prot_Ecto-sp13_S_contig89134.20443.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig89134.20443.1
Unique Nameprot_Ecto-sp13_S_contig89134.20443.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length39
Homology
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BLAST of mRNA_Ecto-sp13_S_contig89134.20443.1 vs. uniprot
Match: D8LL13_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL13_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 1.270e-14
Identity = 35/39 (89.74%), Postives = 35/39 (89.74%), Query Frame = 0 
Query:    1 RTDWKKVLTSQRWRAKMLTTSGGQDPVNSCATQSPSRKL 39
            RTDWKKVLTSQRW A MLTTSGGQDP NSCATQSPS KL
Sbjct:  984 RTDWKKVLTSQRWGANMLTTSGGQDPANSCATQSPSSKL 1022
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig89134.20443.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LL13_ECTSI1.270e-1489.74Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sili... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig89134contigEcto-sp13_S_contig89134:15..131 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig89134.20443.1mRNA_Ecto-sp13_S_contig89134.20443.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig89134 15..133 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig89134.20443.1 ID=prot_Ecto-sp13_S_contig89134.20443.1|Name=mRNA_Ecto-sp13_S_contig89134.20443.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=39bp
RTDWKKVLTSQRWRAKMLTTSGGQDPVNSCATQSPSRKL
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