mRNA_Ecto-sp13_S_contig9015.20570.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9015.20570.1 vs. uniprot
Match: D8LN54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN54_ECTSI) HSP 1 Score: 264 bits (674), Expect = 2.390e-87 Identity = 132/161 (81.99%), Postives = 140/161 (86.96%), Query Frame = 1
Query: 1 NGNRTLSCWEKGITWWSRFWAWIYLPVSATFLGLYFPGKVNSEGTACFNSYREETEPGEVSDVAGFASNNVLLTAQYVLLLAMFIKPMLVSQGNTQSGGAVYRRVVIRNIVCTVGIACAYMITTVVVVLALLSSPSGTNKSGAVIRCVDSSSRLHCSTMPP 483
NGNRTL+CWEKGITWWSRFWAWIYLPVSATFLGL FPG+VNSEGTACFNSYREET+ EV DVAGFASNNVLLT QYVLLLAMFIKPMLVSQGNTQSGGAVYRRVVIRNIVCT+GIACAY+ITT S TNKSG V+RCV SSR+H ST+PP
Sbjct: 72 NGNRTLTCWEKGITWWSRFWAWIYLPVSATFLGLTFPGEVNSEGTACFNSYREETDTAEVGDVAGFASNNVLLTVQYVLLLAMFIKPMLVSQGNTQSGGAVYRRVVIRNIVCTIGIACAYVITTXXXXXXXXXXXSDTNKSGVVLRCVAYSSRVHYSTVPP 232
BLAST of mRNA_Ecto-sp13_S_contig9015.20570.1 vs. uniprot
Match: A0A6H5JPA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA0_9PHAE) HSP 1 Score: 239 bits (609), Expect = 1.460e-76 Identity = 122/144 (84.72%), Postives = 128/144 (88.89%), Query Frame = 1
Query: 1 NGNRTLSCWEKGITWWSRFWAWIYLPVSATFLGLYFPGKVNSEGTACFNSYREETEPGEVSDVAGFASNNVLLTAQYVLLLAMFIKPMLVSQGNTQSGGAVYRRVVIRNIVCTVGIACAYMITTVVVVLALLSSPSGTNKSGAV 432
NGNRTL+ WE GITWWSRFWAWIYLPVS T LGL FPG+VNSEGTACFNSY EETE EV DVAGFA NNVLLT QYVLLLAMFIKPMLVS GNTQSGGAVYRRVVIRNIVCT+GIACAY+ITTVVVVLALLSS T+K+ AV
Sbjct: 82 NGNRTLTSWENGITWWSRFWAWIYLPVSGTVLGLSFPGEVNSEGTACFNSYGEETETREVGDVAGFAGNNVLLTVQYVLLLAMFIKPMLVSHGNTQSGGAVYRRVVIRNIVCTIGIACAYVITTVVVVLALLSSRPDTDKAAAV 225
BLAST of mRNA_Ecto-sp13_S_contig9015.20570.1 vs. uniprot
Match: A0A6H5K6Y0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y0_9PHAE) HSP 1 Score: 140 bits (353), Expect = 1.600e-38 Identity = 66/76 (86.84%), Postives = 68/76 (89.47%), Query Frame = 1
Query: 1 NGNRTLSCWEKGITWWSRFWAWIYLPVSATFLGLYFPGKVNSEGTACFNSYREETEPGEVSDVAGFASNNVLLTAQ 228
NGNRTL+ WEKGITWWSRFWAWIYLPVSAT LGL FPG+VNSEGTACFNSY EETE EV DVAGFASNNVLLT Q
Sbjct: 78 NGNRTLTSWEKGITWWSRFWAWIYLPVSATVLGLRFPGEVNSEGTACFNSYGEETETREVGDVAGFASNNVLLTVQ 153
BLAST of mRNA_Ecto-sp13_S_contig9015.20570.1 vs. uniprot
Match: A0A6H5K249_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K249_9PHAE) HSP 1 Score: 135 bits (340), Expect = 5.460e-37 Identity = 68/141 (48.23%), Postives = 91/141 (64.54%), Query Frame = 1
Query: 1 NGNRTLSCWEKGITWWSRFWAWIYLPVSATFLGLYFPGKVNSEGTACFNSYREETEPGEVSDVAGFASNNVLLTAQYVLLLAMFIKPMLVSQGNTQSGGAVYRRVVIRNIVCTVGIACAYMITTVVVVLALLSSPSGTNKS 423
NGNR L+ WE ITWWSRF+ W+ L A FL + EGT C +E E SD GF NN +L Q+ LLLA+F+KP+++ QG+TQSGGAVYRR+V+RN+ CT+ I Y +TTV+VVL L++ G+ K+
Sbjct: 27 NGNRALAIWEACITWWSRFYGWVVLTTGAFFLAAQASSVPSLEGTFCLTLDLQEDEDVTFSDALGFVINNGILIIQFALLLAIFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIAITFTYAVTTVIVVLGFLTTAPGSIKA 167
BLAST of mRNA_Ecto-sp13_S_contig9015.20570.1 vs. uniprot
Match: A0A6H5JPA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA3_9PHAE) HSP 1 Score: 137 bits (344), Expect = 4.330e-36 Identity = 69/141 (48.94%), Postives = 91/141 (64.54%), Query Frame = 1
Query: 1 NGNRTLSCWEKGITWWSRFWAWIYLPVSATFLGLYFPGKVNSEGTACFNSYREETEPGEVSDVAGFASNNVLLTAQYVLLLAMFIKPMLVSQGNTQSGGAVYRRVVIRNIVCTVGIACAYMITTVVVVLALLSSPSGTNKS 423
NGNR L+ WE ITWWSRF+ W+ L A FL + EGT C +E E SD GF NN +L Q+ LLLAMF+KP+++ QG+TQSGGAVYRR+V+RN+ CT+ I Y +TTV+VVL L++ G+ K+
Sbjct: 128 NGNRALAIWEACITWWSRFYGWVVLTTGALFLAAQASSVPSLEGTFCLTLDLKEDEDVTFSDTLGFVINNGILIIQFALLLAMFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIAITFTYAVTTVIVVLGFLTTAPGSIKA 268
BLAST of mRNA_Ecto-sp13_S_contig9015.20570.1 vs. uniprot
Match: D7G2C9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C9_ECTSI) HSP 1 Score: 132 bits (332), Expect = 1.240e-35 Identity = 69/141 (48.94%), Postives = 90/141 (63.83%), Query Frame = 1
Query: 16 LSCWEKGITWWSRFWAWIYLPVSATFLGLYFPGKVNSEGTACFNSY--REETEPGEVSDVAGFASNNVLLTAQYVLLLAMFIKPMLVSQGNTQSGGAVYRRVVIRNIVCTVGIACAYMITTVVVVLALLSSPSGTNKSGAV 432
L+ WEK I WWSR + W+YLP+ A LG FPG + GT C+N +E ++ F NNVLL Q++LLL +F++PMLV QSGGAVYRRVV+RN+ CT GI +Y ITT+VVV+ALL +NKS +
Sbjct: 2 LAWWEKAIRWWSRLYGWVYLPLMALMLGTRFPGGTDPAGTFCYNGIVPTGASELTTSNNAQSFGINNVLLVVQFILLLGLFVQPMLVRVEGAQSGGAVYRRVVLRNVFCTAGIVISYAITTLVVVIALLRESVESNKSAQI 142
BLAST of mRNA_Ecto-sp13_S_contig9015.20570.1 vs. uniprot
Match: D8LG97_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG97_ECTSI) HSP 1 Score: 134 bits (337), Expect = 2.580e-35 Identity = 70/136 (51.47%), Postives = 93/136 (68.38%), Query Frame = 1
Query: 1 NGNRTLSCWEKGITWWSRFWAWIYLPVSATFLGLYFPGKVNSEGTACFNSYREETEPG---EVSDVA-GFASNNVLLTAQYVLLLAMFIKPMLVSQGNTQSGGAVYRRVVIRNIVCTVGIACAYMITTVVVVLALL 396
NG R LSCWEKG+ W R +AWIYLP+++ F+ +PG N EGT C N ++ + + E SD A G+A N +L QYVLLL +F++P++V QSGGAVYR VVIRNI CTV + +Y+ITT+V V+ALL
Sbjct: 161 NGIRKLSCWEKGVIWICRAFAWIYLPLASIFVSATYPGGTNEEGTFCENGFKRDEDVNYEREASDNAYGYAVTNAMLLVQYVLLLILFVRPLMVRLEGAQSGGAVYRSVVIRNISCTVAVVVSYIITTIVTVIALL 296
BLAST of mRNA_Ecto-sp13_S_contig9015.20570.1 vs. uniprot
Match: A0A6H5JQ65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ65_9PHAE) HSP 1 Score: 127 bits (318), Expect = 4.170e-33 Identity = 66/136 (48.53%), Postives = 91/136 (66.91%), Query Frame = 1
Query: 1 NGNRTLSCWEKGITWWSRFWAWIYLPVSATFLGLYFPGKVNSEGTACFNSYREETEPG---EVSDVA-GFASNNVLLTAQYVLLLAMFIKPMLVSQGNTQSGGAVYRRVVIRNIVCTVGIACAYMITTVVVVLALL 396
NG R LSCWEKG+ W R +AWIYLP+++ F+ +PG +GT C NS+ + + E SD A G+A N +L QYVLLL +F++P++V QSGGAVYR VV+RN+ CT + +Y+ITT+V V+ALL
Sbjct: 115 NGMRKLSCWEKGVIWICRAFAWIYLPLASIFVSATYPGANIYQGTFCENSFNRDEDVNYEREASDNAFGYAVTNAMLLVQYVLLLILFVRPLMVRLEGVQSGGAVYRSVVVRNVSCTAAVVVSYIITTIVTVIALL 250
BLAST of mRNA_Ecto-sp13_S_contig9015.20570.1 vs. uniprot
Match: D8LN53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN53_ECTSI) HSP 1 Score: 122 bits (305), Expect = 1.130e-32 Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 1
Query: 193 GFASNNVLLTAQYVLLLAMFIKPMLVSQGNTQSGGAVYRRVVIRNIVCTVGIACAYMITTVVVVLALLSSPSGTNKSGAV 432
GFASNN LLT Q+VLLLAMFIKPML+ QG TQSGGAVYRRVV+RNIVCTVGIACAY+ITTVVVVLA +S+PS TNK+ +
Sbjct: 3 GFASNNALLTVQFVLLLAMFIKPMLLPQGGTQSGGAVYRRVVVRNIVCTVGIACAYVITTVVVVLAHVSTPSDTNKAAVL 82
BLAST of mRNA_Ecto-sp13_S_contig9015.20570.1 vs. uniprot
Match: D8LG96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG96_ECTSI) HSP 1 Score: 122 bits (306), Expect = 1.280e-30 Identity = 65/140 (46.43%), Postives = 89/140 (63.57%), Query Frame = 1
Query: 1 NGNRTLSCWEKGITWWSRFWAWIYLPVSATFLGLYFPGKVNSEGTACFNSYREETEPGEVSD-VAGFASNNVLLTAQYVLLLAMFIKPMLVSQGNTQSGGAVYRRVVIRNIVCTVGIACAYMITTVVVVLALLSSPSGTN 417
NG+R L+ WE I W SR +AWIYLP+ A + F G N E T C N Y + + EV + + G+ SN L Q+VLLL +F++P+LV +QSG A+YRRVVI+NI CT+ + AY +TTVVV+ ALL + +N
Sbjct: 145 NGHRKLAWWETAIVWISRGYAWIYLPIVAVAIPYQFRGGTNDERTFCINGYNMDDDADEVHENIRGYGSNMGSLIIQFVLLLILFVRPLLVRLEGSQSGEAIYRRVVIKNITCTIAVVTAYAVTTVVVIAALLRQNNDSN 284 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9015.20570.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9015.20570.1 >prot_Ecto-sp13_S_contig9015.20570.1 ID=prot_Ecto-sp13_S_contig9015.20570.1|Name=mRNA_Ecto-sp13_S_contig9015.20570.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=162bp NGNRTLSCWEKGITWWSRFWAWIYLPVSATFLGLYFPGKVNSEGTACFNSback to top mRNA from alignment at Ecto-sp13_S_contig9015:2..1603+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9015.20570.1 ID=mRNA_Ecto-sp13_S_contig9015.20570.1|Name=mRNA_Ecto-sp13_S_contig9015.20570.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1602bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9015:2..1603+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9015:2..1603+ >mRNA_Ecto-sp13_S_contig9015.20570.1 ID=mRNA_Ecto-sp13_S_contig9015.20570.1|Name=mRNA_Ecto-sp13_S_contig9015.20570.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=486bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9015:2..1603+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |