prot_Ecto-sp13_S_contig89.20397.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig89.20397.1
Unique Name	prot_Ecto-sp13_S_contig89.20397.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	246

Homology

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BLAST of mRNA_Ecto-sp13_S_contig89.20397.1 vs. uniprot
Match: D8LIU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIU0_ECTSI)

HSP 1 Score: 288 bits (737), Expect = 2.580e-95
Identity = 210/230 (91.30%), Postives = 213/230 (92.61%), Query Frame = 0

Query:   16 FLDQPHLSAAALTADFDPPSARLQRNVSLPGALREGGGHGQGQGFVSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEETYNAEGDEMYFTPQHGTGGXXXXXXRGTGFSFPAEGGGAGSGGSIYVTPRSTPRHNEGGVSVDRGESRREAYAHLDSSRERDGFEVGIDRRQSGLTPLGGSFRGGXXXXXXXXXXXXXXXXXXXXXXXAGPNHGAAGAAWPLDTGR 245
            FLDQPHLSAAALTAD DPPSARLQRNVSLPGALREGGGHGQGQGFVSTP XXXXXXXXXXXXXXXXXXXXXXXXXXX   S EE YNAEGDEMYFTPQHGTGG XXXX RGTGFSFPA G GAGSGGSIYVTPRSTPRHNEGG+SVDRGESRREAYAHL+SSRERDGFEV I+RRQSGLT LGGSFRG    XXXXXXXXXXXXXXXXXXXXAGPNHGAAGAAWPLDTGR
Sbjct:   15 FLDQPHLSAAALTADLDPPSARLQRNVSLPGALREGGGHGQGQGFVSTPPXXXXXXXXXXXXXXXXXXXXXXXXXXXGGCSVEEAYNAEGDEMYFTPQHGTGGTXXXXKRGTGFSFPAGGEGAGSGGSIYVTPRSTPRHNEGGMSVDRGESRREAYAHLESSRERDGFEVEIERRQSGLTSLGGSFRG----XXXXXXXXXXXXXXXXXXXXAGPNHGAAGAAWPLDTGR 240

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BLAST of mRNA_Ecto-sp13_S_contig89.20397.1 vs. uniprot
Match: A0A6H5JKD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKD5_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 1.880e-77
Identity = 209/230 (90.87%), Postives = 211/230 (91.74%), Query Frame = 0

Query:   16 FLDQPHLSAAALTADFDPPSARLQRNVSLPGALREGGGHGQGQGFVSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEETYNAEGDEMYFTPQHGTGGXXXXXXRGTGFSFPAEGGGAGSGGSIYVTPRSTPRHNEGGVSVDRGESRREAYAHLDSSRERDGFEVGIDRRQSGLTPLGGSFRGGXXXXXXXXXXXXXXXXXXXXXXXAGPNHGAAGAAWPLDTGR 245
            FLDQPHLSAAALTADFDPPSARL RNVSLPGALREGG HGQGQ FVSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GEETYNAEGDEMYFTP+HGTGGXXXXXX  TGFSFPA        G IYVTPRSTPRHNEGGVS DRGESRREAYAHL+SSRERDGFEVGIDRRQSGLT LGGSFRG XXXXXXXXXXXXXXXXXXXXXXXAGPNHGAAGAAWPLDTGR
Sbjct:  953 FLDQPHLSAAALTADFDPPSARLHRNVSLPGALREGGRHGQGQEFVSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGEETYNAEGDEMYFTPRHGTGGXXXXXXXXTGFSFPAXXXXXXXXG-IYVTPRSTPRHNEGGVSADRGESRREAYAHLESSRERDGFEVGIDRRQSGLTSLGGSFRG-XXXXXXXXXXXXXXXXXXXXXXXAGPNHGAAGAAWPLDTGR 1180

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig89.20397.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig89.20397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LIU0_ECTSI	2.580e-95	91.30	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JKD5_9PHAE	1.880e-77	90.87	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..13
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..245

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig89	contig	Ecto-sp13_S_contig89:2263..4040 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig89.20397.1	mRNA_Ecto-sp13_S_contig89.20397.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig89 2263..4040 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig89.20397.1 ID=prot_Ecto-sp13_S_contig89.20397.1|Name=mRNA_Ecto-sp13_S_contig89.20397.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=246bp
MGAAAATAAAAAGGGFLDQPHLSAAALTADFDPPSARLQRNVSLPGALRE
GGGHGQGQGFVSTPPPSSGVEGGGGYLTTVPTPPLGGGGGRRGGGSGEET
YNAEGDEMYFTPQHGTGGTPQHGKRGTGFSFPAEGGGAGSGGSIYVTPRS
TPRHNEGGVSVDRGESRREAYAHLDSSRERDGFEVGIDRRQSGLTPLGGS
FRGGGGGGRGGALPASTPAAAAAAATAAGPNHGAAGAAWPLDTGR*