prot_Ecto-sp13_S_contig9709.21345.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9709.21345.1
Unique Nameprot_Ecto-sp13_S_contig9709.21345.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length55
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9709.21345.1 vs. uniprot
Match: D8LB63_ECTSI (Putative adhesion lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB63_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 6.000e-26
Identity = 52/55 (94.55%), Postives = 55/55 (100.00%), Query Frame = 0 
Query:    1 VFLPTDDAFEAEGITDTSITTLPQPAVQNLFLYHLLEGAASSDVIANATEFYTVL 55
            VFLPTDDAFEAEGITDTSITTLPQPAVQNLFLYHLLEGAASS+V+ANAT+FYTVL
Sbjct:  244 VFLPTDDAFEAEGITDTSITTLPQPAVQNLFLYHLLEGAASSEVMANATDFYTVL 298
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9709.21345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB63_ECTSI6.000e-2694.55Putative adhesion lipoprotein n=2 Tax=Ectocarpus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036378FAS1 domain superfamilyGENE3D2.30.180.10coord: 1..55
e-value: 3.8E-6
score: 29.0
IPR036378FAS1 domain superfamilySUPERFAMILY82153FAS1 domaincoord: 1..50
IPR000782FAS1 domainPROSITEPS50213FAS1coord: 1..55
score: 11.323

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9709contigEcto-sp13_S_contig9709:217..381 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9709.21345.1mRNA_Ecto-sp13_S_contig9709.21345.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9709 217..381 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9709.21345.1 ID=prot_Ecto-sp13_S_contig9709.21345.1|Name=mRNA_Ecto-sp13_S_contig9709.21345.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=55bp
VFLPTDDAFEAEGITDTSITTLPQPAVQNLFLYHLLEGAASSDVIANATE
FYTVL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036378FAS1_dom_sf
IPR000782FAS1_domain