106/222 (47.75%), Postives = 154/222 (69.37%), Query Frame = 3
Query: 6 KIMRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTFIADGS---RVALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHLSRKGRKC---LFTLHFHEIFSHGLVRVSGP 653
+I++ L++ ++ L A+V AELD L+LA A + + RPE+ +N+ ++ GRHPLQE+ VD+F+ NDT + D R+ L+TGAN SGKSVYLKQ+ + Y+AH+GSFVPAE+AVI LTD+I TRI T E+ S QS+F ID+ Q++ +R+ST RSL+L+DEFGKGT ADGIGL+ +L+ +++G C + HFHEIF++ L+ + P
Sbjct: 1508 EIIQRLQETVLGYRATLIQVANVCAELDCILSLADAAKKYNYTRPEMTGENIFLVVKGRHPLQELCVDVFVANDTSMGDADDLPRMILLTGANFSGKSVYLKQIALITYMAHIGSFVPAERAVIRLTDKILTRIQTRESVSKMQSTFMIDLQQVSVALRSSTRRSLVLLDEFGKGTDTADGIGLLCGVLQDFAKRGEDCPHVIAATHFHEIFTYNLLTIPEP 1729
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Match: A0A2H3JD94_WOLCO (Nucleoside triphosphate hydrolase protein n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3JD94_WOLCO) HSP 1 Score: 194 bits (492), Expect = 1.490e-56 Identity = 111/245 (45.31%), Postives = 152/245 (62.04%), Query Frame = 3
Query: 6 KIMRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQEMAVDLFIPNDTF------------------IADGSR-----VALITGANCSGKSVYLKQVGVAVYLAHVGSFVPAEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQIAQMVRTSTPRSLLLIDEFGKGTAPADGIGLVAALLRHLSRKGRKC---LFTLHFHEIFSHGLVRVSGPDEL 662
+I++ L + +I + AL + V AELD L+ A A +VRP + E N+I IK GRHPLQE+ VD F+PNDTF I+D SR + + TGAN GKSVYLKQV + Y+A +GSFVPAE A +G+ D+IFTR+ T E+ S QS+F ID+NQ++ +R +T RSL+L+DEFGKGT ADG GL +L+HL+ +G C L HF ++FS+GL+ PD +
Sbjct: 47 EIVQSLLEKIIVFDKALSHISDVCAELDCLLSFAEAARGCNYVRPHMTEGNIIDIKQGRHPLQELVVDTFVPNDTFVIGGQGVGVEPVGVSDETISDSSRKESNSIIICTGANACGKSVYLKQVALIQYMAQIGSFVPAESATLGIVDKIFTRLQTRESVSRVQSAFMIDLNQVSLALRNATERSLILLDEFGKGTISADGAGLFCGVLKHLAGRGPMCPKVLAATHFQDVFSNGLI---SPDSV 288 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9771.21423.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9771.21423.1 >prot_Ecto-sp13_S_contig9771.21423.1 ID=prot_Ecto-sp13_S_contig9771.21423.1|Name=mRNA_Ecto-sp13_S_contig9771.21423.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=243bp MRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVback to top mRNA from alignment at Ecto-sp13_S_contig9771:2534..6108+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9771.21423.1 ID=mRNA_Ecto-sp13_S_contig9771.21423.1|Name=mRNA_Ecto-sp13_S_contig9771.21423.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3575bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9771:2534..6108+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9771:2534..6108+ >mRNA_Ecto-sp13_S_contig9771.21423.1 ID=mRNA_Ecto-sp13_S_contig9771.21423.1|Name=mRNA_Ecto-sp13_S_contig9771.21423.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=729bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9771:2534..6108+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |