prot_Ecto-sp13_S_contig12552.2114.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12552.2114.1
Unique Nameprot_Ecto-sp13_S_contig12552.2114.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length236
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12552.2114.1 vs. uniprot
Match: A0A6H5LCA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCA0_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 3.380e-63
Identity = 177/228 (77.63%), Postives = 180/228 (78.95%), Query Frame = 0 
Query:    1 MSGSQWEALPQRARKRRPAASASATPAVENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQHDPCRGNASSLVSGGGNACSLAKPTGGATPVDGSVVRDDGRGREDDWVVEGRGSAEDGGGEGGDKAAAVAARHAAVTAEVDARSKIKRFSGGLEGGAGADGGAEGANFEYLD 228
            MS SQWEALPQRARKRRPA +ASATPAV N XXXXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXX                               DQHDPCRGNASSLVS G NACSLAKPTG ATPVDG VVRDDGRGREDD VVEGRGSAED GG+GGDKAAAVAARHAAVTAEVDARSKIKRFSGGLEGGAGADGGAEGANFE+ D
Sbjct:    1 MSSSQWEALPQRARKRRPATAASATPAVGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASVTRXXXXXXXXXXXXXXXXXXXLVPVVGVAEGGHGNQQPRRTSSGGPKESGGRDQHDPCRGNASSLVSVGDNACSLAKPTGAATPVDGGVVRDDGRGREDDRVVEGRGSAEDTGGKGGDKAAAVAARHAAVTAEVDARSKIKRFSGGLEGGAGADGGAEGANFEWGD 228
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BLAST of mRNA_Ecto-sp13_S_contig12552.2114.1 vs. uniprot
Match: D8LMN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN9_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 3.170e-24
Identity = 59/78 (75.64%), Postives = 59/78 (75.64%), Query Frame = 0 
Query:  159 REDDWVVEGRGSAEDGGGEGGDKAAAVAARHAAVTAEVDARSKIKRFSGGLEGGAGADGGAEGANFEYLDHTADVQLH 236
            REDD V EGRGSA D              RHAAV AEVDARSKI RFSGGLEGGAGADGGAEGANFEYLDHTADVQLH
Sbjct:  105 REDDRVAEGRGSAADSXXXXXXXXXXXXXRHAAVAAEVDARSKIPRFSGGLEGGAGADGGAEGANFEYLDHTADVQLH 182
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12552.2114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LCA0_9PHAE3.380e-6377.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMN9_ECTSI3.170e-2475.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12552contigEcto-sp13_S_contig12552:3081..5011 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12552.2114.1mRNA_Ecto-sp13_S_contig12552.2114.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12552 3081..5011 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12552.2114.1 ID=prot_Ecto-sp13_S_contig12552.2114.1|Name=mRNA_Ecto-sp13_S_contig12552.2114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=236bp
MSGSQWEALPQRARKRRPAASASATPAVENAPPQPPPPDQQRQREEKVAS
AAPPAPPKLAAVARATPASGAAAAAAAATVAAGLVPVAGVAEGGHGNQQP
RRTSSGGREESGGGDQHDPCRGNASSLVSGGGNACSLAKPTGGATPVDGS
VVRDDGRGREDDWVVEGRGSAEDGGGEGGDKAAAVAARHAAVTAEVDARS
KIKRFSGGLEGGAGADGGAEGANFEYLDHTADVQLH
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