prot_Ecto-sp13_S_contig9309.20901.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9309.20901.1
Unique Nameprot_Ecto-sp13_S_contig9309.20901.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length250
Homology
BLAST of mRNA_Ecto-sp13_S_contig9309.20901.1 vs. uniprot
Match: D7G8N6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8N6_ECTSI)

HSP 1 Score: 409 bits (1052), Expect = 6.720e-143
Identity = 202/215 (93.95%), Postives = 206/215 (95.81%), Query Frame = 0
Query:   35 MIRPVGVTYQSGIGKSTLIKSWSMRYTKTRRRPQPKQPLPGAKELTPAEKEDAVAAAKKQADYNPEPWKNNGVWDNKIVSFVVNGEAWHSRERMYGLLHHYHSGSAHTKCHMMGNSLADRILVDDRVTEKLSESTWTTTALHHGLQYGTQGPLTHPRHVVTHWTGLGAVATRDSVVSEGDNMSSLGADHADKKRWADLELPFADFLLNARLVLTR 249
            MIRPVGVTYQSGIGKSTLIKSWSMRYTKTRRRP   QPLPGAKELTP EK+ AVAAAKKQADYNPEPWKNNGVW+NKIVSFVVNGEAWHSRERMYGLLHHYHSGSAHTKCHMMGNSLADRILVDDRVTEKLSESTWTTTALHHGLQYGTQGPLTHPR+    WTGLGAVATRDSVV+EGDNMSSLGADHADKKRWADLELPFADFLLNARLVLTR
Sbjct:    1 MIRPVGVTYQSGIGKSTLIKSWSMRYTKTRRRP---QPLPGAKELTPTEKQAAVAAAKKQADYNPEPWKNNGVWENKIVSFVVNGEAWHSRERMYGLLHHYHSGSAHTKCHMMGNSLADRILVDDRVTEKLSESTWTTTALHHGLQYGTQGPLTHPRNERNKWTGLGAVATRDSVVAEGDNMSSLGADHADKKRWADLELPFADFLLNARLVLTR 212          
BLAST of mRNA_Ecto-sp13_S_contig9309.20901.1 vs. uniprot
Match: A0A6H5LBR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBR7_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 1.200e-104
Identity = 158/195 (81.03%), Postives = 160/195 (82.05%), Query Frame = 0
Query:   35 MIRPVGVTYQSGIGKSTLIKSWSMRYTKTRRRPQ---------------------------------PKQPLPGAKELTPAEKEDAVAAAKKQADYNPEPWKNNGVWDNKIVSFVVNGEAWHSRERMYGLLHHYHSGSAHTKCHMMGNSLADRILVDDRVTEKLSESTWTTTALHHGLQYGTQGPLTHPRHVVTH 196
            MIRPVGVTYQSGIGKSTLIKSWSMRYTKTRRRPQ                                 PKQ LPGAKELTPAEK+ AVAAAKKQADYNPEPWKNNGVW+NKIVSFVVNGEAWHSRERMYGLLHHYHSGSAHTKCHMMGNSLADRILVDDRVTEKLSESTWTTTALHHGLQYGTQGPLTHPRHVVTH
Sbjct:    1 MIRPVGVTYQSGIGKSTLIKSWSMRYTKTRRRPQQMTRSRRFLSPLVRSCAQSHRFINNCHTVDRSKPKQSLPGAKELTPAEKQAAVAAAKKQADYNPEPWKNNGVWENKIVSFVVNGEAWHSRERMYGLLHHYHSGSAHTKCHMMGNSLADRILVDDRVTEKLSESTWTTTALHHGLQYGTQGPLTHPRHVVTH 195          
BLAST of mRNA_Ecto-sp13_S_contig9309.20901.1 vs. uniprot
Match: A0A6H5J9N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9N5_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 2.250e-45
Identity = 95/235 (40.43%), Postives = 128/235 (54.47%), Query Frame = 0
Query:   16 PLYETRHYYVNVEKCLLDLMIRPVGVTYQSGIGKSTLIKSWSMRYTKTRRRPQPKQPLPGAKELTPAEKEDAVAAAKKQADYNPEPWKNNGVWDNKIVSFVVNGEAWHSRERMYGLLHHYHSGSAHTKCHMMGNSLADRILVDDRVTEKLSESTWTTTALHHGLQYGTQGPLTHPRHVVTHWTGLGAVATRDSVVSEGDNMSSLG-ADHADKKRWADLELPFADFLLNARLVLTR 249
            P+ E R YY++V+ CLL+ + R  G TY+ G+     IK WSM YTKTR              +  +           ++  + +       W+ +  SF+VNG+           LH Y + S+H KCH++GNSL  RI  D+ + +KL ESTWTTT LH  L  GT GPLT+PR     W G+G  A+  SVV+E  NM+ LG ADHA   RW +L+LP ADF+L AR VL R
Sbjct:   65 PMREERRYYIDVKTCLLEHVTRQPGSTYEEGVVFP--IKFWSMSYTKTR-------------SIGRSSXXXXXXXXXXRSGSDADTSHGKPKWEVRFQSFIVNGKEVTDPASQMSFLHVYLTCSSHAKCHVLGNSLVQRIYSDELLKDKLMESTWTTTWLHSALMEGTHGPLTYPRTTTNKWMGIGCPASHKSVVAETLNMTPLGGADHARTARWTELDLPLADFMLGARRVLLR 284          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9309.20901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G8N6_ECTSI6.720e-14393.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LBR7_9PHAE1.200e-10481.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9N5_9PHAE2.250e-4540.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9309contigEcto-sp13_S_contig9309:4801..6369 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9309.20901.1mRNA_Ecto-sp13_S_contig9309.20901.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9309 4801..6369 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9309.20901.1 ID=prot_Ecto-sp13_S_contig9309.20901.1|Name=mRNA_Ecto-sp13_S_contig9309.20901.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=250bp
AAFKSLPGCTTNDGLPLYETRHYYVNVEKCLLDLMIRPVGVTYQSGIGKS
TLIKSWSMRYTKTRRRPQPKQPLPGAKELTPAEKEDAVAAAKKQADYNPE
PWKNNGVWDNKIVSFVVNGEAWHSRERMYGLLHHYHSGSAHTKCHMMGNS
LADRILVDDRVTEKLSESTWTTTALHHGLQYGTQGPLTHPRHVVTHWTGL
GAVATRDSVVSEGDNMSSLGADHADKKRWADLELPFADFLLNARLVLTR*
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