prot_Ecto-sp13_S_contig9714.21350.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9714.21350.1
Unique Nameprot_Ecto-sp13_S_contig9714.21350.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length176
Homology
BLAST of mRNA_Ecto-sp13_S_contig9714.21350.1 vs. uniprot
Match: D8LBI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI8_ECTSI)

HSP 1 Score: 286 bits (733), Expect = 2.050e-86
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0
Query:   34 MPPSPPQVLFFGEFRPKETGELDEVKFREAVVARIIHVVPAGEQPTQVALPPTFRGITQVEPFQLEVFCKNLNNLHSRYFDRLMPTATVPGGAVYTMPQDIVTNHLVIRGSFQAMSVVICGTVVPRTALSPDAIQALTVSDKP 176
            MPPSPPQVLFFGEFRPKETGELDEVKFREAVVARIIHVVPAGEQPTQVALPPTFRGITQVEPFQLEVFCKNLNNLHS+YFDRLMPTATVPGGAVYTMPQDIVTNHLVIRGSFQAMSVVICGTVVPRTALSPDAIQALTVSDKP
Sbjct:    1 MPPSPPQVLFFGEFRPKETGELDEVKFREAVVARIIHVVPAGEQPTQVALPPTFRGITQVEPFQLEVFCKNLNNLHSKYFDRLMPTATVPGGAVYTMPQDIVTNHLVIRGSFQAMSVVICGTVVPRTALSPDAIQALTVSDKP 143          
BLAST of mRNA_Ecto-sp13_S_contig9714.21350.1 vs. uniprot
Match: A0A6H5JNJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ9_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 1.170e-68
Identity = 119/124 (95.97%), Postives = 119/124 (95.97%), Query Frame = 0
Query:   53 GELDEVKFREAVVARIIHVVPAGEQPTQVALPPTFRGITQVEPFQLEVFCKNLNNLHSRYFDRLMPTATVPGGAVYTMPQDIVTNHLVIRGSFQAMSVVICGTVVPRTALSPDAIQALTVSDKP 176
            G    VKFREAVVARIIHVVPAGEQPTQVALPPTFRGITQVEPFQLEVFCKNLNNLHSRYFDRLMPTATVPGGAVYTMPQDIVTNHLVIRGSFQAMSVVICGTVVPRTALSP AIQALTVSDKP
Sbjct:   16 GTPTAVKFREAVVARIIHVVPAGEQPTQVALPPTFRGITQVEPFQLEVFCKNLNNLHSRYFDRLMPTATVPGGAVYTMPQDIVTNHLVIRGSFQAMSVVICGTVVPRTALSPGAIQALTVSDKP 139          
BLAST of mRNA_Ecto-sp13_S_contig9714.21350.1 vs. uniprot
Match: A0A7S4DEG1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEG1_HETAK)

HSP 1 Score: 108 bits (271), Expect = 3.980e-26
Identity = 55/131 (41.98%), Postives = 81/131 (61.83%), Query Frame = 0
Query:   41 VLFFGEFRPKETG-ELDEVKFREAVVARIIHVVPAGEQPTQVALPPTFRGITQVEPFQLEVFCKNLNNLHSRYFDRLMPTATVPGGAVYTMPQDIVTNHLVIRGSFQAMSVVICGTVVPRTALSPDAIQAL 170
            +LF G+F+ K+   ++DE+ FREAVV +   +VPAG  P    LP  F+ +TQ E F LEVF K+L++     FDRL P     GG  +    + +TNHL++RGS+ A+S+ + G V+PR  LSP+ +  L
Sbjct:    7 ILFVGDFQHKDLEIDIDEITFREAVVVKGFQIVPAGTNPHPETLP-NFKSVTQSEKFNLEVFAKDLSSPGKTSFDRLTPRFEGQGGVTFNTQDEQITNHLILRGSYTALSICLYGNVIPRPQLSPEVLATL 136          
BLAST of mRNA_Ecto-sp13_S_contig9714.21350.1 vs. uniprot
Match: A0A1Y1IHP4_KLENI (VIR_N domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IHP4_KLENI)

HSP 1 Score: 65.1 bits (157), Expect = 4.710e-9
Identity = 41/125 (32.80%), Postives = 65/125 (52.00%), Query Frame = 0
Query:   40 QVLFFGEFRPKETGE-LDEVKFREAVVARIIHVVPAGEQPTQVALPPTFRGITQVEPFQLEVFCKNLNNLHSRYFDRLMPTAT--VPGGAVYTMPQDIVTNHLVIRGSFQAMSVVICGTVVPRTA 161
            +VL+   F  +   + +DEV F++ V+    H+VP    P    L   F  +T   PF L+VF  N  + ++ +F +L P  +    GG     PQ +VT HLV RG++Q +S++I G  +P  A
Sbjct:    2 EVLYCDSFLHEAAADHVDEVLFKKPVIVSACHIVPKDGNPEPELL--EFFSLTSPPPFNLQVFYHN-GDQNASHFQKLGPQISWVADGGKESIDPQPVVTRHLVFRGNYQNLSLIIYGATIPDEA 123          
BLAST of mRNA_Ecto-sp13_S_contig9714.21350.1 vs. uniprot
Match: A0A388KCM5_CHABU (VIR_N domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KCM5_CHABU)

HSP 1 Score: 59.7 bits (143), Expect = 3.460e-7
Identity = 39/118 (33.05%), Postives = 63/118 (53.39%), Query Frame = 0
Query:   50 KETGELDEVKFREAVVARIIHVVPAGEQPTQVALPPTFRGITQVEPFQLEVFCKNLNNLHSRYFDRLMPTATVPGGAVYTMPQDI-VTNHLVIRGSFQAMSVVICGT-VVPRTALSPD 165
            + T  +DEV+F   V+     +V   E P    L   F+GIT    F L++F +NL     R F+RL        G   T+  ++ +T+HLV+RG++Q++S++I G+    +T L PD
Sbjct:   57 RATDNIDEVRFDHPVIISACSIVDQNENPHPDLLQ-DFKGITTPPTFTLDIFVRNLIKPSDR-FERLSQRLVYAHGTQETLGVEVTITDHLVLRGTYQSVSLIIYGSRAEEKTGLLPD 172          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9714.21350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LBI8_ECTSI2.050e-8699.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNJ9_9PHAE1.170e-6895.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4DEG1_HETAK3.980e-2641.98Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1Y1IHP4_KLENI4.710e-932.80VIR_N domain-containing protein n=1 Tax=Klebsormid... [more]
A0A388KCM5_CHABU3.460e-733.05VIR_N domain-containing protein n=1 Tax=Chara brau... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031801Virilizer, N-terminalPFAMPF15912VIR_Ncoord: 40..157
e-value: 1.2E-8
score: 34.9
IPR026736Protein virilizerPANTHERPTHR23185UNCHARACTERIZEDcoord: 37..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9714contigEcto-sp13_S_contig9714:2689..5265 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9714.21350.1mRNA_Ecto-sp13_S_contig9714.21350.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9714 2689..5265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9714.21350.1 ID=prot_Ecto-sp13_S_contig9714.21350.1|Name=mRNA_Ecto-sp13_S_contig9714.21350.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=176bp
MCHRTRHRPGTTAAAGTWCPHTVAKIMQHPPHLMPPSPPQVLFFGEFRPK
ETGELDEVKFREAVVARIIHVVPAGEQPTQVALPPTFRGITQVEPFQLEV
FCKNLNNLHSRYFDRLMPTATVPGGAVYTMPQDIVTNHLVIRGSFQAMSV
VICGTVVPRTALSPDAIQALTVSDKP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031801VIR_N
IPR026736Virilizer