mRNA_Ecto-sp13_S_contig12567.2125.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12567.2125.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI) HSP 1 Score: 120 bits (300), Expect = 4.920e-28 Identity = 70/138 (50.72%), Postives = 85/138 (61.59%), Query Frame = 2
Query: 2 VDALIEAGAGTEMKRTGGATPVWIAAFFCSP*TLLALFLKGA-IANAPDNRGKTPLHVACLPRGGDLAAVVDLLLRWGADETAVDNEGRTPAERLNDVPGDRS-CSQEDFDRAQLLLARAPADRAWRGRGWLVMLRSR 409
V L++A A TE+K GG TP+ AA + AL A + N D G TPLH AC+ + LAA +DLLLRWGADETA + GRTP + L D CS ++ DRA+LLL RAP DR WR RGWLV+LRSR
Sbjct: 291 VHMLVKARADTELKSVGGWTPLHAAAEHHRVNCVAALLQNNASVRNRFDATGDTPLHRACVEQREGLAASIDLLLRWGADETARNKRGRTPLDVLGATRTDNPHCSPDEVDRARLLLVRAPTDRRWRRRGWLVVLRSR 428
BLAST of mRNA_Ecto-sp13_S_contig12567.2125.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI) HSP 1 Score: 119 bits (297), Expect = 1.170e-27 Identity = 68/117 (58.12%), Postives = 81/117 (69.23%), Query Frame = 2
Query: 110 LFLKGAIANAPDNRGKTPLHVACLPRGGDLAAVVDLLLRWGADETAVDNEGRTPAERLN--DVPGDRS-CSQEDFDRAQLLLARAPADRAWRGRGWLVMLRSRASTARITTCDSSGD 451
L GA A D G TPLHVAC + L A VDLLLRWGADETA++N G+TPA L+ D DR+ CS+ + +R ++LLARAPADRAWR R WLVMLRS A TA+ TT D +GD
Sbjct: 325 LLWHGASLTAQDTEGNTPLHVACYRQHKGLEAPVDLLLRWGADETALNNAGKTPAGLLDEHDNENDRTTCSEAEINRVRMLLARAPADRAWRRRCWLVMLRSFARTAKATT-DETGD 440
BLAST of mRNA_Ecto-sp13_S_contig12567.2125.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI) HSP 1 Score: 117 bits (293), Expect = 1.530e-27 Identity = 69/146 (47.26%), Postives = 88/146 (60.27%), Query Frame = 2
Query: 2 VDALIEAGAGTEMKRTGGA----TPVWIAAFFCSP*TLLALFLKGAIANAPDNRGKTPLHVACLPRGGDLAAVVDLLLRWGADETAVDNEGRTPAERLNDVPGDRSCSQEDFDRAQLLLARAPADRAWRGRGWLVMLRSRASTARI 427
V+ L+EAGA +++ G+ TP+ AA S L L GA N PD+ G PLH+A + + VVDLLLRWGA ETAV+ G TPAE + R + E+ A +LLARAPADRAWR RGW+VMLR+R+ T RI
Sbjct: 218 VEVLLEAGADADVESLPGSPCYDTPLLAAAESMSNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAGALVLLARAPADRAWRRRGWVVMLRARSETERI 363
BLAST of mRNA_Ecto-sp13_S_contig12567.2125.1 vs. uniprot
Match: D8LNI8_ECTSI (EsV-1-8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI8_ECTSI) HSP 1 Score: 113 bits (283), Expect = 1.900e-27 Identity = 63/118 (53.39%), Postives = 74/118 (62.71%), Query Frame = 2
Query: 107 ALFLKGAIANAPDNRGKTPLHVACLPRGGDLAAVVDLLLRWGADETAVDNEGRTPAE----RLNDVPGDRSCSQEDFDRAQLLLARAPADRAWRGRGWLVMLRSRASTARITTCDSSG 448
ALF GA N+G TPLH C R L A VD+LLRWGADET ++ G +PA+ R V G Q++ DR +LLL+RAPADRAWR RGWLVMLRSR S A+ C SSG
Sbjct: 3 ALFQHGAQVGVRGNQGYTPLHETCWERHEGLEAAVDMLLRWGADETTLNYGGASPADFLGGRYGKVIGHNPAPQDEIDRTRLLLSRAPADRAWRRRGWLVMLRSRDSKAQEGKCRSSG 120
BLAST of mRNA_Ecto-sp13_S_contig12567.2125.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI) HSP 1 Score: 117 bits (293), Expect = 3.380e-27 Identity = 85/178 (47.75%), Postives = 107/178 (60.11%), Query Frame = 2
Query: 152 GKTPLHVACLPRGGDLAAVVDLLLRWGADETAVDNEGRTPAERL--NDVPGDRSCSQEDFDRAQLLLARAPADRAWRGRGWLVMLRSRASTARITTCDSSGDTRVESSGAAASGMGERR----KMARREGEASVTGGGREQAGSGVDDVEPESPAGSRAVRGAVGWLVGMQPEGVFRS 667
G TPLH AC + + A VDLLL+WGADETAV N+G TPA+ L N+ +CS + R +LLLARAPA+RAWR R WLVMLRS A TAR TT D +GD S+ +G+R+ K ARRE S GG R + +G +V E G+ + V +VG+ PE VFRS
Sbjct: 280 GTTPLHRACYRQDIGVEATVDLLLQWGADETAVHNDGNTPADWLVENNNENGTTCSTAEIGRVRLLLARAPANRAWRRRCWLVMLRSCAKTARATT-DKTGDADEGSND-----VGDRKDGKCKGARRENGESAGGGVRSRM-NGAGEVGVEG--GASGLASIVASVVGLGPEEVFRS 448
BLAST of mRNA_Ecto-sp13_S_contig12567.2125.1 vs. uniprot
Match: A0A6H5JWW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW4_9PHAE) HSP 1 Score: 113 bits (282), Expect = 3.380e-25 Identity = 73/145 (50.34%), Postives = 90/145 (62.07%), Query Frame = 2
Query: 35 EMKRTGGATPVWIAAFFCSP*TLLA---LFLKGAIANAPDNRGKTPLHVACLPRGGDLAAVVDLLLRWGADETAVDNEGRTPAERLN--DVPGDRS-CSQEDFDRAQLLLARAPADRAWRGRGWLVMLRSRASTARITTCDSSGD 451
E G + P +A P L A L GA A D G TPLH+AC + L A VDLLLRWGADETA++N+G+TPA+ L+ D DR+ CS+ + +R +LLLARAPAD+A R R WLVMLRS A T R TT D +GD
Sbjct: 513 ESSEGGSSAPPLFSA--TDPRNLKAMNTLLGHGASLTAQDVDGNTPLHLACYRQDSGLEAPVDLLLRWGADETALNNDGKTPADLLDEHDNENDRTTCSEAEIERVRLLLARAPADQARRRRCWLVMLRSFARTTRATT-DETGD 654
BLAST of mRNA_Ecto-sp13_S_contig12567.2125.1 vs. uniprot
Match: A0A6H5JRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY1_9PHAE) HSP 1 Score: 110 bits (276), Expect = 6.730e-25 Identity = 80/175 (45.71%), Postives = 107/175 (61.14%), Query Frame = 2
Query: 152 GKTPLHVACLPRGGDLAAVVDLLLRWGADETAVDNEGRTPAERLN--DVPGDRS-CSQEDFDRAQLLLARAPADRAWRGRGWLVMLRSRASTARITTCDSSGDTRVESSGAAASGMGERRKMARREGEASVTGGGREQAGSGVDDVEPESPAGSRAVRGAVGWLVGMQPEGVFRS 667
G TPLH AC + + A VDLLLRWGADETA+DN+ +TPA+ L+ D DR+ CS+ + ++ +LL+ARAPA+RAWR R WLVMLRS A TAR TT +++GD E S ARRE S G R + +G +V + G+ + V +VG++PE VFRS
Sbjct: 257 GGTPLHWACYWQVRGVEATVDLLLRWGADETALDNDSKTPADLLDEDDNENDRTTCSEAEIEQVRLLMARAPANRAWRRRCWLVMLRSYAKTARATT-EATGDA-DEGSKXXXXXXXXXXXXARRENGESAGGWLRSRM-NGAGEVGVD--IGAAGLASIVNSVVGLEPEEVFRS 426
BLAST of mRNA_Ecto-sp13_S_contig12567.2125.1 vs. uniprot
Match: D7FYG4_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG4_ECTSI) HSP 1 Score: 110 bits (274), Expect = 2.340e-24 Identity = 66/146 (45.21%), Postives = 84/146 (57.53%), Query Frame = 2
Query: 2 VDALIEAGAGTEMKRTG-----------GATPVWIAAFFCSP*TLLALFLKGAIANAPDNRGKTPLHVACLPRGGDLAAVVDLLLRWGADETAVDNEGRTPAERLNDVPGDRSCSQEDFDRAQLLLARAPADRAWRGRGWLVMLRS 406
V AL+E GA E + G+T + +AA++ + T+LAL KGA ANAPD+ G PLH+ C AV DLLLRWGA+ETA DN+G TPA+ + S E R Q LLA APA RAWR RG ++MLR+
Sbjct: 298 VHALVEVGADVEARCLAQLLSEQRHSLKGSTSLHVAAYWETLDTMLALLQKGANANAPDDDGHGPLHLVCKYPKARSVAVADLLLRWGAEETATDNDGNTPADFIQS-------SDESDGRLQRLLANAPAGRAWRRRGMVIMLRA 436
BLAST of mRNA_Ecto-sp13_S_contig12567.2125.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI) HSP 1 Score: 107 bits (266), Expect = 3.030e-23 Identity = 61/142 (42.96%), Postives = 81/142 (57.04%), Query Frame = 2
Query: 2 VDALIEAGAGTEMKRTGGATPVWIAAFF-CSP*TLLALFLKGAIANAPDNRGKTPLHVACLPRGGDLAAVVDLLLRWGADETAVDNEGRTPAERLNDVPGDRSCSQEDFDRAQLLLARAPADRAWRGRGWLVMLRSRASTAR 424
+D L++AGA + K G +TP+ +A F S + L +G + P + KT LH+AC+ A+VDLLLRWG E +D G TPA L+ G S + +RA +LLA APADRAWR R WLVMLR+R R
Sbjct: 285 MDVLLDAGADMDRKCYGASTPLCVAIEFGASVQAVHTLLRRGCQVSGPMD--KTMLHLACMTMAPGFDAIVDLLLRWGVSELTLDKGGNTPAALLSVAEGSSSRKAREVERAHVLLANAPADRAWRRRSWLVMLRARTERER 424
BLAST of mRNA_Ecto-sp13_S_contig12567.2125.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 104 bits (259), Expect = 2.740e-22 Identity = 88/230 (38.26%), Postives = 117/230 (50.87%), Query Frame = 2
Query: 2 VDALIEAGAGTEMKRTGG--ATPVWIAA--FFCSP*TLLALFLKGAIANAPDNRGKTPLHVACLPRGGDLAAVVDLLLRWGADETAVDNEGRTPAERL-----NDVPGDRSCSQEDFDRAQLLLARAPADRAWRGRGWLVMLRSRASTARITTCDSSGDTRVESSGAAASGMGERRKMARREGEASVTGGGREQAGSGVDDVEPESPAGSRAVRGAVGWLVGMQPEGVFR 664
V L+ AGA +K T ATP+ +A + S T+ AL GA NA TPLH+AC G +VV+LLLRWGADE +N+G TPA+ + ND+ + + D R +LARAPADR+WR RGWLV+ RS + I SS + +G +A K+AR G+ GS DD E E +R VG LVG++ EG+FR
Sbjct: 300 VRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRG---SVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEER--EADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNSA-------KVARVSGQ-----------GSSRDDEETEDQM-MVDLRDLVGRLVGLEAEGLFR 505 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12567.2125.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12567.2125.1 >prot_Ecto-sp13_S_contig12567.2125.1 ID=prot_Ecto-sp13_S_contig12567.2125.1|Name=mRNA_Ecto-sp13_S_contig12567.2125.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=126bp MKPPWTTRAAPRRNDSTTCPVTVRVPKKTSIGRSCCWPGLPRTGRGVAAAback to top mRNA from alignment at Ecto-sp13_S_contig12567:1347..2014+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12567.2125.1 ID=mRNA_Ecto-sp13_S_contig12567.2125.1|Name=mRNA_Ecto-sp13_S_contig12567.2125.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=668bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12567:1347..2014+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12567:1347..2014+ >mRNA_Ecto-sp13_S_contig12567.2125.1 ID=mRNA_Ecto-sp13_S_contig12567.2125.1|Name=mRNA_Ecto-sp13_S_contig12567.2125.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=378bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12567:1347..2014+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |