prot_Ecto-sp13_S_contig898.20518.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig898.20518.1
Unique Nameprot_Ecto-sp13_S_contig898.20518.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length338
Homology
BLAST of mRNA_Ecto-sp13_S_contig898.20518.1 vs. uniprot
Match: D8LFP8_ECTSI (Similar to peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFP8_ECTSI)

HSP 1 Score: 409 bits (1050), Expect = 1.570e-141
Identity = 208/210 (99.05%), Postives = 209/210 (99.52%), Query Frame = 0
Query:    1 MATSALQERRKRLVNRVGRHLPCNTIQVVSDFAKVATKVVENILSNPADIKFRELRANNKIIQRAVLSCHGGREFLSLLGFEKITKNGEVVYFLAEPHVDHLTQAKGWLAERVKSCEQSEGSVGGRACADSVLTVLLTSGQTLEGGFYKHETIHDVYAFLQSSVVNGGEDLRLRTTTVPETELGEQMLPMSLADAKLLPRATLAVVKPSA 210
            MATSALQERRKRLVNRVGRHLPCNTIQVVSDFAKVATKVVENILSNPAD+KFRELRANNK IQRAVLSCHGGREFLSLLGFEKITKNGEVVYFLAEPHVDHLTQAKGWLAERVKSCEQSEGSVGGRACADSVLTVLLTSGQTLEGGFYKHETIHDVYAFLQSSVVNGGEDLRLRTTTVPETELGEQMLPMSLADAKLLPRATLAVVKPSA
Sbjct:    1 MATSALQERRKRLVNRVGRHLPCNTIQVVSDFAKVATKVVENILSNPADVKFRELRANNKTIQRAVLSCHGGREFLSLLGFEKITKNGEVVYFLAEPHVDHLTQAKGWLAERVKSCEQSEGSVGGRACADSVLTVLLTSGQTLEGGFYKHETIHDVYAFLQSSVVNGGEDLRLRTTTVPETELGEQMLPMSLADAKLLPRATLAVVKPSA 210          
BLAST of mRNA_Ecto-sp13_S_contig898.20518.1 vs. uniprot
Match: A0A835ZG04_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG04_9STRA)

HSP 1 Score: 189 bits (479), Expect = 2.310e-54
Identity = 105/209 (50.24%), Postives = 137/209 (65.55%), Query Frame = 0
Query:    1 MATSALQERRKRLVNRVGRHLPCNTIQVVSDFAKVATKVVENILSNPADIKFRELRANNKIIQRAVLSCHGGREFLSLLGFEKITKNGEVVYFLAEPHVDHLTQAKGWLAERVKSC-EQSEGSV-GGRACADSVLTVLLTSGQTLEGGFYKHETIHDVYAFLQSSVVNGGEDLRLRTTTVPETELGEQMLPMSLADAKLLPRATLAVVK 207
            M TS +QE+R+RL+ RVGRH+PCN  + V  F   A+K+++NI+  P + K+RELRA N  +   +L  HGG+EFL LLGFEKI K+GE VYF+ E  +++LTQAK WL ++  +    +   V G +ACA+ V+ V LTSGQTLEGGFY HET+  VY F++SSVVN  E L LR             L M+L DA L PRA L VVK
Sbjct:    1 MVTSDVQEKRRRLLVRVGRHIPCNAPEAVRVFLDAASKMLDNIMKAPEEPKYRELRAANAAVSAKLLQPHGGKEFLHLLGFEKIFKHGEAVYFMTEVDLEYLTQAKQWLQQQAAAAMAMAPAEVPGAQACAECVIQVRLTSGQTLEGGFYAHETVRAVYDFVRSSVVNAEEALLLRAPG--HHSFTADKLDMTLQDAGLAPRAVLQVVK 207          
BLAST of mRNA_Ecto-sp13_S_contig898.20518.1 vs. uniprot
Match: A0A6U3RNQ7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3RNQ7_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.230e-19
Identity = 81/294 (27.55%), Postives = 131/294 (44.56%), Query Frame = 0
Query:   12 RLVNRVGRHLPCNTIQVVSDFAKVATKVVENILSNPADIKFRELRANNKIIQRAVLSCHGGREFLSLLGFEKITKNGEVVYFLAEPHVDHLTQAKGWLAERVKSCEQSEGSVGGRACADSVLTVLLTSGQTLEGGFYKHETIHDVYAFLQSSVVN---------GGEDLRLRTTTVPETELGE----QMLPMSLADAKLLPRATLAVVK-PSAXXXXXXXXXXXXXXXXXEQLRLLQENSARKNRDVIAEKEKEEAMAKFRADRVARAAAPQNGDSGVEGDRTILEACSIDVVQ 291
            ++  +  R +P N+   +     +  K+++NIL+ P+  KFR LR  NK+++  +   HG +E ++LLGFE     G +V    E  +  L + + WL E+  +    + +   +ACA+S++ V L  G T    FY  E +  V+ +L+S +++         G  D       + E   GE    + L +SL D  L+PRATL VV  PS                  E  RL +E   R+ R +  E++++E       +RV    A    D       T   A SI  VQ
Sbjct:   12 KITEKCARAIPLNSPSELRQMQTILIKIIDNILNEPSQPKFRSLRLGNKVLRTKLFERHGAKEAITLLGFENQVVEGSLV-LPPEADLGTLNETRAWLEEQFVAALSMQRTTA-QACAESIIQVRLPKGITHRCAFYAQEPLGAVHKYLESCILHQSPDQLADSGENDGGRSAWRLMEHGRGEPFSAESLQISLQDLGLVPRATLVVVMDPSLSSSEPAETAGSTAEGAREARRLREETERRRQRAMKLERQRKEVERAAERERVLSDFAADRDDRRARKTVTNQSADSITGVQ 303          
BLAST of mRNA_Ecto-sp13_S_contig898.20518.1 vs. uniprot
Match: A0A7S3UVJ1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVJ1_HETAK)

HSP 1 Score: 74.3 bits (181), Expect = 4.190e-12
Identity = 37/97 (38.14%), Postives = 58/97 (59.79%), Query Frame = 0
Query:   19 RHLPCNTIQVVSDFAKVATKVVENILSNPADIKFRELRANNKIIQRAVLSCHGGREFLSLLGFEKITKNGEVVYFLAEPHVD--HLTQAKGWLAERV 113
            R LPCN++  +  F +++ K++EN++  P++ K+R LR NN  I   ++S HGG EFL LLGF+KI + G  +  + +   D   L   K WL + V
Sbjct:   17 RKLPCNSVLELRMFLQISNKIIENLVQFPSEHKYRTLRWNNTAIHSRIISVHGGLEFLDLLGFKKIKREGVQILEINDCTDDSGRLLALKQWLRDAV 113          
BLAST of mRNA_Ecto-sp13_S_contig898.20518.1 vs. uniprot
Match: A0A6P7FTI1_DIAVI (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase n=1 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7FTI1_DIAVI)

HSP 1 Score: 61.2 bits (147), Expect = 1.140e-6
Identity = 28/85 (32.94%), Postives = 50/85 (58.82%), Query Frame = 0
Query:   19 RHLPCNTIQVVSDFAKVATKVVENILSNPADIKFRELRANNKIIQRAVLSCHGGREFLSLLGFEKITKNGEVVYFLAEPHVDHLT 103
            + L  N+  V  +  ++ TK+ +NI+ NP+D+K R L+ +N  I   +LS  GG+E L L+GFE+++    +  +LA+  +   T
Sbjct:    8 KQLEQNSPAVYQEAIRILTKIADNIIKNPSDLKVRTLQKSNITISSKILSIKGGKECLKLMGFEEVSNYSNISIYLAQTPILQTT 92          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig898.20518.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LFP8_ECTSI1.570e-14199.05Similar to peptide-N(4)-(N-acetyl-beta-glucosaminy... [more]
A0A835ZG04_9STRA2.310e-5450.24UBX domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6U3RNQ7_9STRA2.230e-1927.55Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3UVJ1_HETAK4.190e-1238.14Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6P7FTI1_DIAVI1.140e-632.94Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagin... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 216..243
NoneNo IPR availableGENE3D1.20.58.2190coord: 15..112
e-value: 6.8E-17
score: 62.9
NoneNo IPR availableGENE3D3.10.20.90coord: 128..208
e-value: 4.3E-10
score: 41.5
NoneNo IPR availablePANTHERPTHR23153UBX-RELATEDcoord: 35..107
IPR018997PUB domainSMARTSM00580PGNneucoord: 33..96
e-value: 2.7E-5
score: 33.6
IPR018997PUB domainPFAMPF09409PUBcoord: 30..104
e-value: 1.1E-15
score: 57.3
IPR001012UBX domainPFAMPF00789UBXcoord: 132..205
e-value: 8.3E-7
score: 29.1
IPR001012UBX domainPROSITEPS50033UBXcoord: 126..205
score: 9.152
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 11..115
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 131..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig898contigEcto-sp13_S_contig898:1208..9486 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig898.20518.1mRNA_Ecto-sp13_S_contig898.20518.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig898 1208..9726 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig898.20518.1 ID=prot_Ecto-sp13_S_contig898.20518.1|Name=mRNA_Ecto-sp13_S_contig898.20518.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=338bp
MATSALQERRKRLVNRVGRHLPCNTIQVVSDFAKVATKVVENILSNPADI
KFRELRANNKIIQRAVLSCHGGREFLSLLGFEKITKNGEVVYFLAEPHVD
HLTQAKGWLAERVKSCEQSEGSVGGRACADSVLTVLLTSGQTLEGGFYKH
ETIHDVYAFLQSSVVNGGEDLRLRTTTVPETELGEQMLPMSLADAKLLPR
ATLAVVKPSAAPPPPKKSRRNESEEAAEQLRLLQENSARKNRDVIAEKEK
EEAMAKFRADRVARAAAPQNGDSGVEGDRTILEACSIDVVQGWQKLMWSL
SFCVAVPWKSVAPHWLFPRRIRLSSTTQGSALQRYAT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018997PUB_domain
IPR001012UBX_dom
IPR036339PUB-like_dom_sf
IPR029071Ubiquitin-like_domsf