mRNA_Ecto-sp13_S_contig12558.2119.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12558.2119.1
Unique NamemRNA_Ecto-sp13_S_contig12558.2119.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: A0A6H5L981_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L981_9PHAE)

HSP 1 Score: 547 bits (1409), Expect = 9.600e-187
Identity = 282/286 (98.60%), Postives = 282/286 (98.60%), Query Frame = 1
Query:    1 RCIQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTFKGMDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKGMYNRIITPADAKLTEDVLRSFGQALEDSVQRGDLRLDLSSDDGAGITITPTSTAAGARPRAEDGGISTGPNRRSLPQR 858
            RCIQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTFKG DVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKE IRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDK MYNRIITPADAKLTEDVLRSFGQALEDSVQRGDLRLDLSSDDGAGITITPTSTAAGARP AEDGGISTGPNRRSLPQR
Sbjct:  666 RCIQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTFKGTDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKERIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKEMYNRIITPADAKLTEDVLRSFGQALEDSVQRGDLRLDLSSDDGAGITITPTSTAAGARPTAEDGGISTGPNRRSLPQR 951          
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: A0A835Z050_9STRA (ClpP/crotonase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z050_9STRA)

HSP 1 Score: 182 bits (462), Expect = 7.620e-49
Identity = 101/224 (45.09%), Postives = 138/224 (61.61%), Query Frame = 1
Query:    7 IQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTFKGMDVVTDDV-LRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEK-LVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKGMYNRIITPADAKLTED 672
            + SV    GGV         G G+ A  V E +RKEF T HGRVV DGGG+EADV     + S+LE+AL VQ  YFD+AG W+ TH FK  D V DD    DF+ +V ++Q+ G YDL A+Y  Q  SLES L +  L +     ++P+ + +  EM+  FD++K  IR +LE AILSRYLPESM+L++QL  D QF++AL +V+D+  Y+ ++    A   ED
Sbjct:  527 LSSVEMGGGGVR--------GAGYTARAVREKDRKEFKTTHGRVVRDGGGIEADVVAPEKQTSSLEVALLVQNVYFDYAGHWSATHAFKNTDRVVDDATFNDFRRYVVEKQRAGDYDLLALYQSQFKSLESALTEGGLQNLATGKLDPIKRSVLDEMMRGFDTQKGTIREALENAILSRYLPESMLLKRQLTTDDQFKLALSIVKDRPRYDSLLAGPAADAAED 742          
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: W7T550_9STRA (Carboxyl-terminal protease (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T550_9STRA)

HSP 1 Score: 155 bits (393), Expect = 4.260e-41
Identity = 88/236 (37.29%), Postives = 138/236 (58.47%), Query Frame = 1
Query:    1 RCIQSVNYKE-----GGVAMGEEKQSSGF----------------GFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTF-------KGMDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKG 624
            RCIQSV Y       GGV +G E+  +G                 G+ A+++PE ER+ F T HGRVV DGGGVEAD+KV  P+ S LE++LQ QG +FDFA +W+  HT+       +G  +VTD   ++F ++V +++KEG+     ++   L+ L + L+ +      K ++ L   + +E+   F++ K  I+  +E+AIL+RY PES++ R  L+ DPQ +VA+E V++ G
Sbjct:   37 RCIQSVRYSSPPPAGGGVMLGTEEDGAGKTKDSLQKRRIGLGREKGYLANDIPESERQTFYTTHGRVVRDGGGVEADLKVAAPQASVLEVSLQQQGVFFDFANEWSSKHTYTPGAGVQEGRPLVTDATYQEFVDYVGRKEKEGSVRYDVLFNGALEPLRTALDATEYKKAGKGLDALKAAVREEVSREFNTHKAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAVKEGG 272          
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: I2CP28_NANGC (Carboxyl-terminal protease (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP28_NANGC)

HSP 1 Score: 155 bits (393), Expect = 2.570e-40
Identity = 88/236 (37.29%), Postives = 138/236 (58.47%), Query Frame = 1
Query:    1 RCIQSVNYKE-----GGVAMGEEKQSSGF----------------GFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTF-------KGMDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKG 624
            RCIQSV Y       GGV +G E+  +G                 G+ A+++PE ER+ F T HGRVV DGGGVEAD+KV  P+ S LE++LQ QG +FDFA +W+  HT+       +G  +VTD   ++F ++V +++KEG+     ++   L+ L + L+ +      K ++ L   + +E+   F++ K  I+  +E+AIL+RY PES++ R  L+ DPQ +VA+E V++ G
Sbjct:  268 RCIQSVRYSSPPPAGGGVMLGTEEDGAGKTKDSLQKRRIGLGREKGYLANDIPESERQTFYTTHGRVVRDGGGVEADLKVAAPQASVLEVSLQQQGVFFDFANEWSSKHTYTPGAGVQEGRPLVTDATYQEFVDYVGRKEKEGSVRYDVLFNGALEPLRTALDATEYKKAGKGLDALKAAVREEVSREFNTHKAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAVKEGG 503          
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: B7GBC3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GBC3_PHATC)

HSP 1 Score: 158 bits (400), Expect = 3.930e-40
Identity = 86/214 (40.19%), Postives = 132/214 (61.68%), Query Frame = 1
Query:    1 RCIQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTFKGMDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKGMYNRII 642
            RCIQ VNYK GG      K+ +G G+ AS+V + +RK + TK GR+V DGGGVEAD K++ PK SALE+ L   G + ++A +W+KTH       V +D+ R+F  FV ++QK G  +L A+Y   L  L+  L+ S     EK VE L   + +E+   FD  ++ I+  + + IL+RYLPESM++ + +  D Q + A++LV +K  +++I+
Sbjct:  599 RCIQGVNYKGGGGL----KEENG-GYIASKVADADRKVYYTKAGRMVRDGGGVEADYKIEAPKASALEVTLLRSGMFNEYAAEWSKTHMLTNNFAVDEDIYRNFIAFVDQKQKTGDIELDALYSRPLSDLKKALKRSGYKGAEKEVEVLQANIVREVQKDFDKYRKDIKEDISQGILARYLPESMLIERGMKNDAQVEAAIKLVANKNTFDKIL 807          
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: A0A1E7FC68_9STRA (Peptidase_S41-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FC68_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.160e-38
Identity = 86/214 (40.19%), Postives = 130/214 (60.75%), Query Frame = 1
Query:    1 RCIQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTFKGMDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKGMYNRII 642
            RCIQSVNYKEGG   G ++Q+  +  ++S VP+ +R+ F TK GR V DGGGVEAD KV  PK SALE+ L       +FA QW++ +       VTDD+ R+F++FV  + K G   L A+Y   LD L+  L  S     E+ V+ L  ++ +E    F+  K+ I+  +  +ILSRY+PESM++++ L  D Q Q A++L+ +   +++I+
Sbjct:  322 RCIQSVNYKEGG---GLDEQNGRY--QSSTVPKKDRQVFFTKSGRTVRDGGGVEADYKVAAPKASALEVTLLRSDIMNEFASQWSQKYELTNNFEVTDDIYREFQDFVEVKVKGGDLKLEALYAGALDDLKRALSQSGYKSSEREVDQLKTQIVKESKNDFEKYKKEIKEDIATSILSRYIPESMLMKRSLKTDDQVQEAIKLLANDKSFSKIL 530          
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: A0A7S1B4F4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B4F4_9STRA)

HSP 1 Score: 151 bits (382), Expect = 4.840e-38
Identity = 86/214 (40.19%), Postives = 127/214 (59.35%), Query Frame = 1
Query:    1 RCIQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTFKGMDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKGMYNRII 642
            RCIQS NY EGG +  ++ +     F A++V E ++ E+ T+ GR V DGGG+EADVKV  PK SALE+ L     +  +AG+WTKTH  +    V D+  RDF+NFV + Q++G   L ++Y   L+ L+  L+ S     +K +E L   + +EM   F + K+ I+  L  AILSRYLP SM+L + L  D Q   A +L+ +   +N+I+
Sbjct:  391 RCIQSTNYAEGGGSDAKDGK-----FVATKVEEKDKTEYFTRAGRRVQDGGGIEADVKVPTPKASALEVTLLRSDMFNRYAGEWTKTHKLRDNFAVNDETYRDFQNFVTQTQRDGRVRLESLYLGPLEVLKKELQQSGYTTSKKELEALQNNIVREMERDFVAYKKDIKEDLSTAILSRYLPSSMLLDRSLRTDVQVTAAYKLISNPSKFNKIL 599          
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: A0A1Z5K6G6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K6G6_FISSO)

HSP 1 Score: 148 bits (374), Expect = 1.020e-36
Identity = 83/222 (37.39%), Postives = 128/222 (57.66%), Query Frame = 1
Query:    1 RCIQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTF--------KGMDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKGMYNRII 642
            RCIQ VNYK+G          +GFG    +V E +R  + T+ GR+V DGGG+EADV+V  PK SALE+ L   G + DFA  W++ H          K +DVV DD  + F  +V ++Q++G  +L ++Y   L  L+  L+ S     EK VE L  R+ +++ + F+  ++ +   L ++ILSRYLPESM++ + +  D Q Q A++L+Q  G Y  ++
Sbjct:  514 RCIQGVNYKQG-------DNDNGFG--RQKVAERDRATYYTRMGRLVKDGGGIEADVRVDAPKASALEVTLLRSGIFNDFAALWSQNHKLTDYVNADTKKLDVVNDDTYKQFIAYVKEQQQQGNLELESLYSKPLTDLKKTLKQSGYLGAEKSVEQLQARIVRDIESDFNKYRKDLMEDLSQSILSRYLPESMLIERGVQNDVQVQAAMQLLQTPGKYESLL 726          
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: A0A4D9CU61_9STRA (TSPc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU61_9STRA)

HSP 1 Score: 144 bits (363), Expect = 3.100e-35
Identity = 80/221 (36.20%), Postives = 130/221 (58.82%), Query Frame = 1
Query:   31 GGVAMGEEKQSSGF----------------GFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTF-------KGMDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKG 624
            GGV +G E+  +G                 G+ A+++PE ER+ F T HGRVV DGGGVEAD+KV  P+ S LE++LQ QG +FDFA +W+  HT+       +   +VTD   ++F ++V +++KEG+     ++   L+ L + L+ +      K ++ L   + +E+   F +R+  I+  +E+AIL+RY PES++ R  L+ DPQ +VA+E V++ G
Sbjct:  401 GGVVLGTEEGGAGKAKDSLQKRRIGPGREKGYLANDIPESERQTFYTTHGRVVRDGGGVEADLKVAAPQASVLEVSLQQQGVFFDFANEWSSKHTYTPGAGVQEETPLVTDATYQEFVDYVGRKEKEGSVSYDVLFNGALEPLRTALDATEYKKAGKGLDDLKAAVREEVSREFQTRRAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAVKEGG 621          
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: A0A7S4IQW6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IQW6_9STRA)

HSP 1 Score: 143 bits (360), Expect = 9.640e-35
Identity = 81/216 (37.50%), Postives = 127/216 (58.80%), Query Frame = 1
Query:    1 RCIQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTFKGMDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKGM--YNRII 642
            RCIQS NYKEGG    E+ +     ++ S+V + +++ F TK+GR V DGGG+EAD+KV++P+ SALE+ L   G   DFA  W+K H       V +   R+F+ FV  R KEG  +L A+Y   LD L+  L+ S      K ++ L   + +++   +D+ K+ I+  +  +IL+RYLPESM++ + +  D Q   A ELV  K +  +N+++
Sbjct:  631 RCIQSTNYKEGGGLNAEDGR-----YKVSKVKDKDKQVFYTKNGREVKDGGGIEADLKVEVPRASALEVTLLRSGVMTDFAADWSKKHELTNNFDVDEATYREFQAFVAARDKEGDINLDALYKRPLDDLKKSLDQSGFKGSRKELDALRASIIRDIQRDYDTYKKDIKEDIGNSILARYLPESMLIERSIKTDRQVLAAAELVGPKEVKKFNKLL 841          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L981_9PHAE9.600e-18798.60PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z050_9STRA7.620e-4945.09ClpP/crotonase-like domain-containing protein n=1 ... [more]
W7T550_9STRA4.260e-4137.29Carboxyl-terminal protease (Fragment) n=1 Tax=Nann... [more]
I2CP28_NANGC2.570e-4037.29Carboxyl-terminal protease (Fragment) n=1 Tax=Nann... [more]
B7GBC3_PHATC3.930e-4040.19Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1E7FC68_9STRA1.160e-3840.19Peptidase_S41-domain-containing protein n=1 Tax=Fr... [more]
A0A7S1B4F4_9STRA4.840e-3840.19Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A1Z5K6G6_FISSO1.020e-3637.39Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A4D9CU61_9STRA3.100e-3536.20TSPc domain-containing protein n=1 Tax=Nannochloro... [more]
A0A7S4IQW6_9STRA9.640e-3537.50Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12558contigEcto-sp13_S_contig12558:387..4330 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score544.7
Seed ortholog evalue2.7e-152
Seed eggNOG ortholog2880.D7FJW2
Model size861
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Peptidase family S41
EggNOG OGs2RW0A@2759,COG0793@1
Cds size861
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12558.2119.1prot_Ecto-sp13_S_contig12558.2119.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12558 387..4330 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462669.6468513-CDS-Ecto-sp13_S_contig12558:386..5121681462669.6468513-CDS-Ecto-sp13_S_contig12558:386..512Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12558 387..512 +
1681462669.6623037-CDS-Ecto-sp13_S_contig12558:1211..13011681462669.6623037-CDS-Ecto-sp13_S_contig12558:1211..1301Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12558 1212..1301 +
1681462669.6726472-CDS-Ecto-sp13_S_contig12558:2176..23021681462669.6726472-CDS-Ecto-sp13_S_contig12558:2176..2302Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12558 2177..2302 +
1681462669.6860807-CDS-Ecto-sp13_S_contig12558:2885..30791681462669.6860807-CDS-Ecto-sp13_S_contig12558:2885..3079Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12558 2886..3079 +
1681462669.6960132-CDS-Ecto-sp13_S_contig12558:3338..34621681462669.6960132-CDS-Ecto-sp13_S_contig12558:3338..3462Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12558 3339..3462 +
1681462669.7107742-CDS-Ecto-sp13_S_contig12558:4129..43301681462669.7107742-CDS-Ecto-sp13_S_contig12558:4129..4330Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12558 4130..4330 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12558.2119.1

>prot_Ecto-sp13_S_contig12558.2119.1 ID=prot_Ecto-sp13_S_contig12558.2119.1|Name=mRNA_Ecto-sp13_S_contig12558.2119.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=287bp
RCIQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDG
GGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTFKGMDVVTDDV
LRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLP
KRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVA
LELVQDKGMYNRIITPADAKLTEDVLRSFGQALEDSVQRGDLRLDLSSDD
GAGITITPTSTAAGARPRAEDGGISTGPNRRSLPQR*
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mRNA from alignment at Ecto-sp13_S_contig12558:387..4330+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12558.2119.1 ID=mRNA_Ecto-sp13_S_contig12558.2119.1|Name=mRNA_Ecto-sp13_S_contig12558.2119.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3944bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12558:387..4330+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGGTGCATCCAGAGCGTGAACTATAAGGAGGGTGGTGTGGCCATGGGAGA GGAGAAGCAGAGCAGCGGTTTCGGCTTCGAGGCGAGCGAGGTGCCGGAGC TCGAGCGGAAGGAATTCGTCACCAAGGTGCGTGCCTGGCTCATCTTCAAG AACGTTTTCGTTTTCCTTTCTTTTGTGGGATGCTTTCGTGTACGTTCGAC TTCGAGCTGTTCGTATGGTCGTGTGAGTTATGTTCTTGCTTCTGTTTATC TGCTTGCTGTTTCATTCCTCGTTTTTGTGATTCTCGTCAAAGTGCAGCTC TTTTGTTTGGGTCGTAAATATATTTTTTGTGAGCTGAGCATCATATCATC TATTTTGTCTGGAGACAGCCCTTGGTTGTCACGAAACGCTCACCACCGCC CCGGAGCTTGCGTCGCTCTATTCTCTATCGACGTGCTGTCCCTGGAACTA CTTGGCGTGGAGCAACAATACAAATGTCAATGTCACTCGTTGCCACGGGT AGAGATAACGGCACGATTGTCGCAGATGTAGCTTTCCCGTCACTTTGGGT TGGTGCGCCTTTGGCAAGAGTATGACTCGCTATTGACGGAACAGTTGGCA CATGCACCACCGGTCAGGTAGATTTGGCGTAGCGTTCCACCTCCGCGGAG CCGCCACAAGAATAGTTTATTATTCCAATAATGAATGTTGCCCGAAGAGA ATGAATCAGTCACGGCCACCCTTTGCGTCTCTCTCGATCTGGCTCTTCGA CAACGCCGAGTTCACTCAAGGGCGTGTACCCACGTGGTGTGTTGCTGAAA TATGCCTGCCCTGCTTTTTTCGCAGCACGGTCGAGTGGTTTTCGATGGCG GAGGCGTTGAAGCTGACGTCAAGGTGAAGCTGCCCAAACCATCGGCTCTC GAGATAGCTCTACAGGTGCGTTGGAATGGACTGACTTTTCTTTGGGTAGT GGTGGTGTTTTGTCGGCCGTCCTCGCCGGTGTGACGTGCTTTTTTGAACC GTTGAGATGCGATTGTGTTGTGTCGAAGGTCTATCGAGGATCCTACATCA CCTGAGACTTCTGCTGGAGAGGGGGGGCAGATTATTCATCCGTGGAGGGC GATGGATGCTTGCCTACATTCTTTCAGTAATTTCATCGAAGGGACTATTG CGGCCAAGGCGCGCATTTCGTTATCCCCGACTTGACAAGAGCTGACTGCG TGGGCCGGCTATTTGCCGTACATCGCGGGACTGCGGTCATTGGAACAGAA TACTTTGGTGTGGTATGTGTGTAGTGAACGGTGTACGAAAGTAGTTATTT TTGGCTCTTCGGCGGATGACGTCATGGCAAAAACAGTGGTTATTGTTGGG TGGTCGGGGAGCTGATTTTTAGCTTGAAGTTAACGAGCTGTTTTCGTTCT ATGCATTTTTTGTGCGTGAGTATTTGAAATAGCATCGACCGCGCAGCCGG CTGAGCAATGAGAAGTCGCCAGTATTTTAGCGGGATACGAAGCGCAAACA CGCCTTTCTATTCAAAGGGTTCTACCAACAGGGGGGGAGCAGGAGTTGGA CGATAGTGTCCTGTGTCCTGTTTGTGCAGATTGAGGAGAAGACTCGATAT TTGCGTGTGGTGTCCTGCTTGTGCAGTTCAAGGAGAAAACTCGATGTTTG CGTGCGTGTTGCAGTGCCCTTCTTGTGCGGTACAAAGAGAGGACCCACTG TTTTTGTGTGTGTGTTGCAGTGTCCTGCTTCTCCTGTACAAGAAGGAGAC TCCACGGTTCAAGTGTGTGTCCGTGTTGCTCTCCACCCAGGTGCAAGGAG CCTACTTCGACTTCGCCGGGCAGTGGACCAAGACCCACACGTTCAAGGGG ATGGACGTGGTGACGGACGACGTTCTGAGGGATTTCAAGAACTTCGTCTA CAAGCGGCAGAAGGAGGTGTGTTGTTGGGAGAAGTCGTCGGTGTACTTGT GGTTGTTGCCGCCGCTGCTGGTGCTACTGCTGCTGCTGCTGCTGCTGCTG CTGCTGCTGCTGCTGCTGTTGTTTCACACTGAGAATCCGTTCCGGCATTT ATATCCAGTACGAAAGAGGTCAAATTCAACATTAATATTCTATCTACCTG TGTCGCGCGCCAGTACCGGTGTATGATACGGTTTTTTGTAACACGGTTGT GTCCATGAGCCTCACTTCCGTTCAGCTGGAACTGCCGAGGGCAGTTCATC TGGAGGACTGCAAACTTCGTTCCGCCGCCTTGTCATCGCCTTCTCGCCCA AGCGTCCACCAAGAGAAAGCTCCCTCTACAGGCAGTCCTCATGCACATCA GAAAGGCGCACAAAATTGGAATGATGGTTTTGTAAATGACAGCTTCACAG CGACGCGCCGAGGAACATAGGGATTGAGTTCATGAGCACCGCCGTATTTA CCCGCTTTCTTGCTCACCCTCTGCTGCTGCTCCTGCTGCTGCTGCTACTG CTGTTTGCTGCCGCTCTTTTGTTTCGTGTTCGTCAATTTCATTCGTCAGG GTACGTACGACCTCGCGGCGATTTACGGGCCCCAGTTGGATTCGTTAGAG TCCATCCTGGAGGACTCCAACCTCGGCCACTACGAGAAGCTGGTGGAACC CCTTCCCAAGAGACTAACGCAGGAGATGCTCACCGCCTTCGACTCTCGCA AGGAGCTGATAAGAGCCTCCCTTGAGGAAGCCATCCTTTCCAGGTGAATG TACAGAAGAGCGGGCAAAAGGTAGAAATTGGAAGCGACGGTTTCAGAATG GGTACGACAAGACTTCACACGACGGTCGGAATAACGTGGACATCGTGCCG GAAACCCGTACATGCTACAACACGGCTTCGAAACCGTGCGCAACCGTTTT TTTCTGGAGCCTGACTTGGTTCGAATTGACACCCCCCACCCCCCCAAACG AATACGGAACACGCCTTCTGACGCACCCCGTCATGGACAATTTTGGCCGC AGGTATCTTCCGGAGAGCATGGTGCTTCGGAAGCAACTAGACAGGGACCC GCAGTTTCAAGTCGCCCTCGAGTTGGTCCAGGATAAGGGAATGTACAACC GGATAATCACACCAGCAGACGCCAAGGTACCTGGGACTCTTATTTATTTA GCAGTGACAAAGCATGCCTGTGAAATATGCACTTCAGCAGTTGCCGTTGT TTTCATCCACAGTAAGAACTCCAATAACATGTTGCTGTCCGCAAGGGAAT CCACAAAGAAACATATGCTTCGAAGGCATGTGCTTTCGGCTACGCTACTA ACTCCAAGTTATGTCATTTTCAGTCCGCACGTTGATATTTTGGTTGCAAG GGGGTCCACAATCTCGTTAATAGAGAAACCTTTGTTCCGTGGCAATGTAA CATCGACTTGTACCAACAACTTGGTAGTGCACTGTTTCGTGTTAGATTTC GAGGATGTTTATATCCGAGAATTCTGCAGCATGGAAGAACGTCCACGATT CTTTAGCTCGGGATTTTTCCAATAACGAGATTCCACGTTTTTGATCGCCT CTTGCAGTATCGCCAAAAGAGGACGGGAGGAAATCGAAAGACAGATCCTA TATCGGTAGCTGGCAGAAACACGACGGGTACCCACGTGTTGATTTATCTT TGGTGAGGAGTAGGAAATGTTGACCCGTTTCGGTGGAAGAAATCGCGTTT TTTTTTTCTCCCAAGATGACGCTGATATGAAAAAACACAAGCACGTTCGA TACCACGAAGCCCCCGACTGCTTTCGACGTGCTTCTTCGGCAGCTCACTG AAGACGTTCTCCGGTCGTTCGGCCAAGCCCTGGAAGACTCGGTGCAGAGG GGCGACCTGCGACTGGACTTGTCTTCTGACGACGGGGCGGGGATTACGAT AACGCCAACTTCGACTGCCGCGGGGGCGAGGCCGAGAGCTGAGGACGGGG GCATTTCGACTGGACCTAACCGGCGCTCGTTGCCGCAGCGCTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12558:387..4330+

>mRNA_Ecto-sp13_S_contig12558.2119.1 ID=mRNA_Ecto-sp13_S_contig12558.2119.1|Name=mRNA_Ecto-sp13_S_contig12558.2119.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=861bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12558:387..4330+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGGTGCATCCAGAGCGTGAACTATAAGGAGGGTGGTGTGGCCATGGGAGA
GGAGAAGCAGAGCAGCGGTTTCGGCTTCGAGGCGAGCGAGGTGCCGGAGC
TCGAGCGGAAGGAATTCGTCACCAAGCACGGTCGAGTGGTTTTCGATGGC
GGAGGCGTTGAAGCTGACGTCAAGGTGAAGCTGCCCAAACCATCGGCTCT
CGAGATAGCTCTACAGGTGCAAGGAGCCTACTTCGACTTCGCCGGGCAGT
GGACCAAGACCCACACGTTCAAGGGGATGGACGTGGTGACGGACGACGTT
CTGAGGGATTTCAAGAACTTCGTCTACAAGCGGCAGAAGGAGGGTACGTA
CGACCTCGCGGCGATTTACGGGCCCCAGTTGGATTCGTTAGAGTCCATCC
TGGAGGACTCCAACCTCGGCCACTACGAGAAGCTGGTGGAACCCCTTCCC
AAGAGACTAACGCAGGAGATGCTCACCGCCTTCGACTCTCGCAAGGAGCT
GATAAGAGCCTCCCTTGAGGAAGCCATCCTTTCCAGGTATCTTCCGGAGA
GCATGGTGCTTCGGAAGCAACTAGACAGGGACCCGCAGTTTCAAGTCGCC
CTCGAGTTGGTCCAGGATAAGGGAATGTACAACCGGATAATCACACCAGC
AGACGCCAAGCTCACTGAAGACGTTCTCCGGTCGTTCGGCCAAGCCCTGG
AAGACTCGGTGCAGAGGGGCGACCTGCGACTGGACTTGTCTTCTGACGAC
GGGGCGGGGATTACGATAACGCCAACTTCGACTGCCGCGGGGGCGAGGCC
GAGAGCTGAGGACGGGGGCATTTCGACTGGACCTAACCGGCGCTCGTTGC
CGCAGCGCTGA
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