mRNA_Ecto-sp13_S_contig1247.2047.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1247.2047.1 vs. uniprot
Match: D8LDN4_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDN4_ECTSI) HSP 1 Score: 638 bits (1646), Expect = 7.290e-214 Identity = 365/410 (89.02%), Postives = 372/410 (90.73%), Query Frame = 2
Query: 281 LPPTHASLSGGATPSAAASGPAQASGGEEVSKHIKTPHRR-QQQPQQQVSMRVGEVMSVPLAGKSVPFRVVKRRSKGFNSVVFECCEEQEEVMGDEADRPPRVVTVKVLSGGESGMGACLQEVETLAFLKVKRQEAGLTHERSRFAELASWFYRRSAVGGVDHVCLVFRGGGLSLREAMSARSPPIGTAQGGLTASNMPSSAPALLAWKAHEVVEVARGLLEGIAFLHSVGLVHADIKPDNVALYPXXXXXXXXXXXXXXXXXXXAAAQAPFDLRLIDLGNAVFASDTVPGVTAGTPSYLSPEASGGLAWGPPVDVWAVGCVLHEILTGGRVGAAAGFTIGNEGRGGGRRGGCGASGPSAGLXXXXXXXXXSGPELTGVVGLVKRLLAENVGVRPSAEEALRDEVFSAQP 1507
LPPTH + S GA P+A ASGPAQ SGGEEV+KH+KTPHRR QQQPQQQVSM VGEVMSVPLAGKSVPFRVVKRRSKGFNSVVFEC EEQEE MGDEA RP RVVTVKVLSGGESGMGACL EVETLAFLKVKRQEAGLT ERSRFAELASWFYRRSAVGGVDHVCLVFRGGGLSLREAMSARSPPI TAQ G+TASNMPSSAP LLAWKAHEVVEVARGLLEGIAFLHSVGLVHADIKPDNVALYPXXXXXXXXXXXXXXXXXXX AQAPFDLRLIDLGNAVFASDTVPGVTAGTPSYLSPEASGGLAWGPPVDVWAVGCVLHEILTGGRVGAAA FTIGNEGRGG GC SGPSAGL SGPELTGVVGLVKRLLAE+VGVRPSAEEAL+D VFS P
Sbjct: 33 LPPTHVARSAGAAPTAGASGPAQVSGGEEVAKHVKTPHRRRQQQPQQQVSMNVGEVMSVPLAGKSVPFRVVKRRSKGFNSVVFECREEQEEAMGDEAYRPLRVVTVKVLSGGESGMGACLHEVETLAFLKVKRQEAGLTRERSRFAELASWFYRRSAVGGVDHVCLVFRGGGLSLREAMSARSPPISTAQSGVTASNMPSSAPVLLAWKAHEVVEVARGLLEGIAFLHSVGLVHADIKPDNVALYPXXXXXXXXXXXXXXXXXXXXXAQAPFDLRLIDLGNAVFASDTVPGVTAGTPSYLSPEASGGLAWGPPVDVWAVGCVLHEILTGGRVGAAAAFTIGNEGRGG-DSSGCATSGPSAGLSASAGLSAGSGPELTGVVGLVKRLLAEDVGVRPSAEEALKDVVFSTWP 441
BLAST of mRNA_Ecto-sp13_S_contig1247.2047.1 vs. uniprot
Match: A0A7S3UQ19_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UQ19_HETAK) HSP 1 Score: 89.4 bits (220), Expect = 5.500e-15 Identity = 75/259 (28.96%), Postives = 114/259 (44.02%), Query Frame = 2
Query: 581 RVVTVKVLSGGESGMGACLQEVETLAFLKVKRQEAGLTHERSR-----FAELASWFYRRSAVGGVDHVCLVFRGGGLSLREAMSARSPPIGTAQGGLTASNMPSSAPALLAWKAHEVVEVARGLLEGIAFLHSVGLVHADIKPDNVALYPXXXXXXXXXXXXXXXXXXXAAAQAPFDLRLIDLGNAVFASDT-----------------VPGVTAGTPSYLSPEASGGLAWGPPVDVWAVGCVLHEILTGGRVGAAAGF 1291
R VT+KV G+ L+EVE L +L +K AG ++ FA L +W R ++ + LVF GGG+SLR+ + ++S + +A EV+E+ L+ G+ F H++GL+H DIKP+N+ L P A F ++ ID G+A F + T V + T SY +PE + W +DVW++GCV+ E L G +V A G
Sbjct: 17 RPVTIKVYEVGDRWKSLGLKEVEILTYLHLK---AGYKNDEDGKNSLFFAPLVAW--REDPT--LNTLFLVFPGGGVSLRDFLESQSEHL----------------------QAEEVLELFHCLVLGLDFFHNLGLIHTDIKPENIILTPAAAAVPARATQQQSLNLVTLRG-ALFRVQYIDFGSATFENATLNPENTNSCDEAMPTPPVHNMLVSTRSYRAPEVNENKCWSYGIDVWSLGCVVFETLFGQKVSAEQGL 245
BLAST of mRNA_Ecto-sp13_S_contig1247.2047.1 vs. uniprot
Match: A0A0C9QTD5_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_10703_1459 transcribed RNA sequence n=1 Tax=Wollemia nobilis TaxID=56998 RepID=A0A0C9QTD5_9SPER) HSP 1 Score: 87.4 bits (215), Expect = 4.050e-14 Identity = 67/263 (25.48%), Postives = 112/263 (42.59%), Query Frame = 2
Query: 479 FRVVKRRSKGFNSVVFECCEEQEEVMGDEADRPPRVVTVKVLSGGESGMGACLQEVETLAFLKVKRQEAGLTHER-SRFAELASWFYRRSAVGGVDHVCLVFRGGGLSLREAMSARSPPIGTAQGGLTASNMPSSAPALLAWKAHEVVEVARGLLEGIAFLHSVGLVHADIKPDNVALYPXXXXXXXXXXXXXXXXXXXAAAQAPFDLRLIDLGNAVFASDTVPGVTAGTPSYLSPEASGGLAWGPPVDVWAVGCVLHEILTG 1264
++++ + +G V EC + Q +V +K++ G E A + E++ L E G +R +R ++ +WF R +H+C+VF GLSL + + S + V E+ R LLE +A++HS+ L+H D+KP+NV +A ++LID G+ F + + + T Y +PE GL W P D+W+VGC+L E+ TG
Sbjct: 95 YKILSKMGEGTFGQVVECWDRQSR----------ELVAIKIVRGLEKYRDAAMIEIDVLC-------EVGRNDKRGNRCVQMRNWFDYR------NHICIVFEKLGLSLYDFLRKNS---------------------YCPFPIDLVREIGRQLLESVAYMHSLQLIHTDLKPENVLFVSLEHVKWSLQNREGLKLPKTSA------VKLIDFGSTTFENQNHSSIVS-TRHYRAPEVILGLGWSYPCDIWSVGCILVELCTG 306
BLAST of mRNA_Ecto-sp13_S_contig1247.2047.1 vs. uniprot
Match: A0A4Y7KIK6_PAPSO (Protein kinase domain-containing protein n=9 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7KIK6_PAPSO) HSP 1 Score: 85.1 bits (209), Expect = 1.800e-13 Identity = 67/262 (25.57%), Postives = 112/262 (42.75%), Query Frame = 2
Query: 479 FRVVKRRSKGFNSVVFECCEEQEEVMGDEADRPPRVVTVKVLSGGESGMGACLQEVETLAFLKVKRQEAGLTHERSRFAELASWFYRRSAVGGVDHVCLVFRGGGLSLREAMSARSPPIGTAQGGLTASNMPSSAPALLAWKAHEVVEVARGLLEGIAFLHSVGLVHADIKPDNVALYPXXXXXXXXXXXXXXXXXXXAAAQAPFDLRLIDLGNAVFASDTVPGVTAGTPSYLSPEASGGLAWGPPVDVWAVGCVLHEILTG 1264
+ ++ + +G V EC + +E+ R+V +KV+ A + E++ L L + E G RSR ++ +WF R +H+C+VF G SL + + N S P L V E R LLE +A++H + ++H D+KP+N+ L ++LID G+ VF + + + T Y +PE GL W P D+W++GC+L E+ +G
Sbjct: 63 YNIISKMGEGTFGRVLECWDREEK----------RMVAIKVVRSIRKYRDAAMIEIDVLQLLA--KHELG----RSRCVQIRNWFDYR------NHICIVFEKLGPSLFDFLRR---------------NKYCSLPVDL------VREFGRQLLESVAYMHDLHMIHTDLKPENILLVSSESVKLPSSKRNSRGEIQFRCLPKSSSIKLIDFGSTVFDNKEHTSIVS-TRHYRAPEVILGLGWSFPCDLWSIGCILVELCSG 280
BLAST of mRNA_Ecto-sp13_S_contig1247.2047.1 vs. uniprot
Match: A0A351FIQ6_9BACT (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A351FIQ6_9BACT) HSP 1 Score: 82.8 bits (203), Expect = 6.160e-13 Identity = 67/230 (29.13%), Postives = 96/230 (41.74%), Query Frame = 2
Query: 581 RVVTVKVLSGGESGMGACLQEVETLAFLKVKRQEAGLTHERSRFAELASWFYRRSAVGGVDHVCLVFRGGGLSLREAMSARSPPIGTAQGGLTASNMPSSAPALLAWKAHEVVEVARGLLEGIAFLHSVGLVHADIKPDNVALYPXXXXXXXXXXXXXXXXXXXAAAQAPFD--LRLIDLGNAVFASDTVPGVTAGTPSYLSPEASGGLAWGPPVDVWAVGCVLHEILTG 1264
R VK++ + A + E++ L ++ E R L +WF R H+C+VF GLSL E + + AH V R LL +AFLH++ LVH D+KP+N+ L + P D +RLID G+A F + V + T Y +PE G+ W P DVW+VGC+L E+LTG
Sbjct: 26 RYCAVKIIRNVQKYRDAAMIEIDVLKTVQKSDPEG-----RYNCIMLENWFDYRG------HICMVFEKCGLSLFEFLRKNH---------------------YKPFSAHLVQTFGRQLLHAVAFLHTLKLVHTDLKPENILLLSSAYQRVPVSSGSKF------TKRVPMDSTIRLIDFGSATFENQYHSTVVS-TRHYRAPEVILGMGWSYPCDVWSVGCILIELLTG 216
BLAST of mRNA_Ecto-sp13_S_contig1247.2047.1 vs. uniprot
Match: A0A1Y1ICC0_KLENI (Putative serine/threonine-protein kinase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ICC0_KLENI) HSP 1 Score: 83.6 bits (205), Expect = 6.640e-13 Identity = 71/262 (27.10%), Postives = 113/262 (43.13%), Query Frame = 2
Query: 479 FRVVKRRSKGFNSVVFECCEEQEEVMGDEADRPPRVVTVKVLSGGESGMGACLQEVETLAFLKVKRQEAGLTHERSRFAELASWFYRRSAVGGVDHVCLVFRGGGLSLREAMSARSPPIGTAQGGLTASNMPSSAPALLAWKAHEVVEVARGLLEGIAFLHSVGLVHADIKPDNVALYPXXXXXXXXXXXXXXXXXXXAAAQAPFDLRLIDLGNAVFASDTVPGVTAGTPSYLSPEASGGLAWGPPVDVWAVGCVLHEILTG 1264
++++ + +G V EC + DEA + V +KV+ + A + E++ L L+ K + GL R L SWF R H+C+VF G SL + + A+ V R LLE +A++H + L+H D+KP+N+ L A++ D++LID G+A F + V + T Y +PE GL W P D+W+VGC+L E++TG
Sbjct: 84 YKILSKMGEGTFGRVLECWDR------DEA----QYVAIKVIRNVQKYRDAAMIEIDVLQTLQ-KHDKGGLR----RCVALKSWFDYR------HHICMVFERLGPSLFDFLKRNQ---------------------YRAFPLDMVRAFGRQLLESVAYMHELTLIHTDLKPENILLVSSDYSKVPESKGSKYFKRVPASS----DIKLIDFGSATFDNQYHCSVVS-TRHYRAPEVILGLGWSFPCDLWSVGCILVELVTG 298
BLAST of mRNA_Ecto-sp13_S_contig1247.2047.1 vs. uniprot
Match: G7J2X1_MEDTR (Kinase AFC1 n=8 Tax=IRL clade TaxID=2233839 RepID=G7J2X1_MEDTR) HSP 1 Score: 82.0 bits (201), Expect = 1.860e-12 Identity = 66/264 (25.00%), Postives = 109/264 (41.29%), Query Frame = 2
Query: 479 FRVVKRRSKGFNSVVFECCEEQEEVMGDEADRPPR-VVTVKVLSGGESGMGACLQEVETLAFLKVKRQEAGLTHERSRFAELASWFYRRSAVGGVDHVCLVFRGGGLSLREAMSARSPPIGTAQGGLTASNMPSSAPALLAWKAHEVVEVARGLLEGIAFLHSVGLVHADIKPDNVALYPXXXXXXXXXXXXXXXXXXXAAAQAPFDLRLIDLGNAVFASDTVPGVTAGTPSYLSPEASGGLAWGPPVDVWAVGCVLHEILTGG 1267
++++ + +G V EC DR R V +KV+ + A + EV+ L ++ + + G S ++ +WF R +H+C+VF G SL + + + V E R LLE +AF+H + L+H D+KP+N+ L ++LID G+ FA+ + + + T Y +PE GL W P D+W+VGC+L E+ TGG
Sbjct: 74 YKILSKMGEGTFGRVLECW-----------DRQTRDYVAIKVIRSIKKYRDAAMIEVDVLE--RLVKSDVGC----SSCVQILNWFDYR------NHICIVFEKLGPSLFDFLKRNK---------------------YCPFPVDLVREFGRQLLESVAFMHELRLIHTDLKPENILLVSSDYVKLPSCKRVMSDETQFRCLPKSSAIKLIDFGSTAFANQSHSSIVS-TRHYRAPEVILGLGWSSPCDLWSVGCILIELCTGG 292
BLAST of mRNA_Ecto-sp13_S_contig1247.2047.1 vs. uniprot
Match: A0A0D2Q9G5_GOSRA (Protein kinase domain-containing protein n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2Q9G5_GOSRA) HSP 1 Score: 80.5 bits (197), Expect = 2.320e-12 Identity = 63/262 (24.05%), Postives = 105/262 (40.08%), Query Frame = 2
Query: 479 FRVVKRRSKGFNSVVFECCEEQEEVMGDEADRPPRVVTVKVLSGGESGMGACLQEVETLAFLKVKRQEAGLTHERSRFAELASWFYRRSAVGGVDHVCLVFRGGGLSLREAMSARSPPIGTAQGGLTASNMPSSAPALLAWKAHEVVEVARGLLEGIAFLHSVGLVHADIKPDNVALYPXXXXXXXXXXXXXXXXXXXAAAQAPFDLRLIDLGNAVFASDTVPGVTAGTPSYLSPEASGGLAWGPPVDVWAVGCVLHEILTG 1264
++++ + +G V EC + Q V +KV+ A + EV+ L L + + G +H F ++ +WF R +H+C+VF G SL + + + V E R LLE +A++H + L+H D+KP+N+ L ++LID G+ F + + + T Y +PE GL W P D+W+VGC+L E+ TG
Sbjct: 65 YKILSKMGEGTFGRVLECWDRQNR----------EYVAIKVVRSIRKYRDAAMIEVDVLEHLA--KNDKGTSH----FVQIRNWFDYR------NHICIVFERLGPSLFDFLKRNK---------------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYVKLPGCKRSSSDETHFRCLPKSSAIKLIDFGSTAFDNQNHSSIVS-TRHYRAPEIILGLGWSYPCDLWSVGCILIELCTG 282
BLAST of mRNA_Ecto-sp13_S_contig1247.2047.1 vs. uniprot
Match: A0A5P1E6X6_ASPOF (Protein kinase domain-containing protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1E6X6_ASPOF) HSP 1 Score: 82.0 bits (201), Expect = 2.340e-12 Identity = 70/270 (25.93%), Postives = 121/270 (44.81%), Query Frame = 2
Query: 479 FRVVKRRSKGFNSVVFECCEEQEEVMGDEADRPPRVVTVKVLSGGESGMGACLQEVETLAFLKVKRQEAGLTHER--SRFAELASWFYRRSAVGGVDHVCLVFRGGGLSLREAM---SARSPPIGTAQGGLTASNMPSSAPALLAWKAHEVVEVARGLLEGIAFLHSVGLVHADIKPDNVALYPXXXXXXXXXXXXXXXXXXXAAAQA---PFDLRLIDLGNAVFASDTVPGVTAGTPSYLSPEASGGLAWGPPVDVWAVGCVLHEILTG 1264
+R+ + +G V EC + + + M V +K++ G + A + EV+ L Q+ G H+R SR ++ +WF R +H+C+VF G SL + + S RS PI V E+AR LLE +AF+H + L+H D+KP+N+ L ++++ +++ID G++ +A+ + + T Y +PE GL W P D+W++GC+L E+ +G
Sbjct: 100 YRIHSKMGEGTFGQVLECWDRERKEM----------VAIKIVRGIKKYRDAAMIEVDVL-------QQLG-KHDRDGSRCVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNSYRSFPIDL------------------------VRELARQLLECVAFMHDLRLIHTDLKPENILLVSSEYIEIPDYKGSSRSSKNASSSKRLPKSSAIKVIDFGSSTYANKDHSYIVS-TRHYRAPEVILGLGWSYPCDIWSIGCILVELCSG 320
BLAST of mRNA_Ecto-sp13_S_contig1247.2047.1 vs. uniprot
Match: UPI00192225A6 (serine/threonine-protein kinase AFC2-like isoform X1 n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI00192225A6) HSP 1 Score: 81.6 bits (200), Expect = 3.070e-12 Identity = 66/264 (25.00%), Postives = 112/264 (42.42%), Query Frame = 2
Query: 479 FRVVKRRSKGFNSVVFECCEEQEEVMGDEADRPPRVVTVKVLSGGESGMGACLQEVETLAFLKVKRQEAGLTHERSRFAELASWFYRRSAVGGVDHVCLVFRGGGLSLREAMSARSPPIGTAQGGLTASNMPSSAPALLAWKAHEVVEVARGLLEGIAFLHSVGLVHADIKPDNVALYPXXXXXXXXXXXXXXXXXXXAAAQAPFD--LRLIDLGNAVFASDTVPGVTAGTPSYLSPEASGGLAWGPPVDVWAVGCVLHEILTG 1264
+++ ++ +G V EC + + + M V +KV+ + A + E+E L +L + G R +L +WF R +H+C+VF G SL + + + + V E+ R LLE +AF+H + L+H D+KP+N+ + P +++IDLG+AVF + + T Y +PE GL WG P D+W+VGC+L E+ +G
Sbjct: 97 YKIYRKVGEGTFGQVLECLDRETKEM----------VAIKVVRSIKKYREAAMMELEVLQYLGKHDRNGG------RCVQLLNWFDYR------NHICIVFEMLGPSLYDFLQKNN---------------------YRPFPVDLVRELGRQLLECVAFIHDLHLIHTDLKPENILFVSPEYVKIPDEVISCSAIRDTCHRRLPKSSAIKVIDLGSAVFEHQDHNYIVS-TRHYRAPEVILGLGWGYPCDLWSVGCILVELCSG 316 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1247.2047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1247.2047.1 >prot_Ecto-sp13_S_contig1247.2047.1 ID=prot_Ecto-sp13_S_contig1247.2047.1|Name=mRNA_Ecto-sp13_S_contig1247.2047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=488bp MIGEGQQKAPTNAVFRFTTGPTNSAQSTLSAYNAACPTQQPARQQRMQVDback to top mRNA from alignment at Ecto-sp13_S_contig1247:1956..7051+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1247.2047.1 ID=mRNA_Ecto-sp13_S_contig1247.2047.1|Name=mRNA_Ecto-sp13_S_contig1247.2047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5096bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1247:1956..7051+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1247:1956..7051+ >mRNA_Ecto-sp13_S_contig1247.2047.1 ID=mRNA_Ecto-sp13_S_contig1247.2047.1|Name=mRNA_Ecto-sp13_S_contig1247.2047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1464bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1247:1956..7051+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |