mRNA_Ecto-sp13_S_contig9322.20920.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9322.20920.1 vs. uniprot
Match: A0A6H5L4V8_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4V8_9PHAE) HSP 1 Score: 103 bits (257), Expect = 2.620e-24 Identity = 52/63 (82.54%), Postives = 53/63 (84.13%), Query Frame = 1
Query: 16 CPSLL-----PVPARTVAETLDAMKYHDAGAFVSDVRLIFDNARKYNPPKHPIHVAASKLAKV 189
CP L P+ TVAETLDAMKYHDAGAFVSDVRLIFDNARKYNPPKHPIHVAASKLAKV
Sbjct: 1681 CPDYLVVIEQPMDLGTVAETLDAMKYHDAGAFVSDVRLIFDNARKYNPPKHPIHVAASKLAKV 1743
BLAST of mRNA_Ecto-sp13_S_contig9322.20920.1 vs. uniprot
Match: D7FK58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK58_ECTSI) HSP 1 Score: 102 bits (253), Expect = 9.040e-24 Identity = 51/62 (82.26%), Postives = 52/62 (83.87%), Query Frame = 1
Query: 16 CPSLL-----PVPARTVAETLDAMKYHDAGAFVSDVRLIFDNARKYNPPKHPIHVAASKLAK 186
CP L P+ TVAETLDAMKYHDAGAFVSDVRLIFDNARKYNPPKHPIHVAASKLAK
Sbjct: 88 CPDYLMVIEQPMDLGTVAETLDAMKYHDAGAFVSDVRLIFDNARKYNPPKHPIHVAASKLAK 149
BLAST of mRNA_Ecto-sp13_S_contig9322.20920.1 vs. uniprot
Match: A0A7S2B241_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B241_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 4.130e-10 Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query: 31 PVPARTVAETLDAMKYHDAGAFVSDVRLIFDNARKYNPPKHPIHVAASKL 180
P+ TVA L +YH ++DVRL+F NA+KYNPPKHP+HVAA L
Sbjct: 162 PMDLSTVANKLRTGQYHMVKDMIADVRLVFSNAKKYNPPKHPVHVAACTL 211
BLAST of mRNA_Ecto-sp13_S_contig9322.20920.1 vs. uniprot
Match: A0A8C5C2B3_GADMO (Bromodomain-containing protein 3-like n=2 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5C2B3_GADMO) HSP 1 Score: 58.2 bits (139), Expect = 2.490e-8 Identity = 27/54 (50.00%), Postives = 33/54 (61.11%), Query Frame = 1
Query: 28 LPVPARTVAETLDAMKYHDAGAFVSDVRLIFDNARKYNPPKHPIHVAASKLAKV 189
LP+ +V + +D KYHD AF +DVRLIF N KYNPP H + A KL V
Sbjct: 313 LPMDLGSVKKKMDERKYHDTQAFAADVRLIFSNCYKYNPPDHEVVAMARKLQDV 366
BLAST of mRNA_Ecto-sp13_S_contig9322.20920.1 vs. uniprot
Match: A0A7S1GYD1_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GYD1_HEMAN) HSP 1 Score: 57.4 bits (137), Expect = 3.210e-8 Identity = 27/53 (50.94%), Postives = 31/53 (58.49%), Query Frame = 1
Query: 31 PVPARTVAETLDAMKYHDAGAFVSDVRLIFDNARKYNPPKHPIHVAASKLAKV 189
P+ TV LD Y F DVR FDNA YNPPKHP+H+AA KL +V
Sbjct: 152 PMDLGTVQARLDQSLYLSPEEFGEDVRRTFDNAMSYNPPKHPVHIAAKKLLRV 204
BLAST of mRNA_Ecto-sp13_S_contig9322.20920.1 vs. uniprot
Match: A0A6J2UZY5_CHACN (bromodomain-containing protein 3-like n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2UZY5_CHACN) HSP 1 Score: 56.2 bits (134), Expect = 1.190e-7 Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 1
Query: 31 PVPARTVAETLDAMKYHDAGAFVSDVRLIFDNARKYNPPKHPIHVAASKLAKV 189
P+ T+ + +D +YHDA +F +DVRL+F N KYNPP H + A KL V
Sbjct: 339 PMDLSTIKKKMDGREYHDAQSFAADVRLMFSNCYKYNPPDHEVVAMARKLQDV 391
BLAST of mRNA_Ecto-sp13_S_contig9322.20920.1 vs. uniprot
Match: A0A6J0V6P8_9SAUR (bromodomain-containing protein 3 n=1 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0V6P8_9SAUR) HSP 1 Score: 56.2 bits (134), Expect = 1.190e-7 Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 1
Query: 31 PVPARTVAETLDAMKYHDAGAFVSDVRLIFDNARKYNPPKHPIHVAASKLAKV 189
P+ TV + +D+ +YHDA F +D+RL+F N KYNPP H + A KL V
Sbjct: 341 PMDLSTVKKKMDSREYHDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDV 393
BLAST of mRNA_Ecto-sp13_S_contig9322.20920.1 vs. uniprot
Match: A0A8J4XB01_CLAMG (Bromodomain-containing protein 4-like isoform X1 (Fragment) n=1 Tax=Clarias magur TaxID=1594786 RepID=A0A8J4XB01_CLAMG) HSP 1 Score: 56.2 bits (134), Expect = 1.210e-7 Identity = 26/53 (49.06%), Postives = 32/53 (60.38%), Query Frame = 1
Query: 31 PVPARTVAETLDAMKYHDAGAFVSDVRLIFDNARKYNPPKHPIHVAASKLAKV 189
P+ T+ E LD +Y DA F +DVRL+F N KYNPP H + V A KL V
Sbjct: 513 PMDLTTIKERLDTRQYRDAQEFAADVRLMFSNCYKYNPPDHEVVVMARKLQDV 565
BLAST of mRNA_Ecto-sp13_S_contig9322.20920.1 vs. uniprot
Match: A0A7N8XIQ7_9TELE (Bromodomain-containing protein 3-like n=1 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A7N8XIQ7_9TELE) HSP 1 Score: 55.8 bits (133), Expect = 1.610e-7 Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 1
Query: 31 PVPARTVAETLDAMKYHDAGAFVSDVRLIFDNARKYNPPKHPIHVAASKL 180
P+ TV + +DA +Y DA AF +DVRLIF N KYNPP H + A KL
Sbjct: 312 PMDLSTVKKKMDAGEYQDAQAFAADVRLIFSNCYKYNPPNHDVVSKARKL 361
BLAST of mRNA_Ecto-sp13_S_contig9322.20920.1 vs. uniprot
Match: UPI00145B7FE5 (bromodomain-containing protein 3-like n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=UPI00145B7FE5) HSP 1 Score: 55.8 bits (133), Expect = 1.620e-7 Identity = 25/50 (50.00%), Postives = 32/50 (64.00%), Query Frame = 1
Query: 31 PVPARTVAETLDAMKYHDAGAFVSDVRLIFDNARKYNPPKHPIHVAASKL 180
P+ T+ + +DA +Y DA AF +DVRLIF N KYNPP H + A KL
Sbjct: 277 PMDLGTIKQKMDARQYPDAQAFAADVRLIFSNCYKYNPPTHDVVAKARKL 326 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9322.20920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9322.20920.1 >prot_Ecto-sp13_S_contig9322.20920.1 ID=prot_Ecto-sp13_S_contig9322.20920.1|Name=mRNA_Ecto-sp13_S_contig9322.20920.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=63bp MFFLCCPSLLPVPARTVAETLDAMKYHDAGAFVSDVRLIFDNARKYNPPKback to top mRNA from alignment at Ecto-sp13_S_contig9322:5390..5578+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9322.20920.1 ID=mRNA_Ecto-sp13_S_contig9322.20920.1|Name=mRNA_Ecto-sp13_S_contig9322.20920.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=189bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9322:5390..5578+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9322:5390..5578+ >mRNA_Ecto-sp13_S_contig9322.20920.1 ID=mRNA_Ecto-sp13_S_contig9322.20920.1|Name=mRNA_Ecto-sp13_S_contig9322.20920.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=189bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9322:5390..5578+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |