mRNA_Ecto-sp13_S_contig12558.2119.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: A0A6H5L981_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L981_9PHAE) HSP 1 Score: 547 bits (1409), Expect = 9.600e-187 Identity = 282/286 (98.60%), Postives = 282/286 (98.60%), Query Frame = 1
Query: 1 RCIQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTFKGMDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKGMYNRIITPADAKLTEDVLRSFGQALEDSVQRGDLRLDLSSDDGAGITITPTSTAAGARPRAEDGGISTGPNRRSLPQR 858
RCIQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTFKG DVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKE IRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDK MYNRIITPADAKLTEDVLRSFGQALEDSVQRGDLRLDLSSDDGAGITITPTSTAAGARP AEDGGISTGPNRRSLPQR
Sbjct: 666 RCIQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTFKGTDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKERIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKEMYNRIITPADAKLTEDVLRSFGQALEDSVQRGDLRLDLSSDDGAGITITPTSTAAGARPTAEDGGISTGPNRRSLPQR 951
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: A0A835Z050_9STRA (ClpP/crotonase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z050_9STRA) HSP 1 Score: 182 bits (462), Expect = 7.620e-49 Identity = 101/224 (45.09%), Postives = 138/224 (61.61%), Query Frame = 1
Query: 7 IQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTFKGMDVVTDDV-LRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEK-LVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKGMYNRIITPADAKLTED 672
+ SV GGV G G+ A V E +RKEF T HGRVV DGGG+EADV + S+LE+AL VQ YFD+AG W+ TH FK D V DD DF+ +V ++Q+ G YDL A+Y Q SLES L + L + ++P+ + + EM+ FD++K IR +LE AILSRYLPESM+L++QL D QF++AL +V+D+ Y+ ++ A ED
Sbjct: 527 LSSVEMGGGGVR--------GAGYTARAVREKDRKEFKTTHGRVVRDGGGIEADVVAPEKQTSSLEVALLVQNVYFDYAGHWSATHAFKNTDRVVDDATFNDFRRYVVEKQRAGDYDLLALYQSQFKSLESALTEGGLQNLATGKLDPIKRSVLDEMMRGFDTQKGTIREALENAILSRYLPESMLLKRQLTTDDQFKLALSIVKDRPRYDSLLAGPAADAAED 742
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: W7T550_9STRA (Carboxyl-terminal protease (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T550_9STRA) HSP 1 Score: 155 bits (393), Expect = 4.260e-41 Identity = 88/236 (37.29%), Postives = 138/236 (58.47%), Query Frame = 1
Query: 1 RCIQSVNYKE-----GGVAMGEEKQSSGF----------------GFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTF-------KGMDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKG 624
RCIQSV Y GGV +G E+ +G G+ A+++PE ER+ F T HGRVV DGGGVEAD+KV P+ S LE++LQ QG +FDFA +W+ HT+ +G +VTD ++F ++V +++KEG+ ++ L+ L + L+ + K ++ L + +E+ F++ K I+ +E+AIL+RY PES++ R L+ DPQ +VA+E V++ G
Sbjct: 37 RCIQSVRYSSPPPAGGGVMLGTEEDGAGKTKDSLQKRRIGLGREKGYLANDIPESERQTFYTTHGRVVRDGGGVEADLKVAAPQASVLEVSLQQQGVFFDFANEWSSKHTYTPGAGVQEGRPLVTDATYQEFVDYVGRKEKEGSVRYDVLFNGALEPLRTALDATEYKKAGKGLDALKAAVREEVSREFNTHKAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAVKEGG 272
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: I2CP28_NANGC (Carboxyl-terminal protease (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP28_NANGC) HSP 1 Score: 155 bits (393), Expect = 2.570e-40 Identity = 88/236 (37.29%), Postives = 138/236 (58.47%), Query Frame = 1
Query: 1 RCIQSVNYKE-----GGVAMGEEKQSSGF----------------GFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTF-------KGMDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKG 624
RCIQSV Y GGV +G E+ +G G+ A+++PE ER+ F T HGRVV DGGGVEAD+KV P+ S LE++LQ QG +FDFA +W+ HT+ +G +VTD ++F ++V +++KEG+ ++ L+ L + L+ + K ++ L + +E+ F++ K I+ +E+AIL+RY PES++ R L+ DPQ +VA+E V++ G
Sbjct: 268 RCIQSVRYSSPPPAGGGVMLGTEEDGAGKTKDSLQKRRIGLGREKGYLANDIPESERQTFYTTHGRVVRDGGGVEADLKVAAPQASVLEVSLQQQGVFFDFANEWSSKHTYTPGAGVQEGRPLVTDATYQEFVDYVGRKEKEGSVRYDVLFNGALEPLRTALDATEYKKAGKGLDALKAAVREEVSREFNTHKAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAVKEGG 503
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: B7GBC3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GBC3_PHATC) HSP 1 Score: 158 bits (400), Expect = 3.930e-40 Identity = 86/214 (40.19%), Postives = 132/214 (61.68%), Query Frame = 1
Query: 1 RCIQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTFKGMDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKGMYNRII 642
RCIQ VNYK GG K+ +G G+ AS+V + +RK + TK GR+V DGGGVEAD K++ PK SALE+ L G + ++A +W+KTH V +D+ R+F FV ++QK G +L A+Y L L+ L+ S EK VE L + +E+ FD ++ I+ + + IL+RYLPESM++ + + D Q + A++LV +K +++I+
Sbjct: 599 RCIQGVNYKGGGGL----KEENG-GYIASKVADADRKVYYTKAGRMVRDGGGVEADYKIEAPKASALEVTLLRSGMFNEYAAEWSKTHMLTNNFAVDEDIYRNFIAFVDQKQKTGDIELDALYSRPLSDLKKALKRSGYKGAEKEVEVLQANIVREVQKDFDKYRKDIKEDISQGILARYLPESMLIERGMKNDAQVEAAIKLVANKNTFDKIL 807
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: A0A1E7FC68_9STRA (Peptidase_S41-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FC68_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.160e-38 Identity = 86/214 (40.19%), Postives = 130/214 (60.75%), Query Frame = 1
Query: 1 RCIQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTFKGMDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKGMYNRII 642
RCIQSVNYKEGG G ++Q+ + ++S VP+ +R+ F TK GR V DGGGVEAD KV PK SALE+ L +FA QW++ + VTDD+ R+F++FV + K G L A+Y LD L+ L S E+ V+ L ++ +E F+ K+ I+ + +ILSRY+PESM++++ L D Q Q A++L+ + +++I+
Sbjct: 322 RCIQSVNYKEGG---GLDEQNGRY--QSSTVPKKDRQVFFTKSGRTVRDGGGVEADYKVAAPKASALEVTLLRSDIMNEFASQWSQKYELTNNFEVTDDIYREFQDFVEVKVKGGDLKLEALYAGALDDLKRALSQSGYKSSEREVDQLKTQIVKESKNDFEKYKKEIKEDIATSILSRYIPESMLMKRSLKTDDQVQEAIKLLANDKSFSKIL 530
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: A0A7S1B4F4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B4F4_9STRA) HSP 1 Score: 151 bits (382), Expect = 4.840e-38 Identity = 86/214 (40.19%), Postives = 127/214 (59.35%), Query Frame = 1
Query: 1 RCIQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTFKGMDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKGMYNRII 642
RCIQS NY EGG + ++ + F A++V E ++ E+ T+ GR V DGGG+EADVKV PK SALE+ L + +AG+WTKTH + V D+ RDF+NFV + Q++G L ++Y L+ L+ L+ S +K +E L + +EM F + K+ I+ L AILSRYLP SM+L + L D Q A +L+ + +N+I+
Sbjct: 391 RCIQSTNYAEGGGSDAKDGK-----FVATKVEEKDKTEYFTRAGRRVQDGGGIEADVKVPTPKASALEVTLLRSDMFNRYAGEWTKTHKLRDNFAVNDETYRDFQNFVTQTQRDGRVRLESLYLGPLEVLKKELQQSGYTTSKKELEALQNNIVREMERDFVAYKKDIKEDLSTAILSRYLPSSMLLDRSLRTDVQVTAAYKLISNPSKFNKIL 599
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: A0A1Z5K6G6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K6G6_FISSO) HSP 1 Score: 148 bits (374), Expect = 1.020e-36 Identity = 83/222 (37.39%), Postives = 128/222 (57.66%), Query Frame = 1
Query: 1 RCIQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTF--------KGMDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKGMYNRII 642
RCIQ VNYK+G +GFG +V E +R + T+ GR+V DGGG+EADV+V PK SALE+ L G + DFA W++ H K +DVV DD + F +V ++Q++G +L ++Y L L+ L+ S EK VE L R+ +++ + F+ ++ + L ++ILSRYLPESM++ + + D Q Q A++L+Q G Y ++
Sbjct: 514 RCIQGVNYKQG-------DNDNGFG--RQKVAERDRATYYTRMGRLVKDGGGIEADVRVDAPKASALEVTLLRSGIFNDFAALWSQNHKLTDYVNADTKKLDVVNDDTYKQFIAYVKEQQQQGNLELESLYSKPLTDLKKTLKQSGYLGAEKSVEQLQARIVRDIESDFNKYRKDLMEDLSQSILSRYLPESMLIERGVQNDVQVQAAMQLLQTPGKYESLL 726
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: A0A4D9CU61_9STRA (TSPc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU61_9STRA) HSP 1 Score: 144 bits (363), Expect = 3.100e-35 Identity = 80/221 (36.20%), Postives = 130/221 (58.82%), Query Frame = 1
Query: 31 GGVAMGEEKQSSGF----------------GFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTF-------KGMDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKG 624
GGV +G E+ +G G+ A+++PE ER+ F T HGRVV DGGGVEAD+KV P+ S LE++LQ QG +FDFA +W+ HT+ + +VTD ++F ++V +++KEG+ ++ L+ L + L+ + K ++ L + +E+ F +R+ I+ +E+AIL+RY PES++ R L+ DPQ +VA+E V++ G
Sbjct: 401 GGVVLGTEEGGAGKAKDSLQKRRIGPGREKGYLANDIPESERQTFYTTHGRVVRDGGGVEADLKVAAPQASVLEVSLQQQGVFFDFANEWSSKHTYTPGAGVQEETPLVTDATYQEFVDYVGRKEKEGSVSYDVLFNGALEPLRTALDATEYKKAGKGLDDLKAAVREEVSREFQTRRAQIKEEVEQAILARYQPESLLRRLALEGDPQVKVAVEAVKEGG 621
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Match: A0A7S4IQW6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IQW6_9STRA) HSP 1 Score: 143 bits (360), Expect = 9.640e-35 Identity = 81/216 (37.50%), Postives = 127/216 (58.80%), Query Frame = 1
Query: 1 RCIQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGGGVEADVKVKLPKPSALEIALQVQGAYFDFAGQWTKTHTFKGMDVVTDDVLRDFKNFVYKRQKEGTYDLAAIYGPQLDSLESILEDSNLGHYEKLVEPLPKRLTQEMLTAFDSRKELIRASLEEAILSRYLPESMVLRKQLDRDPQFQVALELVQDKGM--YNRII 642
RCIQS NYKEGG E+ + ++ S+V + +++ F TK+GR V DGGG+EAD+KV++P+ SALE+ L G DFA W+K H V + R+F+ FV R KEG +L A+Y LD L+ L+ S K ++ L + +++ +D+ K+ I+ + +IL+RYLPESM++ + + D Q A ELV K + +N+++
Sbjct: 631 RCIQSTNYKEGGGLNAEDGR-----YKVSKVKDKDKQVFYTKNGREVKDGGGIEADLKVEVPRASALEVTLLRSGVMTDFAADWSKKHELTNNFDVDEATYREFQAFVAARDKEGDINLDALYKRPLDDLKKSLDQSGFKGSRKELDALRASIIRDIQRDYDTYKKDIKEDIGNSILARYLPESMLIERSIKTDRQVLAAAELVGPKEVKKFNKLL 841 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12558.2119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12558.2119.1 >prot_Ecto-sp13_S_contig12558.2119.1 ID=prot_Ecto-sp13_S_contig12558.2119.1|Name=mRNA_Ecto-sp13_S_contig12558.2119.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=287bp RCIQSVNYKEGGVAMGEEKQSSGFGFEASEVPELERKEFVTKHGRVVFDGback to top mRNA from alignment at Ecto-sp13_S_contig12558:387..4330+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12558.2119.1 ID=mRNA_Ecto-sp13_S_contig12558.2119.1|Name=mRNA_Ecto-sp13_S_contig12558.2119.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3944bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12558:387..4330+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12558:387..4330+ >mRNA_Ecto-sp13_S_contig12558.2119.1 ID=mRNA_Ecto-sp13_S_contig12558.2119.1|Name=mRNA_Ecto-sp13_S_contig12558.2119.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=861bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12558:387..4330+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |