prot_Ecto-sp13_S_contig918.20751.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig918.20751.1
Unique Name	prot_Ecto-sp13_S_contig918.20751.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	108

Homology

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BLAST of mRNA_Ecto-sp13_S_contig918.20751.1 vs. uniprot
Match: A0A6H5JS23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS23_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 1.870e-70
Identity = 103/107 (96.26%), Postives = 105/107 (98.13%), Query Frame = 0

Query:    1 MSLTTRETSTSRVDPVAVKRMTPFVRPPINPEQLPPDFLALLSLTFGVAGLMLKSTWASWASVFCCMSSLGNIKVHEADPKQIGCSVLFACMGLFMNYFGPASRPIV 107
            MSLTT+E STSRVDPVAVKR+TPFVRPPINPEQLPPDFLALLSLTFGVAGLMLKSTW SWASVFCCMSSLGNIKVHEADPKQIGCSVLFACMGLFMNYFGPASRPIV
Sbjct:    1 MSLTTQEPSTSRVDPVAVKRITPFVRPPINPEQLPPDFLALLSLTFGVAGLMLKSTWTSWASVFCCMSSLGNIKVHEADPKQIGCSVLFACMGLFMNYFGPASRPIV 107

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BLAST of mRNA_Ecto-sp13_S_contig918.20751.1 vs. uniprot
Match: D7FWB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWB2_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 4.920e-70
Identity = 104/107 (97.20%), Postives = 106/107 (99.07%), Query Frame = 0

Query:    1 MSLTTRETSTSRVDPVAVKRMTPFVRPPINPEQLPPDFLALLSLTFGVAGLMLKSTWASWASVFCCMSSLGNIKVHEADPKQIGCSVLFACMGLFMNYFGPASRPIV 107
            MSLTTRE STSRVDPVAVKR+TPFVRPPINPEQLPPD+LALLSLTFGVAGLMLKSTWASWASVFCCMSSLGNIKVHEADPKQIGCSVLFACMGLFMNYFGPASRPIV
Sbjct:   84 MSLTTREPSTSRVDPVAVKRITPFVRPPINPEQLPPDYLALLSLTFGVAGLMLKSTWASWASVFCCMSSLGNIKVHEADPKQIGCSVLFACMGLFMNYFGPASRPIV 190

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BLAST of mRNA_Ecto-sp13_S_contig918.20751.1 vs. uniprot
Match: A0A7S2Y0W3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0W3_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.830e-31
Identity = 52/81 (64.20%), Postives = 62/81 (76.54%), Query Frame = 0

Query:   24 FVRPPINPEQLPPDFLALLSLTFGVAGLMLKSTWASWASVFCCMSSLGNIKVHEADPKQIGCSVLFACMGLFMNYFGPASR 104
            F R  ++P+QLPPD++ALLSL FG+ GLMLK    +W SVFCCMSS+ NIK  E D KQI CSV+FA MGLFMNYFGP  +
Sbjct:   24 FYREKLDPDQLPPDYIALLSLVFGIMGLMLKYKLCAWLSVFCCMSSMANIKNSEMDIKQIACSVMFAMMGLFMNYFGPTPK 104

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BLAST of mRNA_Ecto-sp13_S_contig918.20751.1 vs. uniprot
Match: L1I9E2_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I9E2_GUITC)

HSP 1 Score: 90.9 bits (224), Expect = 1.100e-21
Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 0

Query:   15 PVAVKRMTPFVRPPINPEQLPPDFLALLSLTFGVAGLMLKSTWASWASVFCCMSSLGNIKVHEADPKQIGCSVLFACMGLFMNYF 99
            P  V+  TP   PPI  E+LPPD++ALLSL FG+ GL+LK    SW +++ C+SS+ N+K  E D KQI  S++FA MGL MNYF
Sbjct:    7 PDLVRPYTP--PPPIPQEELPPDYMALLSLLFGLLGLLLKYKICSWLALYACLSSVANVKKSEVDLKQIASSLIFALMGLSMNYF 89

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig918.20751.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig918.20751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A6H5JS23_9PHAE	1.870e-70	96.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FWB2_ECTSI	4.920e-70	97.20	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S2Y0W3_9STRA	1.830e-31	64.20	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
L1I9E2_GUITC	1.100e-21	52.94	Uncharacterized protein n=1 Tax=Guillardia theta (...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005351	Uncharacterised protein family UPF0139	PFAM	PF03669	UPF0139	coord: 13..102 e-value: 3.1E-24 score: 84.7
IPR005351	Uncharacterised protein family UPF0139	PANTHER	PTHR13193	CGI-140	coord: 8..103
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 101..107
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 38..71
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..37
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 72..82
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 83..100
None	No IPR available	PRODOM	PD073147		coord: 14..88 e-value: 9.0E-9 score: 137.0

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig918	contig	Ecto-sp13_S_contig918:1897..3386 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig918.20751.1	mRNA_Ecto-sp13_S_contig918.20751.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig918 795..5241 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig918.20751.1 ID=prot_Ecto-sp13_S_contig918.20751.1|Name=mRNA_Ecto-sp13_S_contig918.20751.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=108bp
MSLTTRETSTSRVDPVAVKRMTPFVRPPINPEQLPPDFLALLSLTFGVAG
LMLKSTWASWASVFCCMSSLGNIKVHEADPKQIGCSVLFACMGLFMNYFG
PASRPIV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005351	UPF0139