prot_Ecto-sp13_S_contig96155.21236.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig96155.21236.1
Unique Nameprot_Ecto-sp13_S_contig96155.21236.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length37
Homology
BLAST of mRNA_Ecto-sp13_S_contig96155.21236.1 vs. uniprot
Match: D7FL32_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL32_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 2.260e-18
Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 0
Query:    1 GQEEECNCYGAGAEGECCRTCEDVRKAYRRKGWRLNP 37
            GQE+ECNCYGAGAEGECCRTCEDVRKAYRRKGWRLNP
Sbjct:  198 GQEDECNCYGAGAEGECCRTCEDVRKAYRRKGWRLNP 234          
BLAST of mRNA_Ecto-sp13_S_contig96155.21236.1 vs. uniprot
Match: A0A7S2US83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US83_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 2.490e-8
Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    4 EEC-NCYGAGAEGECCRTCEDVRKAYRRKGWRLNP 37
            EEC +CYGAG EGECC TC+DV+ AY+R+GW   P
Sbjct:    2 EECGDCYGAGNEGECCNTCDDVKLAYKRRGWAFMP 36          
BLAST of mRNA_Ecto-sp13_S_contig96155.21236.1 vs. uniprot
Match: B7FPS4_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPS4_PHATC)

HSP 1 Score: 56.2 bits (134), Expect = 3.790e-8
Identity = 20/29 (68.97%), Postives = 27/29 (93.10%), Query Frame = 0
Query:    7 NCYGAGAEGECCRTCEDVRKAYRRKGWRL 35
            +CYGAG EGECC++CEDV++AY+R+GW L
Sbjct:  165 DCYGAGEEGECCKSCEDVKRAYKRRGWSL 193          
BLAST of mRNA_Ecto-sp13_S_contig96155.21236.1 vs. uniprot
Match: B8C292_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C292_THAPS)

HSP 1 Score: 55.8 bits (133), Expect = 5.180e-8
Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    3 EEEC-NCYGAGAEGECCRTCEDVRKAYRRKGWRL 35
            EEEC +CYGAG EGECC TC+DV++AYR K W +
Sbjct:  139 EEECGSCYGAGGEGECCNTCDDVKRAYRTKQWHI 172          
BLAST of mRNA_Ecto-sp13_S_contig96155.21236.1 vs. uniprot
Match: A0A7S1UUT3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UUT3_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 5.260e-8
Identity = 23/33 (69.70%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    4 EEC-NCYGAGAEGECCRTCEDVRKAYRRKGWRL 35
            EEC +C+GAG EGECC TC+DV++AY+RKGW L
Sbjct:  162 EECGSCFGAGEEGECCDTCDDVKRAYKRKGWVL 194          
BLAST of mRNA_Ecto-sp13_S_contig96155.21236.1 vs. uniprot
Match: A0A7S2SEE8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SEE8_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 7.080e-8
Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    3 EEEC-NCYGAGAEGECCRTCEDVRKAYRRKGWRLN 36
            EEEC +CYGAG EGECC TC+DV++ Y+ KGW  N
Sbjct:  151 EEECGSCYGAGDEGECCNTCDDVKRVYQGKGWLFN 185          
BLAST of mRNA_Ecto-sp13_S_contig96155.21236.1 vs. uniprot
Match: A0A7R9U337_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U337_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 7.090e-8
Identity = 20/31 (64.52%), Postives = 26/31 (83.87%), Query Frame = 0
Query:    7 NCYGAGAEGECCRTCEDVRKAYRRKGWRLNP 37
            +CYGAG EG+CC TC+DVR AY+R+GW  +P
Sbjct:  167 DCYGAGEEGQCCNTCDDVRLAYQRRGWSFDP 197          
BLAST of mRNA_Ecto-sp13_S_contig96155.21236.1 vs. uniprot
Match: A0A7S4IKK9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IKK9_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 9.700e-8
Identity = 21/35 (60.00%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    3 EEEC-NCYGAGAEGECCRTCEDVRKAYRRKGWRLN 36
            E+EC +CYGAG EGECC TC+DV++AY+R+ W ++
Sbjct:  191 EDECGDCYGAGEEGECCNTCDDVKRAYQRRSWHID 225          
BLAST of mRNA_Ecto-sp13_S_contig96155.21236.1 vs. uniprot
Match: A0A1Z5JLU5_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLU5_FISSO)

HSP 1 Score: 54.3 bits (129), Expect = 1.810e-7
Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 0
Query:    7 NCYGAGAEGECCRTCEDVRKAYRRKGWRL 35
            +CYGAG E ECC TCED+++AY+RKGW L
Sbjct:  164 SCYGAGDEDECCNTCEDIQRAYKRKGWAL 192          
BLAST of mRNA_Ecto-sp13_S_contig96155.21236.1 vs. uniprot
Match: A0A640KUU7_LEITA (Uncharacterized protein n=1 Tax=Leishmania tarentolae TaxID=5689 RepID=A0A640KUU7_LEITA)

HSP 1 Score: 54.3 bits (129), Expect = 1.810e-7
Identity = 23/31 (74.19%), Postives = 27/31 (87.10%), Query Frame = 0
Query:    7 NCYGAG-AEGECCRTCEDVRKAYRRKGWRLN 36
            +CYGAG A GECC TCEDVR+AY RKGW+L+
Sbjct:  146 SCYGAGRAPGECCHTCEDVRQAYARKGWKLD 176          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig96155.21236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL32_ECTSI2.260e-1897.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2US83_9STRA2.490e-865.71Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
B7FPS4_PHATC3.790e-868.97Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
B8C292_THAPS5.180e-867.65Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S1UUT3_9STRA5.260e-869.70Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S2SEE8_9STRA7.080e-865.71Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7R9U337_9STRA7.090e-864.52Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S4IKK9_9STRA9.700e-860.00Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1Z5JLU5_FISSO1.810e-768.97Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A640KUU7_LEITA1.810e-774.19Uncharacterized protein n=1 Tax=Leishmania tarento... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012936Endoplasmic reticulum vesicle transporter, C-terminalPFAMPF07970COPIIcoated_ERVcoord: 8..36
e-value: 2.9E-10
score: 40.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig96155contigEcto-sp13_S_contig96155:356..466 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig96155.21236.1mRNA_Ecto-sp13_S_contig96155.21236.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig96155 356..466 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig96155.21236.1 ID=prot_Ecto-sp13_S_contig96155.21236.1|Name=mRNA_Ecto-sp13_S_contig96155.21236.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=37bp
GQEEECNCYGAGAEGECCRTCEDVRKAYRRKGWRLNP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012936Erv_C