prot_Ecto-sp13_S_contig95461.21156.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig95461.21156.1
Unique Nameprot_Ecto-sp13_S_contig95461.21156.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length57
Homology
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BLAST of mRNA_Ecto-sp13_S_contig95461.21156.1 vs. uniprot
Match: D8LU44_ECTSI (Calpain catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU44_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.040e-19
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 0 
Query:    8 GAWDQSSAGGALGRPLFYTNPQYAVVLTQKTKVHIEVRAPKD 49
            GAWDQSSAGGALGRPLFYTNPQYAVVLTQKTKVHIEVRAPKD
Sbjct:  251 GAWDQSSAGGALGRPLFYTNPQYAVVLTQKTKVHIEVRAPKD 292
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BLAST of mRNA_Ecto-sp13_S_contig95461.21156.1 vs. uniprot
Match: D8LU46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU46_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.210e-15
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 0 
Query:    8 GAWDQSSAGGALGRPLFYTNPQYAVVLTQ-KTKVHIEVRAPKD 49
            GAWDQSSAGGALG P FYTNPQYA+VLTQ +TKVH+EVRAPKD
Sbjct:  301 GAWDQSSAGGALGTPFFYTNPQYALVLTQPETKVHVEVRAPKD 343
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BLAST of mRNA_Ecto-sp13_S_contig95461.21156.1 vs. uniprot
Match: A0A6H5KSF9_9PHAE (Calpain catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF9_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 2.330e-15
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 0 
Query:   14 SAGGALGRPLFYTNPQYAVVLTQKTKVHIEVRAPKDVSETKIG 56
            SAGGALG PLFYTNPQYAVVLTQKTKVHIEVRAPKD++ T + 
Sbjct:  263 SAGGALGSPLFYTNPQYAVVLTQKTKVHIEVRAPKDINATVVS 305
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig95461.21156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LU44_ECTSI1.040e-19100.00Calpain catalytic domain-containing protein n=1 Ta... [more]
D8LU46_ECTSI1.210e-1586.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSF9_9PHAE2.330e-1583.72Calpain catalytic domain-containing protein n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.380coord: 4..57
e-value: 4.6E-9
score: 38.1
IPR036213Calpain large subunit, domain III superfamilySUPERFAMILY49758Calpain large subunit, middle domain (domain III)coord: 5..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig95461contigEcto-sp13_S_contig95461:84..254 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig95461.21156.1mRNA_Ecto-sp13_S_contig95461.21156.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig95461 84..254 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig95461.21156.1 ID=prot_Ecto-sp13_S_contig95461.21156.1|Name=mRNA_Ecto-sp13_S_contig95461.21156.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=57bp
LLGLLFQGAWDQSSAGGALGRPLFYTNPQYAVVLTQKTKVHIEVRAPKDV
SETKIGF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036213Calpain_III_sf