mRNA_Ecto-sp13_S_contig12454.2037.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12454.2037.1
Unique NamemRNA_Ecto-sp13_S_contig12454.2037.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12454.2037.1 vs. uniprot
Match: D8LS12_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS12_ECTSI)

HSP 1 Score: 507 bits (1306), Expect = 4.560e-168
Identity = 272/296 (91.89%), Postives = 278/296 (93.92%), Query Frame = 1
Query:    1 LLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQEPVLFAGTIRDNVAHGKPDATDEEIVAAAKAANAHDFIKSFPNAYATDVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKIHKHTTVVIAHRLSTIQDADRIAVVAERGIAELGTHSELMAKNGIYTSLCAMQGPGGXXXXXXXXXXXXXGAEGAVARTARQKSASVESAKMRRQSSSAVMHKGQ-PGGEGGDGVTEGKAKGEDDEAKYPLPPSSRMWALNKPEAGYLILGLIGAL 885
            LLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQEPVLFAGTIRDNVAHGKPDATDEEIV AAKAANAHDFIKSFP+AYATDVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKIHKHTTVVIAHRLSTIQDADRIAVVAE+GIAELGTHSEL+AKNGIYT+LC ++GPG       XXX    GAEG VARTARQKSASVESAKMRRQSSSAVMHKGQ PGGEGGDG  E KAKGEDDEAKYPLPPSSRMWALNKPEAGYLILGLIGAL
Sbjct:  446 LLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQEPVLFAGTIRDNVAHGKPDATDEEIVTAAKAANAHDFIKSFPDAYATDVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKIHKHTTVVIAHRLSTIQDADRIAVVAEQGIAELGTHSELLAKNGIYTALCTIEGPGAGNGSAAXXXAGDNGAEGVVARTARQKSASVESAKMRRQSSSAVMHKGQQPGGEGGDGAAEDKAKGEDDEAKYPLPPSSRMWALNKPEAGYLILGLIGAL 741          
BLAST of mRNA_Ecto-sp13_S_contig12454.2037.1 vs. uniprot
Match: A0A836CDG9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG9_9STRA)

HSP 1 Score: 320 bits (821), Expect = 1.910e-97
Identity = 180/295 (61.02%), Postives = 217/295 (73.56%), Query Frame = 1
Query:    1 LLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQEPVLFAGTIRDNVAHGKPDATDEEIVAAAKAANAHDFIKSFPNAYATDVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKIHKHTTVVIAHRLSTIQDADRIAVVAERGIAELGTHSELMAKNGIYTSLCAMQGPGGXXXXXXXXXXXXXGAEGAVARTARQKSASVESAKMRRQSSSAVMHKGQPGGEGGDGVTEGKAKGEDDEAKYPLPPSSRMWALNKPEAGYLILGLIGAL 885
            LLLRFYDPTSG + LDG D++SLN+ +YR +IGYVGQEPVLF+G+IRDN+A+GKP ATDEEI  AAKAANAH+FIK FP  Y T+VG GGLQLSGGQKQR+AIARAIIKDPAILLLDEATSALDSESEKVVQQALD+L  + + TT+ IAHRLSTIQ++DRIAVVA +GIAE+GTH+EL A  G+Y +LC  QG G               A G   +  R +S+S + A+    +SS ++  G  G EG DG   G  K ED     P  P  R+WALNKP+AG++ +GL GAL
Sbjct:  375 LLLRFYDPTSGCIRLDGADIRSLNLNWYRQQIGYVGQEPVLFSGSIRDNIANGKPGATDEEITNAAKAANAHEFIKGFPKGYGTNVGEGGLQLSGGQKQRVAIARAIIKDPAILLLDEATSALDSESEKVVQQALDKLQTLKRRTTITIAHRLSTIQNSDRIAVVANKGIAEIGTHAELTALGGLYAALCRAQGSGATAEESAELERQDSLARGQSLQRMRSQSSSAQMAR----ASSLMLGDGGEG-EGADGGAGGVVK-ED----APRAPMGRLWALNKPDAGFVAIGLGGAL 659          
BLAST of mRNA_Ecto-sp13_S_contig12454.2037.1 vs. uniprot
