mRNA_Ecto-sp13_S_contig893.20455.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig893.20455.1 vs. uniprot
Match: D7FM37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM37_ECTSI) HSP 1 Score: 1211 bits (3134), Expect = 0.000e+0 Identity = 626/731 (85.64%), Postives = 638/731 (87.28%), Query Frame = 1
Query: 1 VNDTGAAMAEHRKDAQWGVTDFIGKFHLNRMTTPNPIPGTATRVEEERNAFLEKRASSLQKTLDNIEARRRLRVRGRTRKAAITARVEVQATVGYRIDAVQSMYRSAAGTTKKQISTAKYAPDADFHALLKYVETNNVYQVRSRLRDRSSSGSSYRLVATAEEKYGNTPLHRAVSLGFVEICSVLLEAGADLDAVNTMGDAPIHCCWRFWKGDSCKYGLWRKNPYLMTTKKMKEDFARMERDIQSTVSLLRLLTRGGADVDAQRNNGEVALHTAARRGPFMALWILLLSQATHDIIDHRHFTPETAAIRAGNEDARTLLATWPVARLKYRHSEFVQEWMKFLTDPDANLTTDLTAKEVLAQVRMEEHEESTAVRARGGHLLVDEIITGPVLSAEQRARSKILNFSASDPVTIDSTLENSTNNTNSIESCSGSSCGPSPSGTRESDEGGRRRGGEEGEKGGDKEQRQKKIKSKLGKEIDVYLAQARDEAAGVRVGGLTGQSTAYSRLVAKEQLEGRRNRWPGIRDNGKDPPTGGAGSGCSGDPFGRPMTTSQRRRAAALEIAEDGGIESPLIRTATSSALLTTRSRALKKESTPHPFYGRRLLTQRLLNQREREASIKPTATIGMNKGIDPGGRKRALYLNDARTAFNDHELLPDPNDPGGVQVEEAGRLHALHPAMQWRKLHERPFSELQGSRDHSENVYDSILENYCPRAWNAVGAQEPLLPVRRHGPYK 2193
+NDTGAAMAEHR+DAQWGVTDFIGKFHL+RMTTPN IPGTATRVE+ERN FLEKRASSLQKTLDNIEARRRLRV RSRLRDRSSSGSSYRLVATAEEKYGNTPLHRAVSLGFVEICSVLLEAGADLDAVNTMGDAPIHCCWRFWKGDSCKYGLWRKNPYLMTTKKMKEDFARMERDIQSTVSLLRLLTRGGADVDAQRNNGEVALHTAARRGPFMALWILLLSQATHDIIDHRHFTPETAAIRAGNEDA+TLLATWPVARLKYR+SEFVQEWMKFLTDPDANLTTDLTAKEVLAQVRMEEHEESTAV ARGGHLLVDEIITGPVLSAEQRAR+KILNFSASD VTI STLENSTNNTNS +SCSGS+CGPSPSGTRESDEGGRRR RQ+K KSKLGKEIDVYLAQARDEAAGVRVGGLTGQSTAYSRLVAKEQLEGRRNRWPGIRDNGKDPPTGGAGSGCSGDPFGRPMTTSQRRR AALEIAEDGGIESPLIR ATSSALLTTRSRA+KKESTPHPFYGRRLLTQRLLNQREREASIKPTATIGMNKG+DPGGRKRALYLND RTAFNDHELLPDPNDPGGV VEEAGRLHALHPAMQWRKLHERPFSELQGSRDHSENVYDSILENYCPRAWNAVGAQEPL PVR HGPYK
Sbjct: 1 MNDTGAAMAEHRRDAQWGVTDFIGKFHLSRMTTPNTIPGTATRVEQERNTFLEKRASSLQKTLDNIEARRRLRV-------------------------------------------------------------------RSRLRDRSSSGSSYRLVATAEEKYGNTPLHRAVSLGFVEICSVLLEAGADLDAVNTMGDAPIHCCWRFWKGDSCKYGLWRKNPYLMTTKKMKEDFARMERDIQSTVSLLRLLTRGGADVDAQRNNGEVALHTAARRGPFMALWILLLSQATHDIIDHRHFTPETAAIRAGNEDAKTLLATWPVARLKYRNSEFVQEWMKFLTDPDANLTTDLTAKEVLAQVRMEEHEESTAVHARGGHLLVDEIITGPVLSAEQRARAKILNFSASDAVTIASTLENSTNNTNSAKSCSGSNCGPSPSGTRESDEGGRRRXXXXXXXXXXXXXRQQKTKSKLGKEIDVYLAQARDEAAGVRVGGLTGQSTAYSRLVAKEQLEGRRNRWPGIRDNGKDPPTGGAGSGCSGDPFGRPMTTSQRRRVAALEIAEDGGIESPLIRAATSSALLTTRSRAMKKESTPHPFYGRRLLTQRLLNQREREASIKPTATIGMNKGLDPGGRKRALYLNDTRTAFNDHELLPDPNDPGGVHVEEAGRLHALHPAMQWRKLHERPFSELQGSRDHSENVYDSILENYCPRAWNAVGAQEPLFPVRGHGPYK 664
BLAST of mRNA_Ecto-sp13_S_contig893.20455.1 vs. uniprot
Match: A0A6H5L2K7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2K7_9PHAE) HSP 1 Score: 1013 bits (2619), Expect = 0.000e+0 Identity = 520/565 (92.04%), Postives = 540/565 (95.58%), Query Frame = 1
Query: 307 MYRSAAGTTKKQISTAKYAPDADFHALLKYVETNNVYQVRSRLRDRSSSGSSYRLVATAEEKYGNTPLHRAVSLGFVEICSVLLEAGADLDAVNTMGDAPIHCCWRFWKGDSCKYGLWRKNPYLMTTKKMKEDFARMERDIQSTVSLLRLLTRGGADVDAQRNNGEVALHTAARRGPFMALWILLLSQATHDIIDHRHFTPETAAIRAGNEDARTLLATWPVARLKYRHSEFVQEWMKFLTDPDANLTTDLTAKEVLAQVRMEEHEESTAVRARGGHLLVDEIITGPVLSAEQRARSKILNFSASDPVTIDSTLENSTNNTNSIESCSGSSCGPSPS--GTRESDEGGRRRGGEEGEKGGDKEQRQKKIKSKLGKEIDVYLAQARDEAAGVRVGGLTGQSTAYSRLVAKEQLEGRRNRWPGIRDNGKDPPTGGAGSGCSGDPFGRPMTTSQRRRAAALEIAEDGGIESPLIRTATSSALLTTRSRALKKESTPHPFYGRRLLTQRLLNQREREASIKPTATIGMNKGIDPGGRKRALYLNDARTAFN----DHELLPDPNDPGGV 1983
MY+SAAGTTKKQIS AKYAPDADFHALLKYVETNNVYQVRSRLRDRSS+GSSYRLVATAEEKYGNTPLHRAVSLGFVEICSVLLEAGADLDAVNTMGDAPIHCCWRFWKGDSCKYGLWRKNPYLMTTKKMKEDFARMERD+QSTVSLLRLLTRGGADVDAQRNNGEVALHTAARRGPFMALWILLLSQATHDIIDHR+FTPETAAIRAGNEDA+TLLATWPVARLKYR+SEFVQEWMKFLTDPDANLTTDLTAKEVLAQVRMEEHEESTAVRARGGHLLVDEIITGPVLSAEQRAR+K +NFSA DPVT+ STLENS NNTNS++SCSGS+CGPSPS GTRESDEGGRRRGGEEG+KGGDKEQRQ+K KSKLGKEIDVYLAQARDEAAG+RVGGLTGQSTAYSRLVAKEQLEGRRNRWPGIRDNGKDPPTGGAGSGCSGDPFGRPMTTSQRRR AALE+AEDGGIESPLIR ATSSALLTTRSRA+KKESTPHPFYGRRLLTQRLLNQREREASIKPTATIGMNKG+DPGGRKR LYLND RTA + + LL ND G
Sbjct: 1 MYQSAAGTTKKQISIAKYAPDADFHALLKYVETNNVYQVRSRLRDRSSTGSSYRLVATAEEKYGNTPLHRAVSLGFVEICSVLLEAGADLDAVNTMGDAPIHCCWRFWKGDSCKYGLWRKNPYLMTTKKMKEDFARMERDMQSTVSLLRLLTRGGADVDAQRNNGEVALHTAARRGPFMALWILLLSQATHDIIDHRNFTPETAAIRAGNEDAKTLLATWPVARLKYRNSEFVQEWMKFLTDPDANLTTDLTAKEVLAQVRMEEHEESTAVRARGGHLLVDEIITGPVLSAEQRARAKFINFSAPDPVTVASTLENSANNTNSVKSCSGSNCGPSPSPSGTRESDEGGRRRGGEEGDKGGDKEQRQQKTKSKLGKEIDVYLAQARDEAAGMRVGGLTGQSTAYSRLVAKEQLEGRRNRWPGIRDNGKDPPTGGAGSGCSGDPFGRPMTTSQRRRVAALEVAEDGGIESPLIRAATSSALLTTRSRAMKKESTPHPFYGRRLLTQRLLNQREREASIKPTATIGMNKGLDPGGRKRVLYLNDTRTALSSKAAEGSLLLMCNDRGST 565
BLAST of mRNA_Ecto-sp13_S_contig893.20455.1 vs. uniprot
Match: A0A7S4E1W1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E1W1_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 4.620e-10 Identity = 94/411 (22.87%), Postives = 147/411 (35.77%), Query Frame = 1
Query: 16 AAMAEHRKDAQWGVTDFIGKFHLNRMTTPNPIPGTATRVEEERNAFLEKRASSLQKTLDNIEARRRLRVRGRTRKAAITARVEVQATVGYRID-----------------AVQSMYRSAAGTTKKQISTAKY-APDADFH-------------ALLKYVETNNVYQVRSRLRD-----RSSSGSSYRLVATA-----------EEKYGNTPLHRAVSLGFVEICSVLLEAGADLDAVNTMGDAPIHCCWRFWKGDSCKYGLWRKNPYLMTTKKMKEDFARMER---DIQSTVSLLRLLTRGGADVDA-QRNNGEVALHTAARRGPFMALWILLLSQATHDIIDHRHFTPETAA-----------------------IRAGNEDARTLLATWPVARLKYRHSEFVQEWMKFL 1026
A + K QWG+ DF+G++H + + + P+PG+A +E R A + R ++ ++ I+AR+ V+ + R + +Q VG +D A Q R A + I K A D +F A +T + R L D R+ R++ A E L AV G + +LLE GAD + N G PI W+FW P + + D R D + TV +L +L GAD + N + L A +RGP A+ LL A + D +P T A + ++ +L +WP + + R EF W +L
Sbjct: 12 AVPEDDDKTLQWGLVDFLGRYHKHAIASDFPVPGSAVSRDELREAQYKGRIDGIRDRVNGIQARKGESVQEKVRHETFALKALIQKRVGSTLDRXXXXXXXXXXXXXXFDAEQGRSRIAKYIEEAVIEPPKPPAGDGEFDDDGELAGTTEGEIAWNVSCKTQEFLKDRKELHDWWDAVRAGDSERLRILFLAGFTRPDQWDPLEPAIQTVALELAVRRGDAAMVELLLEFGADPNKKNAGGFGPIQSSWQFW------------GPTHAADRMTQRDEGRRLSALADERRTVDMLVMLLASGADANTLSPENRKCVLMEAVKRGPVQAVCALLQYGADESLPDINRVSPLTVAQDQVSADRVNAALLGPERAKWRRVNPERKEILRILKSWPSLQKEQRDDEFFGTWDTWL 410
BLAST of mRNA_Ecto-sp13_S_contig893.20455.1 vs. uniprot
Match: A0A7S3ZJJ5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJJ5_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 5.740e-10 Identity = 94/411 (22.87%), Postives = 147/411 (35.77%), Query Frame = 1
Query: 16 AAMAEHRKDAQWGVTDFIGKFHLNRMTTPNPIPGTATRVEEERNAFLEKRASSLQKTLDNIEARRRLRVRGRTRKAAITARVEVQATVGYRID-----------------AVQSMYRSAAGTTKKQISTAKY-APDADFH-------------ALLKYVETNNVYQVRSRLRD-----RSSSGSSYRLVATA-----------EEKYGNTPLHRAVSLGFVEICSVLLEAGADLDAVNTMGDAPIHCCWRFWKGDSCKYGLWRKNPYLMTTKKMKEDFARMER---DIQSTVSLLRLLTRGGADVDA-QRNNGEVALHTAARRGPFMALWILLLSQATHDIIDHRHFTPETAA-----------------------IRAGNEDARTLLATWPVARLKYRHSEFVQEWMKFL 1026
A + K QWG+ DF+G++H + + + P+PG+A +E R A + R ++ ++ I+AR+ V+ + R + +Q VG +D A Q R A + I K A D +F A +T + R L D R+ R++ A E L AV G + +LLE GAD + N G PI W+FW P + + D R D + TV +L +L GAD + N + L A +RGP A+ LL A + D +P T A + ++ +L +WP + + R EF W +L
Sbjct: 12 AVPEDDDKTLQWGLVDFLGRYHKHAIASDFPVPGSAVSRDELREAQYKGRIDGIRDRVNGIQARKGESVQEKVRHETFALKALIQKRVGSTLDRXXXXXXXXXXXXXXFDAEQGRSRIAKYIEEAVIEPPKPPAGDGEFDDDGELAGTTEGEIAWNVSCKTQEFLKDRKELHDWWDAVRAGDSERLRILFLAGFTRPDQWDPLEPAIQTVALELAVRRGDAAMVELLLEFGADPNKKNAGGFGPIQSSWQFW------------GPTHAADRMTQRDEGRRLSALADERRTVDMLVMLLASGADANTLSPENRKCVLMEAVKRGPVQAVCALLQYGADESLPDINRVSPLTVAQDQVSADRVNAALLGPERAKWRRVNPERKEILRILKSWPSLQKEQRDDEFFGTWDTWL 410
BLAST of mRNA_Ecto-sp13_S_contig893.20455.1 vs. uniprot
Match: A0A663N2P7_ATHCN (Protein phosphatase 1 regulatory subunit 16A n=3 Tax=Strigidae TaxID=30459 RepID=A0A663N2P7_ATHCN) HSP 1 Score: 59.7 bits (143), Expect = 1.390e-5 Identity = 43/124 (34.68%), Postives = 65/124 (52.42%), Query Frame = 1
Query: 502 TPLHRAVSLGFVEICSVLLEAGADLDAVNTMGDAPIHCCWRFWKGDSCKYGLWRKNPYLMTTKKMKEDFARMERDIQSTVSLLRLLTRGGADVDAQRNNGEVALHTAARRGPFMALWILLLSQA 873
TPLH A + G + + +L+ GA+L AVN+ G+ P C D + + + +T +K++E A ERD+ V +R L + GAD+DA R +G LH AA G A +LL +A
Sbjct: 139 TPLHAAATCGHLRLVQLLIRRGANLLAVNSDGNMPYDLCEDEVTLDCIETAMAEQG---ITQEKIEEARAATERDM---VREIRQLVQAGADLDAPRGHGATLLHIAAANGYTEAAELLLEHRA 256
BLAST of mRNA_Ecto-sp13_S_contig893.20455.1 vs. uniprot
Match: A0A8C8ATE5_9STRI (Protein phosphatase 1 regulatory subunit 16A n=1 Tax=Otus sunia TaxID=257818 RepID=A0A8C8ATE5_9STRI) HSP 1 Score: 59.7 bits (143), Expect = 1.450e-5 Identity = 43/124 (34.68%), Postives = 66/124 (53.23%), Query Frame = 1
Query: 502 TPLHRAVSLGFVEICSVLLEAGADLDAVNTMGDAPIHCCWRFWKGDSCKYGLWRKNPYLMTTKKMKEDFARMERDIQSTVSLLRLLTRGGADVDAQRNNGEVALHTAARRGPFMALWILLLSQA 873
TPLH A + G + + +L++ GA+L AVN+ G+ P C D + + + +T +K++E A ERD+ V +R L + GAD+DA R +G LH AA G A +LL +A
Sbjct: 139 TPLHAAATCGHLRLVQLLIQRGANLLAVNSDGNMPYDLCEDEVTLDCIETAMAEQG---ITQEKIEEARAATERDM---VREIRQLAQAGADLDAPRAHGATLLHIAAANGYAEAAELLLEHRA 256
BLAST of mRNA_Ecto-sp13_S_contig893.20455.1 vs. uniprot
Match: A0A8D0FK82_STROC (Protein phosphatase 1 regulatory subunit 16A n=2 Tax=Strix occidentalis caurina TaxID=311401 RepID=A0A8D0FK82_STROC) HSP 1 Score: 59.3 bits (142), Expect = 1.950e-5 Identity = 43/124 (34.68%), Postives = 64/124 (51.61%), Query Frame = 1
Query: 502 TPLHRAVSLGFVEICSVLLEAGADLDAVNTMGDAPIHCCWRFWKGDSCKYGLWRKNPYLMTTKKMKEDFARMERDIQSTVSLLRLLTRGGADVDAQRNNGEVALHTAARRGPFMALWILLLSQA 873
TPLH A + G + + +L+ GADL AVN+ G+ P C D + + + +T +K++E A E D+ V +R L + GAD+DA R +G LH AA G A +LL +A
Sbjct: 139 TPLHAAATCGHLRLVQLLVRRGADLLAVNSDGNMPYDLCEDEVTLDCIETAMAEQG---ITQEKIEEARAATEHDM---VREIRQLVQAGADLDAPRGHGATLLHIAAANGYAEAAELLLEHRA 256
BLAST of mRNA_Ecto-sp13_S_contig893.20455.1 vs. uniprot
Match: A0A7K5Z890_9AVES (PP16A phosphatase (Fragment) n=2 Tax=Pteroclidae TaxID=56295 RepID=A0A7K5Z890_9AVES) HSP 1 Score: 57.4 bits (137), Expect = 5.450e-5 Identity = 41/124 (33.06%), Postives = 66/124 (53.23%), Query Frame = 1
Query: 502 TPLHRAVSLGFVEICSVLLEAGADLDAVNTMGDAPIHCCWRFWKGDSCKYGLWRKNPYLMTTKKMKEDFARMERDIQSTVSLLRLLTRGGADVDAQRNNGEVALHTAARRGPFMALWILLLSQA 873
TPLH A + G + + +L++ GADL AVN+ G+ P C D+ + + + +T ++++E A ER + V ++ L + GAD+DA R +G LH AA G A +LL +A
Sbjct: 137 TPLHAAATCGHLRLVQLLVQRGADLLAVNSDGNMPYDLCEDEVTLDAIETAMAEQG---ITQERIEEARATTER---AMVQEIQQLAQAGADLDAPRGHGATLLHIAAANGYGEAAELLLEHRA 254
BLAST of mRNA_Ecto-sp13_S_contig893.20455.1 vs. uniprot
Match: A0A3B4AQ06_9GOBI (Protein phosphatase 1, regulatory subunit 16A n=3 Tax=Oxudercinae TaxID=497678 RepID=A0A3B4AQ06_9GOBI) HSP 1 Score: 57.8 bits (138), Expect = 6.230e-5 Identity = 44/137 (32.12%), Postives = 67/137 (48.91%), Query Frame = 1
Query: 502 TPLHRAVSLGFVEICSVLLEAGADLDAVNTMGDAPIHCCWRFWKGDSCKYGLWRKNPYLMTTKKMKEDFARMERDIQSTVSLLRLLTRGGADVDAQRNNGEVALHTAARRGPFMALWILLLSQATHDIID-HRHFTP 909
TPLH A + G + +L++AGADL AVN G+ P C D L + + D R ++ ++ ++ L+ + + GAD++AQ NG LH AA G ++++ LLL Q H H HF P
Sbjct: 135 TPLHAAATCGHTGLVQILIQAGADLLAVNADGNMPYDLC-----EDEATLELLEMAMAEQGITQDRIDECRGAKE-KTMLADLKNMIKNGADLNAQDENGTTLLHIAAANG-YVSVAELLLEQKGHAAQQYHHHFFP 264
BLAST of mRNA_Ecto-sp13_S_contig893.20455.1 vs. uniprot
Match: A0A8C4UK86_FALTI (Protein phosphatase 1 regulatory subunit 16A n=7 Tax=Falco TaxID=8952 RepID=A0A8C4UK86_FALTI) HSP 1 Score: 57.4 bits (137), Expect = 6.630e-5 Identity = 46/137 (33.58%), Postives = 68/137 (49.64%), Query Frame = 1
Query: 502 TPLHRAVSLGFVEICSVLLEAGADLDAVNTMGDAPIHCCWRFWKGDSCKYGLWRKNPYLMTTKKMKEDFARMERDIQSTVSLLRLLTRGGADVDAQRNNGEVAL-HTAARRGPFMALWILLLSQATHDIIDHRHFTP 909
TPLH A + G + + +L++ GADL AVN+ G+ P C D + + + +T +K++E A ER S V +R L + GAD+DA R +G L H AA G A +LL +A D + P
Sbjct: 139 TPLHAAATCGHLRLVQLLIQRGADLLAVNSDGNMPYDLCEDEVTLDCIETAMAEQG---ITQEKIEEARAATER---SMVQEIRQLVQAGADLDAPRGHGGATLLHIAAANGYVEAAELLLEHRAGTSTRDEDGWEP 269 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig893.20455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig893.20455.1 >prot_Ecto-sp13_S_contig893.20455.1 ID=prot_Ecto-sp13_S_contig893.20455.1|Name=mRNA_Ecto-sp13_S_contig893.20455.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=725bp MAEHRKDAQWGVTDFIGKFHLNRMTTPNPIPGTATRVEEERNAFLEKRASback to top mRNA from alignment at Ecto-sp13_S_contig893:581..5121+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig893.20455.1 ID=mRNA_Ecto-sp13_S_contig893.20455.1|Name=mRNA_Ecto-sp13_S_contig893.20455.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4541bp|location=Sequence derived from alignment at Ecto-sp13_S_contig893:581..5121+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig893:581..5121+ >mRNA_Ecto-sp13_S_contig893.20455.1 ID=mRNA_Ecto-sp13_S_contig893.20455.1|Name=mRNA_Ecto-sp13_S_contig893.20455.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2175bp|location=Sequence derived from alignment at Ecto-sp13_S_contig893:581..5121+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |