prot_Ecto-sp13_S_contig8904.20426.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8904.20426.1 vs. uniprot
Match: D8LD43_ECTSI (Small nuclear ribonucleoprotein E n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD43_ECTSI) HSP 1 Score: 127 bits (318), Expect = 1.600e-36 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
Query: 14 RTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKNDERKQLGRIMLKGDTITLMQSV 76
RTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKNDERKQLGRIMLKGDTITLMQSV
Sbjct: 33 RTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKNDERKQLGRIMLKGDTITLMQSV 95
BLAST of mRNA_Ecto-sp13_S_contig8904.20426.1 vs. uniprot
Match: UPI00052EA1C7 (small nuclear ribonucleoprotein E n=1 Tax=Tinamus guttatus TaxID=94827 RepID=UPI00052EA1C7) HSP 1 Score: 107 bits (267), Expect = 2.000e-28 Identity = 51/76 (67.11%), Postives = 60/76 (78.95%), Query Frame = 0
Query: 1 GSVCVPPPPYFFQRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKNDERKQLGRIMLKGDTITLMQSV 76
G +C P+ FQR+R+Q+WLYE MRIEG I+GFDEYMNLVLD+AEE+ K RKQLGRIMLKGD ITL+QSV
Sbjct: 46 GCLCSYFAPHRFQRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSV 121
BLAST of mRNA_Ecto-sp13_S_contig8904.20426.1 vs. uniprot
Match: A0A835YX06_9STRA (Small nuclear ribonucleoprotein E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX06_9STRA) HSP 1 Score: 106 bits (265), Expect = 2.020e-28 Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = 0
Query: 14 RTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKNDERKQLGRIMLKGDTITLMQSV 76
RTRVQIWLYENT MRIEG+I GFDEYMNLVLDEAEEVD+K + R Q+GRI+LKGDTITLMQ V
Sbjct: 35 RTRVQIWLYENTTMRIEGRISGFDEYMNLVLDEAEEVDLKKNVRTQVGRILLKGDTITLMQGV 97
BLAST of mRNA_Ecto-sp13_S_contig8904.20426.1 vs. uniprot
Match: UPI000CDA0A63 (small nuclear ribonucleoprotein E n=1 Tax=Cyanistes caeruleus TaxID=156563 RepID=UPI000CDA0A63) HSP 1 Score: 105 bits (261), Expect = 8.230e-28 Identity = 50/73 (68.49%), Postives = 58/73 (79.45%), Query Frame = 0
Query: 4 CVPPPPYFFQRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKNDERKQLGRIMLKGDTITLMQSV 76
C P + FQR+R+Q+WLYE MRIEG I+GFDEYMNLVLD+AEE+ K RKQLGRIMLKGD ITL+QSV
Sbjct: 25 CFSLPLHDFQRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSV 97
BLAST of mRNA_Ecto-sp13_S_contig8904.20426.1 vs. uniprot
Match: UPI00077116DA (small nuclear ribonucleoprotein E isoform X1 n=1 Tax=Parus major TaxID=9157 RepID=UPI00077116DA) HSP 1 Score: 104 bits (260), Expect = 1.430e-27 Identity = 50/73 (68.49%), Postives = 58/73 (79.45%), Query Frame = 0
Query: 4 CVPPPPYFFQRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKNDERKQLGRIMLKGDTITLMQSV 76
C P + FQR+R+Q+WLYE MRIEG I+GFDEYMNLVLD+AEE+ K RKQLGRIMLKGD ITL+QSV
Sbjct: 32 CFSLPFHDFQRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSV 104
BLAST of mRNA_Ecto-sp13_S_contig8904.20426.1 vs. uniprot
Match: A0A7K6GI65_9PASS (Small nuclear ribonucleoprotein E (Fragment) n=1 Tax=Malurus elegans TaxID=720584 RepID=A0A7K6GI65_9PASS) HSP 1 Score: 103 bits (256), Expect = 2.700e-27 Identity = 49/69 (71.01%), Postives = 57/69 (82.61%), Query Frame = 0
Query: 8 PPYFFQRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKNDERKQLGRIMLKGDTITLMQSV 76
P + FQR+R+Q+WLYE MRIEG I+GFDEYMNLVLD+AEE+ K RKQLGRIMLKGD ITL+QSV
Sbjct: 9 PFHRFQRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSV 77
BLAST of mRNA_Ecto-sp13_S_contig8904.20426.1 vs. uniprot
Match: A0A7K7U820_9CHAR (Small nuclear ribonucleoprotein E (Fragment) n=14 Tax=Neognathae TaxID=8825 RepID=A0A7K7U820_9CHAR) HSP 1 Score: 102 bits (255), Expect = 5.530e-27 Identity = 52/79 (65.82%), Postives = 59/79 (74.68%), Query Frame = 0
Query: 1 GSVCVPP---PPYFFQRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKNDERKQLGRIMLKGDTITLMQSV 76
GSV VP QR+R+Q+WLYE MRIEG I+GFDEYMNLVLD+AEE+ K RKQLGRIMLKGD ITL+QSV
Sbjct: 12 GSVYVPDLLLSSIILQRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSV 90
BLAST of mRNA_Ecto-sp13_S_contig8904.20426.1 vs. uniprot
Match: UPI001CFEB29C (small nuclear ribonucleoprotein E-like n=1 Tax=Gracilinanus agilis TaxID=191870 RepID=UPI001CFEB29C) HSP 1 Score: 102 bits (254), Expect = 6.090e-27 Identity = 48/65 (73.85%), Postives = 55/65 (84.62%), Query Frame = 0
Query: 12 FQRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKNDERKQLGRIMLKGDTITLMQSV 76
FQR+R+Q+WLYE MRIEG I+GFDEYMNLVLD+AEE+ K RKQLGRIMLKGD ITL+QSV
Sbjct: 17 FQRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSV 81
BLAST of mRNA_Ecto-sp13_S_contig8904.20426.1 vs. uniprot
Match: A0A7L2B266_9GRUI (Small nuclear ribonucleoprotein E (Fragment) n=2 Tax=Aves TaxID=8782 RepID=A0A7L2B266_9GRUI) HSP 1 Score: 102 bits (254), Expect = 6.820e-27 Identity = 48/65 (73.85%), Postives = 55/65 (84.62%), Query Frame = 0
Query: 12 FQRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKNDERKQLGRIMLKGDTITLMQSV 76
FQR+R+Q+WLYE MRIEG I+GFDEYMNLVLD+AEE+ K RKQLGRIMLKGD ITL+QSV
Sbjct: 21 FQRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSV 85
BLAST of mRNA_Ecto-sp13_S_contig8904.20426.1 vs. uniprot
Match: UPI000522C9AB (small nuclear ribonucleoprotein E n=1 Tax=Haliaeetus albicilla TaxID=8969 RepID=UPI000522C9AB) HSP 1 Score: 102 bits (254), Expect = 7.220e-27 Identity = 51/78 (65.38%), Postives = 59/78 (75.64%), Query Frame = 0
Query: 2 SVCVP---PPPYFFQRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKNDERKQLGRIMLKGDTITLMQSV 76
SV VP P QR+R+Q+WLYE MR+EG I+GFDEYMNLVLD+AEE+ K RKQLGRIMLKGD ITL+QSV
Sbjct: 10 SVSVPVVLSPSIVLQRSRIQVWLYEQVNMRLEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSV 87 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8904.20426.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig8904.20426.1 ID=prot_Ecto-sp13_S_contig8904.20426.1|Name=mRNA_Ecto-sp13_S_contig8904.20426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=77bpback to top |