prot_Ecto-sp13_S_contig9270.20862.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9270.20862.1
Unique Nameprot_Ecto-sp13_S_contig9270.20862.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length188
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9270.20862.1 vs. uniprot
Match: A0A6H5L6K6_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6K6_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 1.010e-68
Identity = 150/196 (76.53%), Postives = 158/196 (80.61%), Query Frame = 0 
Query:    2 NPARWAGAIPLPGLVAAATGXXXXXXXAVASVCRPLSPGRLGGNNGDDYSDNKSDGSS------------YGSGRFDDDDNTRNRSSSRGRPMGAAARPAAAPGPRTTSWEDTEEDSSCDGEAGEECDSATPGSSATAPAWMGGSTAALAPGGPMNAKGVPTNGTPGVATRRESGLQRHESGLESALSENERRGTA 185
            NPARWAGAIPLPGLVAAATG XXXXXX   SVCRPLSPGR GGNN +D SD+KSDG+               SGR D+DD TR+RSSSRGRP+GA ARPAAAPGPR TSWEDTEEDSS DG  GEECD  TPGS A APAWMGGSTAALAP GPMNAKGVPTNGT GVATRRE+G QR ESGLESALSE+ER GTA
Sbjct: 1981 NPARWAGAIPLPGLVAAATGGXXXXXXXX-SVCRPLSPGRPGGNNSNDDSDDKSDGNDDXXXXXXXXXXXXXSGRLDEDD-TRSRSSSRGRPLGAVARPAAAPGPRRTSWEDTEEDSSTDGAEGEECDPTTPGSPAPAPAWMGGSTAALAPRGPMNAKGVPTNGTRGVATRRENGFQRRESGLESALSEDERGGTA 2174
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BLAST of mRNA_Ecto-sp13_S_contig9270.20862.1 vs. uniprot
Match: D7FU64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU64_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 6.300e-29
Identity = 68/84 (80.95%), Postives = 69/84 (82.14%), Query Frame = 0 
Query:  103 EEDSSCDGEAGEECDSATPGSSATAPAWMGGSTAALAPGGPMNAKGVPTNGTPGVATRRESGLQRHESGLESALSENERRGTAA 186
            EEDSSCDG  GEECDSATPGS   APAWMG STAA APG P NA GVPT GTPGVATRRESGLQR  SGLESALSE+ER GT A
Sbjct:    2 EEDSSCDGAEGEECDSATPGS--PAPAWMGESTAATAPGPPTNATGVPTKGTPGVATRRESGLQRXXSGLESALSEDERGGTVA 83
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9270.20862.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6K6_9PHAE1.010e-6876.53Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
D7FU64_ECTSI6.300e-2980.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.533

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9270contigEcto-sp13_S_contig9270:4951..6268 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9270.20862.1mRNA_Ecto-sp13_S_contig9270.20862.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9270 4951..6269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9270.20862.1 ID=prot_Ecto-sp13_S_contig9270.20862.1|Name=mRNA_Ecto-sp13_S_contig9270.20862.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=188bp
ANPARWAGAIPLPGLVAAATGGAGGGGGAVASVCRPLSPGRLGGNNGDDY
SDNKSDGSSYGSGRFDDDDNTRNRSSSRGRPMGAAARPAAAPGPRTTSWE
DTEEDSSCDGEAGEECDSATPGSSATAPAWMGGSTAALAPGGPMNAKGVP
TNGTPGVATRRESGLQRHESGLESALSENERRGTAAAA
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