Match: A0A836CGZ9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ9_9STRA)

HSP 1 Score: 313 bits (803), Expect = 6.340e-95
Identity = 177/296 (59.80%), Postives = 214/296 (72.30%), Query Frame = 1
Query:    1 LLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQEPVLFAGTIRDNVAHGKPDATDEEIVAAAKAANAHDFIKSFPNAYATDVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKIHKHTTVVIAHRLSTIQDADRIAVVAERGIAELGTHSELMAKNGIYTSLCAMQGPGGXXXXXXXXXXXXXGAEGAVARTAR-QKSASVESAKMRRQSSSAVMHKGQPGGEGGDGVTEG-KAKGEDDEAKYPLPPSSRMWALNKPEAGYLILGLIGA 882
            LLLRFYDPTSG++ LDG D++SLN+ +YR +IGYVGQEPVLFAG+IRDN+A+GKP ATDEEI+ AAKAANAH+FIK FP  Y TDVG GGLQLSGGQKQR+AIARAIIKDPAILLLDEATSALDSESEKVVQQALD+LH++ + TT+ IAHRLSTIQ++DRIAV+A +G+AE+GTH+EL A  GIY+ LC  QG G              GA G  A  A   KS    S +  R  SS+V           DG  +G K          P  P SR+WALN+P+  ++++GL+GA
Sbjct:  376 LLLRFYDPTSGAIKLDGMDIRSLNLNWYRQQIGYVGQEPVLFAGSIRDNIANGKPGATDEEIINAAKAANAHEFIKGFPKGYRTDVGEGGLQLSGGQKQRVAIARAIIKDPAILLLDEATSALDSESEKVVQQALDKLHELKRRTTITIAHRLSTIQNSDRIAVIANKGVAEIGTHAELTALGGIYSQLCKAQGGG---------TGAAAGATGDDALDAETDKSLRDYSMQRTRSHSSSV-----------DGAVKGGKKXXXXXXXDAPRAPMSRLWALNRPDWMWVVVGLVGA 651          
BLAST of mRNA_Ecto-sp13_S_contig12454.2037.1 vs. uniprot
Match: A0A6H5L6B5_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B5_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 1.120e-93
Identity = 184/272 (67.65%), Postives = 186/272 (68.38%), Query Frame = 1
Query:    1 LLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQEPVLFAGTIRDNVAHGKPDATDEEIVAAAKAANAHDFIKSFPNAYATDVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKIHKHTTVVIAHRLSTIQDADRIAVVAERGIAELGTHSELMAKNGIYTSLCAMQGPGGXXXXXXXXXXXXXGAEGAVARTARQKSASVESAKMRRQSSSAVMHKGQPGGEGGDGVTEGKAKGEDDEAKYPLPP 816
            LLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQ                                    FIKSFP+AYATDVGTGGLQLSGGQKQ                              VVQQALDRLHKIHKHTTVVIAHRLSTIQDADRIAVVAERGIAELGTHSEL+AKNGIYTSLCAMQGPGG             GAEGAVARTARQKSASVESAKMRRQSSSAVMHKGQPGGEGGDG TE KAKGEDDE    L P
Sbjct:  228 LLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQ------------------------------------FIKSFPSAYATDVGTGGLQLSGGQKQ------------------------------VVQQALDRLHKIHKHTTVVIAHRLSTIQDADRIAVVAERGIAELGTHSELLAKNGIYTSLCAMQGPGGGNGSAAATAGGDDGAEGAVARTARQKSASVESAKMRRQSSSAVMHKGQPGGEGGDGGTEAKAKGEDDEMAGSLFP 433          
BLAST of mRNA_Ecto-sp13_S_contig12454.2037.1 vs. uniprot
Match: A0A835Z4J1_9STRA (ATP-binding cassette, sub-family B, member 1A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J1_9STRA)

HSP 1 Score: 311 bits (796), Expect = 1.990e-93
Identity = 183/334 (54.79%), Postives = 223/334 (66.77%), Query Frame = 1
Query:    1 LLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQEPVLFAGTIRDNVAHGKPDATDEEIVAAAKAANAHDFIKSFPNAYATDVGTGGLQLSGGQKQRIAIARAIIKDPAILLL-----------------------------------DEATSALDSESEKVVQQALDRLHKIHKHTTVVIAHRLSTIQDADRIAVVAERGIAELGTHSELMAKNGIYTSLCAMQGPGGXXXXXXXXXXXXXGAEGAVARTARQKSA-SVESAKMRRQSSSAVMHKGQPGGEGGDGVTEGKAKGE----DDEAKYPLPPSSRMWALNKPEAGYLILGLIGA 882
            LLLRFYDPTSG++ LDG D++SLN+ +YR +IGYVGQEPVLFAG+IRDN+A+GKP ATD+EI+ AAKAANAH+FIK FP  Y T+VG GGLQLSGGQKQR+AIARAIIKDPAILLL                                   DEATSALDSESEKVVQQALDRLH++ + TT+ IAHRLSTIQ++DRIAV+A RG+AE+GTHSELMA +GIY  LCA Q                 GA+ A     RQ SA +     +R  SSSA+   G  GG+  +G  EG AKG+    DD A  P  P SR+WA+ +P+  ++ +G+ GA
Sbjct:  479 LLLRFYDPTSGAIKLDGMDIRSLNLNWYRQQIGYVGQEPVLFAGSIRDNIANGKPGATDDEIINAAKAANAHEFIKGFPKGYNTEVGEGGLQLSGGQKQRVAIARAIIKDPAILLLEXXXXXXXXXXXXXXXILRVXXXXXXXXXXXXXLSDEATSALDSESEKVVQQALDRLHELKRRTTITIAHRLSTIQNSDRIAVIANRGVAEIGTHSELMALDGIYAQLCAAQS---------------GGADAAQRALRRQSSAEATRQRSLRDNSSSAMAAIG--GGQADEGAGEGGAKGKTGKKDDNADKPKAPLSRLWAMQRPDWPWVAMGIGGA 795          
BLAST of mRNA_Ecto-sp13_S_contig12454.2037.1 vs. uniprot
Match: D7FHL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL4_ECTSI)

HSP 1 Score: 304 bits (779), Expect = 1.350e-91
Identity = 182/305 (59.67%), Postives = 215/305 (70.49%), Query Frame = 1
Query:    1 LLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQEPVLFAGTIRDNVAHGKPDATDEEIVAAAKAANAHDFIKSFPNAYATDVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKIHKHTTVVIAHRLSTIQDADRIAVVAERGIAELGTHSELMAKNGIYTSLCAMQGPGGXXXXXXXXXXXXXGAEGAV-ARTARQKS---------ASVESAKMRRQSSSAVMHKGQPGGEGGDGVTEGKAKGEDDEAKYPLPPSSRMWALNKPEAGYLILGLIGAL 885
            LLLRFYDPTSG++ LDG D+KSLNV +YR +IGYVGQEPVLFAGTI  N+A+GK  +T +EI+AAA+AANAH+FIKSFP  Y T VG GG QLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQ ALD+LHK    TTV IAHRLSTI+ AD+IAV+ ++G+ ELGTHSEL+A NG+Y  LC  QG                  E  + AR ARQKS         AS   A +RRQSS+       PG E     + GK   + +E K P PP  RMW+LNK +  +L+LG+IGA+
Sbjct:  407 LLLRFYDPTSGTVTLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIALNIANGKLGSTQDEIIAAARAANAHEFIKSFPEGYNTGVGEGGFQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQAALDKLHKDKPRTTVTIAHRLSTIRGADKIAVI-DKGVVELGTHSELLALNGVYHMLCTSQG-----------GKTEEEIEADIQARLARQKSLSGAKVTREASGSDALLRRQSSNV-----NPGQEIDLSASAGKKDAKVEEEKLPKPPRGRMWSLNKGDWPWLVLGVIGAI 694          
BLAST of mRNA_Ecto-sp13_S_contig12454.2037.1 vs. uniprot
Match: D7FHL1_ECTSI (ATP-binding cassette, sub-family B (MDR/TAP), member 1A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL1_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 1.000e-89
Identity = 179/296 (60.47%), Postives = 212/296 (71.62%), Query Frame = 1
Query:    1 LLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQEPVLFAGTIRDNVAHGKPDA-TDEEIVAAAKAANAHDFIKSFPNAYATDVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKIHKHTTVVIAHRLSTIQDADRIAVVAERGIAELGTHSELMAKNGIYTSLCAMQGPGGXXXXXXXXXXXXXGAEGAVA-RTARQKSASVESAKMRRQSSSAVMHKGQPGGEGGDGVTEGKAKGEDDEAKYPLPPSSRMWALNKPEAGYLILGLIGA 882
            LLLRFYDPTSGS+ LDG D+KSLNV +YR +IGYVGQEPVLFAGTI  N+A+GK  A T +EIVAAAKAANAHDFI+SFP+ Y T VG GG QLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQ ALD+LHK    TTV IAHRLSTIQ AD+IAV+ ++G+ ELGTHSEL+A NG+Y +LC+ Q  G              G + A+  RT+ +  AS   A   +  S      G    +G  G  + K+K E+ E K P P S RMWALNK +  +L++G +GA
Sbjct:  437 LLLRFYDPTSGSVSLDGTDIKSLNVAWYRQQIGYVGQEPVLFAGTIGLNIANGKHGAATQDEIVAAAKAANAHDFIESFPDGYNTGVGEGGFQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQAALDQLHKDKPRTTVTIAHRLSTIQGADKIAVI-DKGVVELGTHSELLALNGVYHTLCSSQTGG--------TTEGLAGGDNAMELRTSNENIASESGAGDVKSGSPKDATPGGAPMDGSSGADKQKSK-EEQEEKLPAPASGRMWALNKGDWPWLLMGFVGA 722          
BLAST of mRNA_Ecto-sp13_S_contig12454.2037.1 vs. uniprot
Match: D7FHL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL5_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 3.130e-86
Identity = 172/284 (60.56%), Postives = 197/284 (69.37%), Query Frame = 1
Query:    1 LLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQEPVLFAGTIRDNVAHGKPDATDEEIVAAAKAANAHDFIKSFPNAYATDVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKIHKHTTVVIAHRLSTIQDADRIAVVAERGIAELGTHSELMAKNGIYTSLCAMQGPGGXXXXXXXXXXXXXGAEGAVARTARQKS---------ASVESAKMRRQSSSAVMHKGQPGGEGGDGVTEGKAKGEDDEAKYPLPPSSR 825
            LLLRFYDPTSG++ LDG D+KSLNV +YR +IGYVGQEPVLFAGTI  N+A+GK  +T +EI+ AAKAANAH+FIKSFP  Y T VG GG QLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQ ALD LHK    TTV IAHRLSTI+ AD+IAV+ ++G+ ELGTHSEL+A NG+Y  LC  QG  G                   AR ARQKS         AS   A +RRQSS+       PG E     + GK   + +E K P PPS+R
Sbjct:  418 LLLRFYDPTSGTVTLDGTDIKSLNVAWYRQRIGYVGQEPVLFAGTIALNIANGKLGSTQDEIITAAKAANAHEFIKSFPEGYNTGVGEGGFQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQAALDELHKDKPRTTVTIAHRLSTIRGADKIAVI-DKGVVELGTHSELLALNGVYHMLCTSQG--GKTEEEIEADKQ--------ARLARQKSFSGAKVTREASGSDALLRRQSSNF-----NPGQEIDLSASAGKKDAKVEEEKLPKPPSAR 685          
BLAST of mRNA_Ecto-sp13_S_contig12454.2037.1 vs. uniprot
Match: A0A7S3XS79_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS79_HETAK)

HSP 1 Score: 250 bits (639), Expect = 3.280e-79
Identity = 123/191 (64.40%), Postives = 154/191 (80.63%), Query Frame = 1
Query:    1 LLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQEPVLFAGTIRDNVAHGKPDATDEEIVAAAKAANAHDFIKSFPNAYATDVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKIHKHTTVVIAHRLSTIQDADRIAVVAERGIAELGTHSELMAKNGIYTSLCA 573
            L+LRFYDP  G++ LDG D++ LN+++YR KIGYVGQEPVLFAGT+R NV  G+P ATD E+  AA+AANAH FI++FP  Y TDVG  G+QLSGGQKQRIAIARA+IK P ILLLDEATSALD+ESE+VVQ+ALDR+      TT+V+AHRL+T+Q+ DRIAV++   + E+G H EL+AK GIY SL +
Sbjct:   34 LVLRFYDPREGAVCLDGQDIRGLNLKWYRSKIGYVGQEPVLFAGTVRTNVRSGRPGATDAEVQQAAEAANAHGFIQAFPQGYETDVGEAGVQLSGGQKQRIAIARALIKAPKILLLDEATSALDNESERVVQEALDRIQAASAFTTLVVAHRLTTVQNCDRIAVISGGQVKEIGPHKELLAKGGIYASLAS 224          
BLAST of mRNA_Ecto-sp13_S_contig12454.2037.1 vs. uniprot
Match: T0PRI0_SAPDV (ATP-binding cassette, subfamily B (MDR/TAP), member 1 (Fragment) n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0PRI0_SAPDV)

HSP 1 Score: 247 bits (630), Expect = 1.430e-78
Identity = 130/194 (67.01%), Postives = 154/194 (79.38%), Query Frame = 1
Query:    1 LLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQEPVLFAGTIRDNVAHGKPDATDEEIVAAAKAANAHDFIKSFPNAYATDVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKIHKHTTVVIAHRLSTIQDADRIAVVAERGIAELGTHSELM-AKNGIYTSLCAMQ 579
            LL RFYDP SG++FLDGHD++SLNVQ  R  I  V QEPVLFAGTI DN+A GKP AT  EI  AAK ANAHDFI  FPN Y T VG  G+Q+SGGQKQRIAIARAII+DPA+LLLDEATSALD+ESE++VQ++LDRL K  + TTV++AHRLSTI++AD IAVV +  + ELGTH EL+   NG+Y +L A Q
Sbjct:   31 LLERFYDPASGAVFLDGHDLRSLNVQSLRSHISIVSQEPVLFAGTIADNIATGKPGATMAEIEDAAKKANAHDFIMRFPNGYETTVGDRGVQVSGGQKQRIAIARAIIRDPAVLLLDEATSALDTESERIVQESLDRLLKQKRRTTVIVAHRLSTIRNADMIAVVNDGKVCELGTHDELVNLPNGLYANLVARQ 224          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12454.2037.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS12_ECTSI4.560e-16891.89Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A836CDG9_9STRA1.910e-9761.02ATP-binding cassette, sub-family B, member 1A n=1 ... [more]
A0A836CGZ9_9STRA6.340e-9559.80ATP-binding cassette, sub-family B, member 1A n=1 ... [more]
A0A6H5L6B5_9PHAE1.120e-9367.65ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A835Z4J1_9STRA1.990e-9354.79ATP-binding cassette, sub-family B, member 1A n=2 ... [more]
D7FHL4_ECTSI1.350e-9159.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHL1_ECTSI1.000e-8960.47ATP-binding cassette, sub-family B (MDR/TAP), memb... [more]
D7FHL5_ECTSI3.130e-8660.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XS79_HETAK3.280e-7964.40Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
T0PRI0_SAPDV1.430e-7867.01ATP-binding cassette, subfamily B (MDR/TAP), membe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12454contigEcto-sp13_S_contig12454:104..4463 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score513.5
Seed ortholog evalue6.7e-143
Seed eggNOG ortholog2880.D8LS12
Model size885
KEGG koko:K05658
KEGG TC3.A.1.201
KEGG Pathwayko02010,ko04976,ko05206,ko05226,map02010,map04976,map05206,map05226
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1132@1,KOG0055@2759
EC3.6.3.44
Cds size885
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko04090,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12454.2037.1prot_Ecto-sp13_S_contig12454.2037.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12454 104..4463 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462663.2935052-CDS-Ecto-sp13_S_contig12454:103..2141681462663.2935052-CDS-Ecto-sp13_S_contig12454:103..214Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12454 104..214 +
1681462663.3037567-CDS-Ecto-sp13_S_contig12454:986..10941681462663.3037567-CDS-Ecto-sp13_S_contig12454:986..1094Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12454 987..1094 +
1681462663.3121006-CDS-Ecto-sp13_S_contig12454:1658..17361681462663.3121006-CDS-Ecto-sp13_S_contig12454:1658..1736Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12454 1659..1736 +
1681462663.320226-CDS-Ecto-sp13_S_contig12454:2184..22741681462663.320226-CDS-Ecto-sp13_S_contig12454:2184..2274Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12454 2185..2274 +
1681462663.3282135-CDS-Ecto-sp13_S_contig12454:2824..30161681462663.3282135-CDS-Ecto-sp13_S_contig12454:2824..3016Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12454 2825..3016 +
1681462663.3399098-CDS-Ecto-sp13_S_contig12454:3271..34871681462663.3399098-CDS-Ecto-sp13_S_contig12454:3271..3487Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12454 3272..3487 +
1681462663.3479083-CDS-Ecto-sp13_S_contig12454:4373..44631681462663.3479083-CDS-Ecto-sp13_S_contig12454:4373..4463Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12454 4374..4463 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12454.2037.1

>prot_Ecto-sp13_S_contig12454.2037.1 ID=prot_Ecto-sp13_S_contig12454.2037.1|Name=mRNA_Ecto-sp13_S_contig12454.2037.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=295bp
LLLRFYDPTSGSLFLDGHDVKSLNVQYYRGKIGYVGQEPVLFAGTIRDNV
AHGKPDATDEEIVAAAKAANAHDFIKSFPNAYATDVGTGGLQLSGGQKQR
IAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKIHKHTTVVIA
HRLSTIQDADRIAVVAERGIAELGTHSELMAKNGIYTSLCAMQGPGGGNG
STAAAGGGDDGAEGAVARTARQKSASVESAKMRRQSSSAVMHKGQPGGEG
GDGVTEGKAKGEDDEAKYPLPPSSRMWALNKPEAGYLILGLIGAL
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mRNA from alignment at Ecto-sp13_S_contig12454:104..4463+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12454.2037.1 ID=mRNA_Ecto-sp13_S_contig12454.2037.1|Name=mRNA_Ecto-sp13_S_contig12454.2037.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4360bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12454:104..4463+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTTCTCCTTAGGTTCTACGACCCCACCTCGGGAAGCCTTTTCCTGGACGG GCACGACGTCAAGAGCCTGAACGTGCAGTACTACCGGGGGAAGATCGGAT ACGTCGGACAGGTGCTTGGGTTCGGTACTTTAATCTCTGTGTGTGTGTGT ATTTTTTTGTTTGCATCGACCGCGCTAACTAACTGGCTTGACCAGAGAAA CTTCATCAGTCTCCGTGGATCCCCGGGAGTTGGCTTCATGGACTTGTGTG TGTGCGTGTGTTTTTTTGTTTTTATTTCCCGTGTACCTTCCGAAAGAGCG TTTTCTCTCCGTCTCTTGTGCGCGTCATGTGCATACAATAGTTGGTTTGT TGTGCGAAAATGACATCCCCAACTTTTGAGAGTCTTCAACAAGCACGGGT TCAGCAGTGGCTACTCTTGTTTTTATGCGACTCCTGCGTCACGTACTGTA CGCGTAAAGTTCACTTCCTTCCAGCCGTCGATCCTTGCAGCTTCTGTGTC TCACGTCCCGTCTTCTTGTCGTGGCCGGCATCGTGGGACATCCTTCGCGA GAAATGAAGTATTGAAGAAACAGATAAGAGAAGGGGCACTCAGACCCTAT TGCCTTCACGAGAGATGAAGTATTGAGGAAAGAGATAAACGAAAGGTGCA CGCAGACCCTATTCGCTTTCACGAGAAATGAAGTGTTGAGGAAGTAGATA AGAAGGAGGGCCACGTAGACCCTATCCCTAACCCATCTTCCCCGATTGCA TGCTTTATGTCTGTTTCATATTTCTACGACAACCCTGGGAAGGCTACAGG CATCGCGTGCCTTTTATTCTCTCACACCGCGTGTCGTGTTTGGGCGTCGT GCACTTTTTTTTTTTTTTCTGTTTTTCCCGCAGGAACCCGTGCTGTTCGC CGGAACGATCCGTGACAACGTCGCTCACGGAAAGCCTGACGCTACCGACG AAGAGATCGTGGCCGCTGCTAAGGCAGCCAACGCACACGACGTGAGCGAG CGAGCATGTTTCAAGAGAACGGGGTGCTTTTGTGAAAACATGCGCCCCCC CACACCCACGTGCAAAGCTACGTAGTGTTGATTGGTGGCTACGTAGTGGC CAGATACCTGAACGTACACTTCATGGTTGTTGTGTGGTTTTCGGTGGCTA TGTAGTGTCTGGATGCCTGAGGAAGGCAGTCGACGCACACAGCGTGAGGA GCGAGCATGCTTGTTGGAAGAGAAAAATATCTATGCGCCACATACCCCCC CACCTCCCCCGTGTGGTCTTTTTCTTGGCAAATTACTACACTTTTGGCTC GACCCGAAATAAATGTTTGGTTGATGTTTCCTGCAAGACACGGCGGGCCG TGCGGTAAATTAGGCCATCTCTTCTCTACTATTGCTGTGACAACCTCTTT CCCACCGACACCCCCGCCTGACTCCGGACTTGTCCCCCTGCTGCAACCAA CCTCGCGCTCGCTCACTCCGCTTCGTCGATGGGACGACGTGGTGATGGTG GCCACGCTGTGCGTGACGCGCGGGTATTGCGATATCGGCGTTTTTCTTTT GTCAGTTTATCAAGAGCTTCCCGAACGCGTACGCGACGGACGTGGGGACC GGCGGCCTTCAGCTATCGGGGGGACAGAAGCAGGTGACAGCTAGACAGAC AGAAATACTTGTGCTGTAAAGCGACAACAGCAATCGCGCTGCAGGTCTTG AACACGTGTTGCTTGCCAGATGCAAGCTCCACATGAAATGGTCAGGAGAG GGTGATAAAAGCGGCATCAGCAGCAGCTGGTCGGCGTTTGTTATCAGCAA AAGCACCGACCGATCAGCTGCCGCTTGTGCCCGATTCCGGGAGGCGAAGA GAGAGTCCAAACGACGGCATCAACCAACGCTCATCTCCACCCTGTTTCCA CTGCTACTGCTGCTTCTGCCGCTGCTGCTTCTGCTGCTGCTGCTGCTGCT GCTGCTGCTGCTGCTGCTGCTGCTGCTGATGATGATGATGATGATGATGA TGATGATGGTGATGATGATGATGGTGATGATGATGATGTCGTGCTCACGT TCGCGCTTGGCGAACTACCGTTGCTCTTCAGAGGATTGCCATCGCCCGAG CGATCATCAAGGACCCTGCTATCTTGCTCCTTGACGAGGCTACCTCGGCA CTCGACAGCGAGAGCGAGAAAGTGAGCCGGGTTCATACCTCTGTTGTTGG TGTTGTTGATGTTGTCGTCACTGTCGGGTTGTTTTTGTGCTGACGGGCGG TGTGCGCCGCATGCGTATCAAGCTGTTGCCTCGGACCACCTTCCCTTGTC AAGAATAGTGTGATACATGGAACATCGAGTCCATGGTACCCACGCGAAGA TCAATGGGGCGCTTGTCCGCCCCCCCCCCCCTTCCCCACCTGAGGTGTGT GGTGGTAAAGCAAATATTTCGGCAAAAAAACTGAGCAAATTTAGGCCCCA TTCAAAAGAGGAATAAACCGCACCCTGCGTGACCCCCGCTGATGCATTCA GAAATCATGCCGACAGAACAGGGTGTGCAAAAGACTCACGTGTAGCGAAC TAGATGAGACAGCATACGTAAACACTGAGCCCCACCGAGACTGACGTTTG ACTTAGTGAGCCGGTTAGCGCGTTCGATGCTCAATCAAGAAAACTCTCTC TCACACACACACCTTTCCTCGTCCGCTTTGCGATGCCCCGTTCACCCCCC CAAAAAAAAATCCCCGAGCAGGTGGTTCAGCAGGCCCTTGACCGTCTGCA CAAGATCCACAAGCACACCACGGTGGTGATCGCTCACCGGCTGTCCACCA TCCAGGATGCCGATCGCATCGCCGTCGTCGCCGAGCGGGGCATCGCAGAG CTTGGCACCCACTCGGAGCTGATGGCTAAGAATGGCATTTACACTTCCCT CTGCGCCATGCAGGTGTGTGTGTGTATGTGTGTGTTTGGGGTATGCTGAA TTTGTTTTAGCACTCCATCTTCCCCGCTGCCACCCCATGTCTAACAGTGA AATTTTTGCACCGTCGGCAAAGTAGGAACAAGCGGTTGACCATCGGTGAT TCGGTCCTGTAGGAAGGAACAATACTCCGTCCTCTCGAGGACTCGTGGCC AATGGTCGAACATCTAAGGCATGCGAAACATGATCCCCCCCCCCCTCCCA TCACCGCAACACAACCAGGGGCCAGGAGGAGGCAACGGTTCCACGGCTGC CGCCGGCGGCGGCGATGATGGGGCCGAAGGCGCCGTCGCCAGGACGGCGA GGCAGAAGTCGGCCTCGGTGGAGAGCGCCAAGATGCGGCGGCAGTCGAGC TCGGCCGTGATGCACAAGGGGCAGCCCGGCGGAGAGGGTGGCGACGGCGT TACCGAGGGCAAGGCAAAGGGGGAAGACGACGAGGTGCGACACGATATAT GTAGATAGCGCGCGGTTATCTTTTTTCTTCCTACAATGGTGGTGATTGGC TGATGCGAATGTCTTCGCCTCATCCTCACCCACCGTTGAATTTACACGCA CTGCTGATGATGATGCTGAGCTTTTTCGGCGGACATTTGTTCGTTCGTTC GGATGACTTTGACCACCTTCGCTGGGGGTCGAGAAGTATGTCACATAGGG GGGGTCTTGTTTGCCTCTTTCCCCGTGTTTGGTGTTTTTTATTGACCTGA AACGAGCAAATTCCTACAGCAGTAGATGCCACCACGAGGTTTGTCGGGGT TTTGAGGGTCTCAAAACCGTACGTATGCCTAGCCGTGTTTGGCGCGTTGT CTTCGTCCTGACGAGCACGTCACCATCACCGCCACCACCACGCAGCAGTC ACGACCCGCATTTACGCAGCGTGTTGTTGATTTTTTTTCGTAAGGGGGAG GATCACACAGAAAAGGAATTCACTGTTAGCGTTGCTGTGCCGCTTGTCTT GCTGAGGGAATATTCCACAGGGTTGCCGAAAAGGTGCGAGCCATCGCACG TGCACGCCCTGGCGCCTAGGTCTTGCGGAGCGGCAGTTCCTTCGTCAAGC AATCACCAACTTTGCGTCCCCCCTCTCCTTCACTTACTTGCTGGCCGCGT TGTACTACAATACTGCATGTCCTTCGACGTGCTTTCGTCGCGCCAGAAGC CACTCTTATACTAATTCTCTCCGTGTATTCTCCTTGATGTTTGTGCGATT TTTCGACTATCTATTTCTTTCCTCTCTGCGTATGCTACGATACTAGTGAT GTTTTTGGGATTTTCGACTATTGTTTTTTTCCGTGACTGTTGTTCTTGTG TGTTTGTGGCCTTGTCGCAGGCCAAGTACCCTCTCCCTCCGTCGTCGAGG ATGTGGGCGCTCAACAAGCCCGAGGCGGGGTACCTCATCCTGGGACTCAT CGGTGCCCTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12454:104..4463+

>mRNA_Ecto-sp13_S_contig12454.2037.1 ID=mRNA_Ecto-sp13_S_contig12454.2037.1|Name=mRNA_Ecto-sp13_S_contig12454.2037.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=885bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12454:104..4463+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTTCTCCTTAGGTTCTACGACCCCACCTCGGGAAGCCTTTTCCTGGACGG
GCACGACGTCAAGAGCCTGAACGTGCAGTACTACCGGGGGAAGATCGGAT
ACGTCGGACAGGAACCCGTGCTGTTCGCCGGAACGATCCGTGACAACGTC
GCTCACGGAAAGCCTGACGCTACCGACGAAGAGATCGTGGCCGCTGCTAA
GGCAGCCAACGCACACGACTTTATCAAGAGCTTCCCGAACGCGTACGCGA
CGGACGTGGGGACCGGCGGCCTTCAGCTATCGGGGGGACAGAAGCAGAGG
ATTGCCATCGCCCGAGCGATCATCAAGGACCCTGCTATCTTGCTCCTTGA
CGAGGCTACCTCGGCACTCGACAGCGAGAGCGAGAAAGTGGTTCAGCAGG
CCCTTGACCGTCTGCACAAGATCCACAAGCACACCACGGTGGTGATCGCT
CACCGGCTGTCCACCATCCAGGATGCCGATCGCATCGCCGTCGTCGCCGA
GCGGGGCATCGCAGAGCTTGGCACCCACTCGGAGCTGATGGCTAAGAATG
GCATTTACACTTCCCTCTGCGCCATGCAGGGGCCAGGAGGAGGCAACGGT
TCCACGGCTGCCGCCGGCGGCGGCGATGATGGGGCCGAAGGCGCCGTCGC
CAGGACGGCGAGGCAGAAGTCGGCCTCGGTGGAGAGCGCCAAGATGCGGC
GGCAGTCGAGCTCGGCCGTGATGCACAAGGGGCAGCCCGGCGGAGAGGGT
GGCGACGGCGTTACCGAGGGCAAGGCAAAGGGGGAAGACGACGAGGCCAA
GTACCCTCTCCCTCCGTCGTCGAGGATGTGGGCGCTCAACAAGCCCGAGG
CGGGGTACCTCATCCTGGGACTCATCGGTGCCCTG
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