prot_Ecto-sp13_S_contig12473.2050.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12473.2050.1
Unique Nameprot_Ecto-sp13_S_contig12473.2050.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length268
Homology
BLAST of mRNA_Ecto-sp13_S_contig12473.2050.1 vs. uniprot
Match: D7G0B7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B7_ECTSI)

HSP 1 Score: 394 bits (1013), Expect = 3.530e-130
Identity = 217/266 (81.58%), Postives = 228/266 (85.71%), Query Frame = 0
Query:    1 EAVIPTSGPALSVAXXXXXXAGSRGLPGTQGPTSTPTSASPPPALAISGGTPSPTLEPIDFPDVVHAPSSSPEIAASSPTCGDTESFQIISSELPGVQGCFQATSTLFSTPESTEEYWTLTGEAEYESILVGAYLDEDTEEEGDSSPWYLIFISEDDDATVIYCNSNEQGILVHPADATWQCDLDGTGEYSDVTDEEVSFTCGCTGTPAXXXASSAIAAPESPTGTSPPIEPESGDGSMLGRRLSTSALVAGATSVLAIALALAVG 266
            EAV PTS P  SVA      A S+GLP TQGPTSTPTSA       ISGGTPSPTLEPIDFPDVVHAPSS PEIA SSPTCGDTESFQIISSELP +QGCFQATSTLFSTPESTEEYW+LTGEAE+ESILVG+ LDEDTEEEGDS+PWYLIF+SEDDDATV+YC SNEQGILVHPADATW+CDLDGTG YSDVT EEVSFTCGCTGTPA   A   IA PESP GTSPPIEPES DG +LGRRLSTSALVAGATSVLAI LAL +G
Sbjct:  477 EAVTPTSEPVPSVAPTPDPAAESQGLPPTQGPTSTPTSA-------ISGGTPSPTLEPIDFPDVVHAPSSPPEIAPSSPTCGDTESFQIISSELPDIQGCFQATSTLFSTPESTEEYWSLTGEAEFESILVGSILDEDTEEEGDSTPWYLIFLSEDDDATVLYCYSNEQGILVHPADATWRCDLDGTGVYSDVTAEEVSFTCGCTGTPAP--APGPIATPESPAGTSPPIEPESDDGGILGRRLSTSALVAGATSVLAIGLALGMG 733          
BLAST of mRNA_Ecto-sp13_S_contig12473.2050.1 vs. uniprot
Match: A0A6H5JQX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQX7_9PHAE)

HSP 1 Score: 271 bits (693), Expect = 5.020e-89
Identity = 144/176 (81.82%), Postives = 152/176 (86.36%), Query Frame = 0
Query:    6 TSGPALSVAXXXXXXAGSRGLPGTQGPTSTPTSASPPPALAISGGTPSPTLEPIDFPDVVHAPSSSPEIAASSPTCGDTESFQIISSELPGVQGCFQATSTLFSTPESTEEYWTLTGEAEYESILVGAYLDEDTEEEGDSSPWYLIFISEDDDATVIYCNSNEQGILVHPADATWQ 181
            T G   SVA      AGSRGL GTQGPTS PTS SPPPALAI GGTPSPTL+PIDFPDVVHAPSS PEIA SSPTCGDTESFQIISSELP VQGCFQATSTLFSTPESTEEYW+LTGEAE+ESILV + LD DTEEE DS+PWYL+F+S DDDATV+YC SNEQGILVHP DATWQ
Sbjct:   14 TPGTTFSVAPTPGPAAGSRGLLGTQGPTSIPTSVSPPPALAIWGGTPSPTLKPIDFPDVVHAPSS-PEIAPSSPTCGDTESFQIISSELPDVQGCFQATSTLFSTPESTEEYWSLTGEAEFESILVASILDLDTEEEDDSTPWYLVFLSADDDATVVYCYSNEQGILVHPTDATWQ 188          
BLAST of mRNA_Ecto-sp13_S_contig12473.2050.1 vs. uniprot
Match: A0A6H5JLC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLC2_9PHAE)

HSP 1 Score: 283 bits (723), Expect = 7.650e-88
Identity = 155/179 (86.59%), Postives = 163/179 (91.06%), Query Frame = 0
Query:    3 VIPTSGPALSVAXXXXXXAGSRGLPGTQGPTSTPTSASPPPALAISGGTPSPTLEPIDFPDVVHAPSSSPEIAASSPTCGDTESFQIISSELPGVQGCFQATSTLFSTPESTEEYWTLTGEAEYESILVGAYLDEDTEEEGDSSPWYLIFISEDDDATVIYCNSNEQGILVHPADATWQ 181
            V PTSGPA SVAXXXXXXAGSRGLPGTQGPTSTPTS SPPPA AISGGTPSP L  IDFPDVV APSSSPEIA SSPTCGDTESFQIISSELPGVQGCFQATSTLFSTPESTEEYW+LTGEAE+ESILV + LD DTEEE DS+PW+L+F+S DDDATV+YC SNEQGILVHP DATWQ
Sbjct:  464 VTPTSGPAPSVAXXXXXXAGSRGLPGTQGPTSTPTSVSPPPAPAISGGTPSPMLGSIDFPDVVPAPSSSPEIAPSSPTCGDTESFQIISSELPGVQGCFQATSTLFSTPESTEEYWSLTGEAEFESILVASILDLDTEEEDDSTPWFLVFLSADDDATVVYCYSNEQGILVHPTDATWQ 642          
BLAST of mRNA_Ecto-sp13_S_contig12473.2050.1 vs. uniprot
Match: A0A6H5L7T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T2_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 1.630e-33
Identity = 71/142 (50.00%), Postives = 93/142 (65.49%), Query Frame = 0
Query:   80 TCGDTESFQIISSELPGVQGCFQATSTLFSTPESTEEYWTLTGEAEYESILVGAYLDEDTEEEGDS-SPWYLIFISEDDDATVIYCNSNEQGILVHPADATWQCDLDGTGEYSDVTDEEVSFTCGCTGTPAXXXASSAIAAP 220
            +CGD ESF+I S  LP V+GC+Q T   F   +  EEY T++G + +E I +        +++GD   P+YL F+SE+DD T++YC SNE  + VHP DATW CDL GTG + DVTDEE+S  CGCTGTPA   A S +A P
Sbjct:  442 SCGDGESFRITSDVLPVVEGCYQQTDWSFDEGDEYEEY-TVSGMSGWEHIAILGMSSAFADDDGDVIMPFYLAFVSEEDDGTIVYCVSNEDAVTVHPVDATWTCDLGGTGTFEDVTDEEISMDCGCTGTPAPVVADSPVAPP 582          
BLAST of mRNA_Ecto-sp13_S_contig12473.2050.1 vs. uniprot
Match: A0A6H5JQR0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQR0_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 7.260e-29
Identity = 66/84 (78.57%), Postives = 69/84 (82.14%), Query Frame = 0
Query:  183 DLDGTGEYSDVTDEEVSFTCGCTGTPAXXXASSAIAAPESPTGTSPPIEPESGDGSMLGRRLSTSALVAGATSVLAIALALAVG 266
            DLDGTGEYSDVT EEVSFTCGCTGTPA      A+     PTGTSPPIEPES DG +LGRRLSTSALVAGATSVLAIALAL +G
Sbjct:   20 DLDGTGEYSDVTAEEVSFTCGCTGTPAPAPDPIAV-----PTGTSPPIEPESDDGGLLGRRLSTSALVAGATSVLAIALALGMG 98          
BLAST of mRNA_Ecto-sp13_S_contig12473.2050.1 vs. uniprot
Match: A0A6H5J9N6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9N6_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 4.890e-7
Identity = 48/166 (28.92%), Postives = 72/166 (43.37%), Query Frame = 0
Query:   81 CGDTESFQIISSELPGVQGCFQAT-------STLFSTPESTEEYWTLTGEAEYESILVGAYLDEDTEEEGDSSPWYL--IFISEDDDATVIYCNSNEQGILVHPADATWQCDLDGTGEYSDVTDEEVSFTCGCTGTPAXXXASSAIAAPESPTGTSPPIEPESGDG 237
            C D +SF + S  +P  +GC+ +          ++ST +ST              +    Y    T++   +  W +  + +   D  T+   +       +HPA A+WQCD+DG+GE   V D+E    CGC GT A   +SS  A P      SP   P S DG
Sbjct:  120 CSDGDSFTVTSPSIPSTEGCYTSVPGTSFGEGFMYSTEDST--------------VTTTIYPKIITKDGTSNFFWAVSELAVFSGDSVTIDCLSVETTSTYIHPAAASWQCDVDGSGELLPVEDDEFFLVCGC-GTSATSGSSSDGADPVQTPTASPVSNPSSVDG 270          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12473.2050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G0B7_ECTSI3.530e-13081.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQX7_9PHAE5.020e-8981.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLC2_9PHAE7.650e-8886.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7T2_9PHAE1.630e-3350.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQR0_9PHAE7.260e-2978.57Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9N6_9PHAE4.890e-728.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 267..267
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..247
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 248..266
NoneNo IPR availableTMHMMTMhelixcoord: 244..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12473contigEcto-sp13_S_contig12473:1..4199 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12473.2050.1mRNA_Ecto-sp13_S_contig12473.2050.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12473 1..4199 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12473.2050.1 ID=prot_Ecto-sp13_S_contig12473.2050.1|Name=mRNA_Ecto-sp13_S_contig12473.2050.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=268bp
EAVIPTSGPALSVAPTPGPAAGSRGLPGTQGPTSTPTSASPPPALAISGG
TPSPTLEPIDFPDVVHAPSSSPEIAASSPTCGDTESFQIISSELPGVQGC
FQATSTLFSTPESTEEYWTLTGEAEYESILVGAYLDEDTEEEGDSSPWYL
IFISEDDDATVIYCNSNEQGILVHPADATWQCDLDGTGEYSDVTDEEVSF
TCGCTGTPAPAPASSAIAAPESPTGTSPPIEPESGDGSMLGRRLSTSALV
AGATSVLAIALALAVGG*
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