mRNA_Ecto-sp13_S_contig1249.2069.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1249.2069.1 vs. uniprot
Match: A0A6H5L4T2_9PHAE (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4T2_9PHAE) HSP 1 Score: 565 bits (1456), Expect = 4.710e-199 Identity = 281/317 (88.64%), Postives = 292/317 (92.11%), Query Frame = 1
Query: 118 ILCKRQIMTRLMYYLLPLALCRRTVVRGFGLLPPLLSSQCRGDVARPHSQTSRSSCRPMDRVMMTGAFWEGIVQGVGMKTTTSPTAKEKCPVLICPAQLSVPGDYGQMVTGLKERGFPAYCADLTRFGWITGLLPSALSPEYFKGELTPANTLKFYYEAIDRALEEIKERHPGQGMHVVGHSIGGWVARAWLAEGCADADRENVLSLTTLGTPNTGPPEDAGLWTAVDQTRGLLKNINARFPGAHVEGVQYTSVAGTALEGKFPGSVEEMLAFISYLPLCGDGGSRGDGIIPLDVAVLKGSTIVELPSSKHSGEFFP 1068
+LC RQ+MTRLMY+LL LALCRR VVRGFGLLPPLL SQ RG V T RSSCRP DRV+MTGAFWEGIVQGVGMKT T PTAKEK PVLICPAQLSVPGDY QMVT LK+RGFPAYCADLTRFGWITGLLPSALSPEY KGELTPANTLKFYYEAIDRALEEIKERHPGQGMHV+GHSIGGWVARAWLAEGCADADRENVLSLTTLGTPNTGPPEDAGLW AVDQTRGLLK INARFPGAHVEGV+YTSVAGTALEGK PGSVEEMLA++SYLPLCGDGGSRGDGIIPLDVAVL+GST+VELPSSKHSG F P
Sbjct: 1 MLCNRQVMTRLMYHLLILALCRRIVVRGFGLLPPLLLSQSRGGV------TPRSSCRPRDRVIMTGAFWEGIVQGVGMKTPTPPTAKEKGPVLICPAQLSVPGDYRQMVTELKKRGFPAYCADLTRFGWITGLLPSALSPEYVKGELTPANTLKFYYEAIDRALEEIKERHPGQGMHVIGHSIGGWVARAWLAEGCADADRENVLSLTTLGTPNTGPPEDAGLWAAVDQTRGLLKYINARFPGAHVEGVRYTSVAGTALEGKLPGSVEEMLAYVSYLPLCGDGGSRGDGIIPLDVAVLEGSTVVELPSSKHSG-FIP 310
BLAST of mRNA_Ecto-sp13_S_contig1249.2069.1 vs. uniprot
Match: A0A835ZI81_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI81_9STRA) HSP 1 Score: 245 bits (626), Expect = 1.260e-74 Identity = 127/224 (56.70%), Postives = 149/224 (66.52%), Query Frame = 1
Query: 412 LSVPGDYGQMVTGLKERGFPAYCADLTRFGWITGLLPSALSPEYFKGELTPANTLKFYYEAIDRALEEIKERHPGQGMHVVGHSIGGWVARAWLAEGCADADRENVLSLTTLGTPNTGPPEDAGLWTAVDQTRGLLKNINARFPGAHVEGVQYTSVAGTALEGKFPG-SVEEMLAFISYLPLCGDGGSRGDGIIPLDVAVLKGSTIVELPSSKHSGEFFPHLSR 1080
LS+P DY M+ RG Y A L R GWI GLLPSAL+ +YFKG L P+ TLKFYY+AID+ LE +K +HP + H+VGHSIGGWVAR WL+E + ADR VLSLTTLGTPN PP D+ L VDQTRGLLK IN FP V GV+YTSV GT +FP V+EMLA ISYLPL G GDGI+P ++ GS + LP +KHSG F P R
Sbjct: 19 LSIPEDYADMIDVFNARGHQVYGAQLQRVGWILGLLPSALTLDYFKGTLQPSKTLKFYYDAIDKGLESLKAQHPDEPFHLVGHSIGGWVARGWLSERASAADRARVLSLTTLGTPNREPPPDSPL-AKVDQTRGLLKFINENFPAGSVPGVKYTSVVGTGTLARFPSLDVQEMLAAISYLPLGGAPDGLGDGIVPWRAGIMDGSESIILPDAKHSG-FVPTAGR 240
BLAST of mRNA_Ecto-sp13_S_contig1249.2069.1 vs. uniprot
Match: A0A7S3YIH2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIH2_HETAK) HSP 1 Score: 236 bits (601), Expect = 3.830e-70 Identity = 114/263 (43.35%), Postives = 169/263 (64.26%), Query Frame = 1
Query: 271 SRSSCRPMDRVMMTGAFWEGIVQGVGMKTTTSP-TAKEKCPVLICPAQLSVPGDYGQMVTGLKERGFPAYCADLTRFGWITGLLPSALSPEYFKGELTPANTLKFYYEAIDRALEEIKERHPGQGMHVVGHSIGGWVARAWLAEGCADADRENVLSLTTLGTPNTGPPEDAGLWTAVDQTRGLLKNINARFPGAHVEGVQYTSVAGTALEGKFPGSVEEMLAFISYLPLCGDGGSRGDGIIPLDVAVLKGSTIVELPSSKHSG 1056
+ S+ R + ++ A W G+ + K P T +K PVLICPAQ V DY M+ L+ G AY AD+ R W+ ++P+ + +Y+ G L P N L+F++E ID+ +E +K+ +PG+ ++++GHSIGGW+ R++L E C A+RE SLT LG+P PPE +W A DQTRGLL+++NA FPGA G++YT+VAG EG G ++ +A+ SYLPLCGDG RGDGI+P++ A+L+G+ + L KH+G
Sbjct: 59 NHSNKRKEELYQLSMASW-GVFENFKPKQVEEPPTRVKKKPVLICPAQFCVAEDYADMIEILENMGHKAYVADIGRSDWLK-IVPATFTIDYWTGNLKPKNCLQFFFEGIDKTMERVKKENPGEQVNIIGHSIGGWIVRSYLGEVCTSAEREAFCSLTLLGSPQQTPPEGT-VWAAADQTRGLLRHVNANFPGAFHPGLRYTAVAGAGQEGSLAGGLQAAVAYSSYLPLCGDGNCRGDGIVPVETALLEGAEALVLEGVKHAG 318
BLAST of mRNA_Ecto-sp13_S_contig1249.2069.1 vs. uniprot
Match: W7TPL2_9STRA (AB hydrolase-1 domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPL2_9STRA) HSP 1 Score: 233 bits (595), Expect = 1.180e-69 Identity = 119/250 (47.60%), Postives = 164/250 (65.60%), Query Frame = 1
Query: 331 IVQGVGMKTTTSPTAKEKCPVLICPAQLSVPGDYGQMVTGLKERGFPAYCADLTRFGWITGLLPSALSPEYFKGELTPANTLKFYYEAIDRALEEIKERHPGQGMHVVGHSIGGWVARAWLAEGCADADRENV----LSLTTLGTPNTGPPEDAGLWTAVDQTRGLLKNINARFPGAHVEGVQYTSVAGTALEGKFPGSVEEMLAFISYLPLCGDGGSRGDGIIPLDVAVLKGSTIVELPSSKHSGEFFP 1068
I + V + + T K P++I PAQ V DY +M+ L RG PAY DL+RF W+ + SA++ +Y++G L P+ TL FY++A +E +K +P + +H+V HSIGGWVARA+ E AD E+V +SLTTLG+PN PP G+W ++DQTRGLL+ +N RFPGA +G++Y SV G +G+F G +EE +A+ISYLPLCG G + GDGIIP VA L+GST V + +KHSG F P
Sbjct: 34 ITKAVALPASDQSTLN-KSPIVIFPAQFGVAKDYEEMIAELNSRGHPAYAVDLSRFDWLK-ITKSAITQDYWRGTLKPSGTLDFYFDAAAAIIERVKFEYPDRKIHLVAHSIGGWVARAYCGE---VADPEDVNKRFISLTTLGSPNYPPPAGEGIWGSIDQTRGLLEYVNLRFPGAFHKGMKYVSVGGVGTKGRFGGGLEESIAYISYLPLCGKGDAEGDGIIPESVAFLEGSTHVRVMEAKHSG-FIP 277
BLAST of mRNA_Ecto-sp13_S_contig1249.2069.1 vs. uniprot
Match: A0A0G4HP68_9ALVE (GPI inositol-deacylase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HP68_9ALVE) HSP 1 Score: 230 bits (587), Expect = 2.550e-68 Identity = 118/241 (48.96%), Postives = 157/241 (65.15%), Query Frame = 1
Query: 355 TTTSPTAKEKCPVLICPAQLSVPGDYGQMVTGLKERGFPAYCADLTRFGWITGLLPSALSPEYFKGELTPANTLKFYYEAIDRALEEIKERHPGQGMHVVGHSIGGWVARAWLAEGCADADRENVLSLTTLGTPNTGPPEDAGLWTAVDQTRGLLKNINARFPGAHVEGVQYTSVAGTALEGKF--PGSVEEMLAFISYLPLCGDGGSRGDGIIPLDVAVLKGSTI-VELPSSKHSGEFFP 1068
T T P A K PV++CP+Q P DYG ++ L RGFPAY ADL R W L+P + + +Y+KG L P+ L+FYY AI R ++ + E+HP Q +H+VGHSIGGWVAR +LAE + ++ + SLTTLG+PN PEDA L A+DQTRGLL +N+++PGA EGV+Y S G+ + G+ P E LAF+SY LCG GG GDGI+P VA L+G ++L KH+G F P
Sbjct: 62 TRTDPKALVKNPVILCPSQFGAPPDYGDLLQELNARGFPAYVADLGRSDWFE-LIPHSFTADYWKGTLQPSKVLRFYYRAIQRTVDLVAEQHPNQQIHLVGHSIGGWVARLFLAEEADEDTQKRIRSLTTLGSPNKALPEDAPL--AIDQTRGLLSYVNSKYPGATCEGVRYFSAGGSRVRGQVEVPPDFESALAFLSYFALCGKGGEAGDGIVPYSVAELEGGERHLDLGDVKHTG-FLP 298
BLAST of mRNA_Ecto-sp13_S_contig1249.2069.1 vs. uniprot
Match: A0A7S2UYV4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYV4_9STRA) HSP 1 Score: 224 bits (570), Expect = 7.140e-66 Identity = 112/244 (45.90%), Postives = 158/244 (64.75%), Query Frame = 1
Query: 337 QGVGMKTTTSPTAKEKCPVLICPAQLSVPGDYGQMVTGLKERGFPAYCADLTRFGWITGLLPSALSPEYFKGELTPANTLKFYYEAIDRALEEIKERHPGQGMHVVGHSIGGWVARAWLAEGCADADRENVLSLTTLGTPNTGPPEDAGLWTAVDQTRGLLKNINARFPGAHVEGVQYTSVAGTALEGKFPGSVEEMLAFISYLPLCGDGGSRGDGIIPLDVAVLKGSTIVELPSSKHSGEFFP 1068
Q GM + K P+LI PAQ SVP DY M L+ RG AY A+L+R W+ ++P+ L+ +Y++G L P L F++E +++AL +++E +PG +H VGHSIGGW+ARA+L E C +A SLTTLGTP+ GPP D+ + + +QTRGLL +N FPGA+ ++YT V G+A +G +VEE+LA+ SYLPLCG G + GDGI+PL A L + + +P +KHSG F P
Sbjct: 55 QEAGMSSAVKLAKK---PILIFPAQFSVPNDYLPMCQDLERRGHRAYVAELSRADWLR-IVPATLTADYWRGTLKPKECLGFFFEGVEKALRKVQEENPGSQIHAVGHSIGGWIARAYLGEVCDEATCNQFCSLTTLGTPHQGPPADSPM-ASFEQTRGLLSYVNTNFPGAYHGHMKYTCVCGSAQQGAIGANVEEVLAYASYLPLCGKGEAHGDGIVPLQAAFLDDAERIIIPEAKHSG-FLP 292
BLAST of mRNA_Ecto-sp13_S_contig1249.2069.1 vs. uniprot
Match: A0A0G4FAT1_VITBC (AB hydrolase-1 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FAT1_VITBC) HSP 1 Score: 218 bits (556), Expect = 2.990e-64 Identity = 114/246 (46.34%), Postives = 159/246 (64.63%), Query Frame = 1
Query: 346 GMKTTTSPTAKEKCPVLICPAQLSVPGDYGQMVTGLKERGFPAYCADLTRFGWITGLLPSALSPEYFKGELTPANTLKFYYEAIDRALEEIKERHPGQGMHVVGHSIGGWVARAWLAEGCADADRENVL-SLTTLGTPNTGPPEDAGLWTAVDQTRGLLKNINARFPGA-HVEGVQYTSVAGTALEGKF-PGSVEEMLAFISYLPLCGDGGSRGDGIIPLDVAVLKGSTIVELPSSKHSGEFFPHL 1074
G + + K PVLICPAQL + DY M++ L RG+PAY DL R W+ L+PS+L+ Y++G+L P+ L+FYY A+ R++ ++E HP Q MH+VGHSIGGW+ RA+LAE D +R ++ SLTTLGTP+ PP D+ + DQTRGLL I +PGA H + + Y SV G +++G G +E +LA+ SYL LCG+G + GDG++P A+L GS+ + L KHSG F P L
Sbjct: 12 GPSAFATAAEEPKSPVLICPAQLGISEDYLDMISELNARGYPAYAVDLKRLDWLE-LIPSSLTLAYWQGKLEPSKVLQFYYRALRRSVTSVREAHPEQRMHLVGHSIGGWIVRAFLAEEYDDDERASLFTSLTTLGTPHNPPPADSP-FAQFDQTRGLLTYIADNYPGAFHSDHINYNSVVGASVKGGLGEGGLEGLLAYASYLALCGEGDTTGDGVVPQSTALLPGSSTMVLEDVKHSG-FVPSL 254
BLAST of mRNA_Ecto-sp13_S_contig1249.2069.1 vs. uniprot
Match: A0A7S4PV97_9DINO (GPI inositol-deacylase n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PV97_9DINO) HSP 1 Score: 196 bits (498), Expect = 7.870e-53 Identity = 109/234 (46.58%), Postives = 144/234 (61.54%), Query Frame = 1
Query: 382 KCPVLICPAQLSVPGDYGQMVTGLKERGFPAYCADLTRFGWITGLLPSALSPEYFKGELTPANTLKFYYEAIDRALEEIK----ERHPGQGMHVVGHSIGGWVARAWLAEGCAD-ADRENVLSLTTLGTPNTGPPEDAGLWTAVDQTRGLLKNINARFPGA-HV-EGVQYTSVAGTALEGKFP------------GSVEEMLAFISYLPLCGDGGSRGDGIIPLDVAVLKGSTI 1026
K P+++CPAQ PGDY L+ RG P + A L + W L+PS LS EY+ GEL P L+FYY A++ A+ + + +R G +H+V HSIGGW+ARA++ E A + +V SL TLGTP+ PP+ + + TA DQTRGLLK IN+ FPGA H EGV+Y SV G A++G P G +E LA+ SYL LCGDGG+RGDGI PL A+L G +
Sbjct: 282 KDPIVVCPAQFGTPGDYTSFAAELRSRGHPVFLAPLDKLNWFE-LVPSFLSKEYWTGELRPGKVLQFYYRALEAAVADARSYLAKRGTGGQIHIVAHSIGGWIARAFMGEVLAPRGELVDVASLVTLGTPHAEPPKGSWMETA-DQTRGLLKYINSEFPGAFHAGEGVRYISVGGGAVQGGLPLPFGLGGEGAEGGPIERALAWASYLALCGDGGARGDGITPLACALLPGDGV 513
BLAST of mRNA_Ecto-sp13_S_contig1249.2069.1 vs. uniprot
Match: A0A7S2GTW5_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GTW5_9EUKA) HSP 1 Score: 189 bits (479), Expect = 1.760e-51 Identity = 99/216 (45.83%), Postives = 135/216 (62.50%), Query Frame = 1
Query: 388 PVLICPAQLSVPGDYGQMVTGLKERGFPAYCADLTRFGWITGLLPSALSPEYFKGELTPANTLKFYYEAIDRALEEIKERHPGQGMHVVGHSIGGWVARAWLAEGCADADRENVLSLTTLGTPNTGPPEDAGLWTAVDQTRGLLKNINARFPGAHVEGVQYTSVAGTALEGKFPGS-----VEEMLAFISYLPLCGDGGSRGDGIIPLDVAVLKGS 1020
PVLICPAQ GDY ++ L+ G P A LT F W L+P+ L+ EY++G+L+P L FYYEAI + EE+ + +PG+ + +V HSIGGW+ R++L + +D DR +L TLGTP+ PPE G + +DQTRGLL+ + R+PGA+ ++Y SV A+ G P S +E LA SYLPLCGD RGDGI PL A L+G+
Sbjct: 156 PVLICPAQFGTAGDYDELAEELRALGHPVMVAPLTPFEWFR-LIPATLTAEYWRGDLSPDVALPFYYEAIAKGAEELTKAYPGRKISLVAHSIGGWITRSYLGQ-LSDDDRSKFGALVTLGTPHAPPPE--GFFRTLDQTRGLLRFVEERYPGAYHPELRYMSVGSDAVAGSLPWSSNGRLLESTLALASYLPLCGDAFIRGDGITPLACAHLEGA 367
BLAST of mRNA_Ecto-sp13_S_contig1249.2069.1 vs. uniprot
Match: A0A0M0K3U1_9EUKA (Alpha beta-hydrolase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K3U1_9EUKA) HSP 1 Score: 184 bits (466), Expect = 1.510e-48 Identity = 97/219 (44.29%), Postives = 135/219 (61.64%), Query Frame = 1
Query: 367 PTAKEKCPVLICPAQLSVPGDYGQMVTGLKERGFPAYCADLTRFGWITGLLPSALSPEYFKGELTPANTLKFYYEAIDRALEEIKER-HPGQGMHVVGHSIGGWVARAWLAEGCADADRENVLSLTTLGTPNTGPPEDAGLWTAVDQTRGLLKNINARFPGAHVEGVQYTSVAGTALEGKFPGSVEEMLAFISYLPLCGDGGSRGDGIIPLDVAVLKGS 1020
P + + PVLICPAQ DY ++V L+ RG P L W+ L+P+AL+PEY+K EL P L FY+EA+DRA++E+ G+ +H+V HSIGGW+ RA+L A+ R SL TLGTP+T PPE G +DQTRGLL+ + R+PGA+ + ++Y +V A+ G + +LA SYLPLCGD + GDGI P+ A L+G+
Sbjct: 268 PESLSRDPVLICPAQFGTAKDYSELVDALRARGHPVSVTPLAFTDWLR-LVPAALTPEYWKCELAPETALPFYFEALDRAVDELASGPFAGRPIHLVAHSIGGWIVRAYLGALSAEK-RAAFASLVTLGTPHTPPPE--GFLRTIDQTRGLLRYVEERYPGAYHKELRYLTVGSRAVRGALKPELGALLATASYLPLCGDAFAEGDGITPIGCAHLEGA 482 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1249.2069.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1249.2069.1 >prot_Ecto-sp13_S_contig1249.2069.1 ID=prot_Ecto-sp13_S_contig1249.2069.1|Name=mRNA_Ecto-sp13_S_contig1249.2069.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=367bp MTRLMYYLLPLALCRRTVVRGFGLLPPLLSSQCRGDVARPHSQTSRSSCRback to top mRNA from alignment at Ecto-sp13_S_contig1249:13336..16545- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1249.2069.1 ID=mRNA_Ecto-sp13_S_contig1249.2069.1|Name=mRNA_Ecto-sp13_S_contig1249.2069.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3210bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1249:13336..16545- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1249:13336..16545- >mRNA_Ecto-sp13_S_contig1249.2069.1 ID=mRNA_Ecto-sp13_S_contig1249.2069.1|Name=mRNA_Ecto-sp13_S_contig1249.2069.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1101bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1249:13336..16545- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |