mRNA_Ecto-sp13_S_contig9023.20580.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9023.20580.1 vs. uniprot
Match: A0A6H5KQ64_9PHAE (Amine oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KQ64_9PHAE) HSP 1 Score: 125 bits (313), Expect = 6.980e-31 Identity = 56/66 (84.85%), Postives = 57/66 (86.36%), Query Frame = 3
Query: 114 RNVADEDVVLWHSFGLLHGPG*RISPFMPCESTGFTLKPDGFFSGNPTMDLAPSAGGDGKSKCCSH 311
RNV DEDVVLWHSFGLLH P P MPCESTGFTLKPDGFFSGNPT+DL PSAGGDGKSKCCSH
Sbjct: 652 RNVEDEDVVLWHSFGLLHVPRVEDFPVMPCESTGFTLKPDGFFSGNPTIDLPPSAGGDGKSKCCSH 717
BLAST of mRNA_Ecto-sp13_S_contig9023.20580.1 vs. uniprot
Match: D8LSR3_ECTSI (Amine oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSR3_ECTSI) HSP 1 Score: 102 bits (253), Expect = 9.040e-23 Identity = 46/55 (83.64%), Postives = 47/55 (85.45%), Query Frame = 3
Query: 114 RNVADEDVVLWHSFGLLHGPG*RISPFMPCESTGFTLKPDGFFSGNPTMDLAPSA 278
RNV DEDVVLWHSFGLLH P P MPCESTGFTLKPDGFFSGNPT+DLAPSA
Sbjct: 610 RNVEDEDVVLWHSFGLLHVPRVEDFPVMPCESTGFTLKPDGFFSGNPTIDLAPSA 664
BLAST of mRNA_Ecto-sp13_S_contig9023.20580.1 vs. uniprot
Match: A0A7S1DXA7_HEMAN (Amine oxidase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DXA7_HEMAN) HSP 1 Score: 83.2 bits (204), Expect = 1.590e-16 Identity = 38/66 (57.58%), Postives = 44/66 (66.67%), Query Frame = 3
Query: 114 RNVADEDVVLWHSFGLLHGPG*RISPFMPCESTGFTLKPDGFFSGNPTMDLAPSAGGDGKSKCCSH 311
R + +DVVLWH FG+ H P P MPCE TGFTLKPDGF GNP +D+ P A + SKCCSH
Sbjct: 264 RQLDGQDVVLWHCFGVAHIPRVEDFPVMPCEVTGFTLKPDGFSLGNPGIDIPPDA--NKASKCCSH 327
BLAST of mRNA_Ecto-sp13_S_contig9023.20580.1 vs. uniprot
Match: UPI0010F65052 (primary-amine oxidase n=1 Tax=Rhodococcus subtropicus TaxID=2545757 RepID=UPI0010F65052) HSP 1 Score: 84.0 bits (206), Expect = 1.980e-16 Identity = 36/64 (56.25%), Postives = 44/64 (68.75%), Query Frame = 3
Query: 114 RNVADEDVVLWHSFGLLHGPG*RISPFMPCESTGFTLKPDGFFSGNPTMDLAPSAGGDGKSKCC 305
RN+ADE +V+WH+FGL H P P MP + TGFTLKP+GFF NPT+D+ PSA D CC
Sbjct: 577 RNIADEHLVVWHTFGLTHVPRPEDWPIMPVDYTGFTLKPNGFFDRNPTLDVPPSARRDEGDSCC 640
BLAST of mRNA_Ecto-sp13_S_contig9023.20580.1 vs. uniprot
Match: A0A7S1GM92_CYCTE (Amine oxidase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GM92_CYCTE) HSP 1 Score: 82.4 bits (202), Expect = 2.890e-16 Identity = 36/66 (54.55%), Postives = 42/66 (63.64%), Query Frame = 3
Query: 114 RNVADEDVVLWHSFGLLHGPG*RISPFMPCESTGFTLKPDGFFSGNPTMDLAPSAGGDGKSK--CC 305
RN+ EDVVLWHSFG+ H P P MPCE+TGFTLKPDGF GNP +D+ P + CC
Sbjct: 255 RNIEGEDVVLWHSFGVTHVPRVEDFPVMPCETTGFTLKPDGFSMGNPAIDMPPDTNNQSELSEGCC 320
BLAST of mRNA_Ecto-sp13_S_contig9023.20580.1 vs. uniprot
Match: A0A448ZC22_9STRA (Amine oxidase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZC22_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 3.730e-16 Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 3
Query: 102 TS*RRNVADEDVVLWHSFGLLHGPG*RISPFMPCESTGFTLKPDGFFSGNPTMDLAPS 275
T RN+ ED+VLWH+FG+ H P P MPCE+TGFTLKPDGFF GNP +DL P+
Sbjct: 664 TKANRNLQGEDLVLWHAFGVAHVPRTEDFPVMPCETTGFTLKPDGFFDGNPGIDLEPT 721
BLAST of mRNA_Ecto-sp13_S_contig9023.20580.1 vs. uniprot
Match: K8EHE4_9CHLO (Amine oxidase n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EHE4_9CHLO) HSP 1 Score: 82.4 bits (202), Expect = 6.890e-16 Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 3
Query: 114 RNVADEDVVLWHSFGLLHGPG*RISPFMPCESTGFTLKPDGFFSGNPTMDLAPSAGGDGKSKCCS 308
R+++ ++V+WH+FG++H P P MP E TGF+LKPDGFF+GNPT+DL P GKS CCS
Sbjct: 621 RDISSGELVIWHAFGVVHIPRPEDFPVMPVEHTGFSLKPDGFFAGNPTIDLPPPK--SGKSTCCS 683
BLAST of mRNA_Ecto-sp13_S_contig9023.20580.1 vs. uniprot
Match: A0A830HQ12_9CHLO (Amine oxidase n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HQ12_9CHLO) HSP 1 Score: 81.6 bits (200), Expect = 1.290e-15 Identity = 38/71 (53.52%), Postives = 47/71 (66.20%), Query Frame = 3
Query: 102 TS*RRNVADEDVVLWHSFGLLHGPG*RISPFMPCESTGFTLKPDGFFSGNPTMDLAPSAGGDGK--SKCCS 308
TS R+V + DVV WH+FG++H P P MPCE+TGF LKPD FF+GNP++DL P K S CCS
Sbjct: 652 TSKNRSVENTDVVCWHAFGVMHVPRPEDFPVMPCETTGFMLKPDNFFTGNPSIDLPPVEDKMSKEESSCCS 722
BLAST of mRNA_Ecto-sp13_S_contig9023.20580.1 vs. uniprot
Match: A0A7S2XTZ3_9STRA (Amine oxidase n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTZ3_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.770e-15 Identity = 33/53 (62.26%), Postives = 40/53 (75.47%), Query Frame = 3
Query: 114 RNVADEDVVLWHSFGLLHGPG*RISPFMPCESTGFTLKPDGFFSGNPTMDLAP 272
R++ +DVVLWHSFG+ H P P MPCE+TGF LKPDGFF+GNP +DL P
Sbjct: 682 RSIESKDVVLWHSFGVTHMPRVEDFPVMPCETTGFMLKPDGFFAGNPAIDLPP 734
BLAST of mRNA_Ecto-sp13_S_contig9023.20580.1 vs. uniprot
Match: A0A2V3J6I3_9FLOR (Amine oxidase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6I3_9FLOR) HSP 1 Score: 80.9 bits (198), Expect = 2.380e-15 Identity = 37/69 (53.62%), Postives = 45/69 (65.22%), Query Frame = 3
Query: 102 TS*RRNVADEDVVLWHSFGLLHGPG*RISPFMPCESTGFTLKPDGFFSGNPTMDLAPSAGGDGKSKCCS 308
TS R++ DE +V+WHSFG+ H P P MPCESTGFTLKPD F GNP +D+ S + S CCS
Sbjct: 612 TSQNRSIVDERIVIWHSFGVAHVPRTEDFPIMPCESTGFTLKPDCFLMGNPGVDIPRSV--EKSSVCCS 678 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9023.20580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9023.20580.1 >prot_Ecto-sp13_S_contig9023.20580.1 ID=prot_Ecto-sp13_S_contig9023.20580.1|Name=mRNA_Ecto-sp13_S_contig9023.20580.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=122bp RACKRRLLVSSQNRYTRRACWVYGSAPHLLTPLPRVSEGTSRMRTWSCGTback to top mRNA from alignment at Ecto-sp13_S_contig9023:3160..3525+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9023.20580.1 ID=mRNA_Ecto-sp13_S_contig9023.20580.1|Name=mRNA_Ecto-sp13_S_contig9023.20580.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=366bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9023:3160..3525+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9023:3160..3525+ >mRNA_Ecto-sp13_S_contig9023.20580.1 ID=mRNA_Ecto-sp13_S_contig9023.20580.1|Name=mRNA_Ecto-sp13_S_contig9023.20580.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=366bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9023:3160..3525+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |