prot_Ecto-sp13_S_contig88535.20347.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig88535.20347.1
Unique Nameprot_Ecto-sp13_S_contig88535.20347.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length51
Homology
BLAST of mRNA_Ecto-sp13_S_contig88535.20347.1 vs. uniprot
Match: A0A6H5KCD9_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCD9_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 3.060e-27
Identity = 48/51 (94.12%), Postives = 48/51 (94.12%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRAPITDVAWNPDQGQHLVTGGRD 51
            MATAAQNGSCIVWDLKQKKPWCELRDPNRAPITDVAWNPDQGQHLVT   D
Sbjct:  204 MATAAQNGSCIVWDLKQKKPWCELRDPNRAPITDVAWNPDQGQHLVTASGD 254          
BLAST of mRNA_Ecto-sp13_S_contig88535.20347.1 vs. uniprot
Match: D8LBR5_ECTSI (Vesicle coat complex COPII, subunit SEC31 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR5_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 3.060e-27
Identity = 48/51 (94.12%), Postives = 48/51 (94.12%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRAPITDVAWNPDQGQHLVTGGRD 51
            MATAAQNGSCIVWDLKQKKPWCELRDPNRAPITDVAWNPDQGQHLVT   D
Sbjct:  189 MATAAQNGSCIVWDLKQKKPWCELRDPNRAPITDVAWNPDQGQHLVTASGD 239          
BLAST of mRNA_Ecto-sp13_S_contig88535.20347.1 vs. uniprot
Match: A0A7S3Y0U1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0U1_HETAK)

HSP 1 Score: 89.4 bits (220), Expect = 8.190e-20
Identity = 37/51 (72.55%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRAPITDVAWNPDQGQHLVTGGRD 51
            +ATA QNGSCIVWDL+QKKPWCEL+D  R  I DVAWNPDQG H+VT   D
Sbjct:  181 LATAGQNGSCIVWDLRQKKPWCELKDTIRGRIADVAWNPDQGLHIVTASGD 231          
BLAST of mRNA_Ecto-sp13_S_contig88535.20347.1 vs. uniprot
Match: A0A7S2XZL8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZL8_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.110e-19
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRAPITDVAWNPDQGQHLVTGGRD 51
            +AT+AQNG+CIVWDL+QKKPWCELRD  RAPI D+ WNP QG H++T   D
Sbjct:  194 LATSAQNGTCIVWDLRQKKPWCELRDAARAPIPDMCWNPTQGLHIITASGD 244          
BLAST of mRNA_Ecto-sp13_S_contig88535.20347.1 vs. uniprot
Match: A0A7S2GC77_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GC77_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.280e-17
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRAPITDVAWNPDQGQHLVT 47
            +A+A+QNGSC+VWDL+ KKPWCELRDP RA I D+AWNP +G H++T
Sbjct:  216 LASASQNGSCMVWDLRSKKPWCELRDPARACIADIAWNPVEGLHMMT 262          
BLAST of mRNA_Ecto-sp13_S_contig88535.20347.1 vs. uniprot
Match: A0A4D9D4C1_9STRA (WW domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4C1_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 3.120e-17
Identity = 32/51 (62.75%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRAPITDVAWNPDQGQHLVTGGRD 51
            +A+ + NGS IVWDL+QKKP+CELRDP R P+ D+AWNPD+G H+VT   D
Sbjct:  193 LASCSGNGSTIVWDLRQKKPYCELRDPARGPVADIAWNPDEGLHMVTASGD 243          
BLAST of mRNA_Ecto-sp13_S_contig88535.20347.1 vs. uniprot
Match: A0A482RVV6_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVV6_9ARCH)

HSP 1 Score: 80.9 bits (198), Expect = 1.070e-16
Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRAPITDVAWNPDQGQHLVTGGRD 51
            +A+AAQNGS  +WDL+QK+ WCELRDP    + D+AWNPDQG H+VT   D
Sbjct:  115 LASAAQNGSTYIWDLRQKRAWCELRDPANGVVADIAWNPDQGLHIVTASGD 165          
BLAST of mRNA_Ecto-sp13_S_contig88535.20347.1 vs. uniprot
Match: A0A662WHK5_9STRA (Sec16_C domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHK5_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.760e-16
Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRAPITDVAWNPDQGQHLVTGGRD 51
            +AT +QNG+ +VWDLKQKKPWCELRDP R  +T +AWNP++G  L T   D
Sbjct:  198 LATGSQNGNVVVWDLKQKKPWCELRDPARGAVTAIAWNPNEGLQLATASGD 248          
BLAST of mRNA_Ecto-sp13_S_contig88535.20347.1 vs. uniprot
Match: F0YCL1_AURAN (Sec16_C domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCL1_AURAN)

HSP 1 Score: 79.7 bits (195), Expect = 3.770e-16
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPN-RAPITDVAWNPDQGQHLVTGGRD 51
            +ATA+QNGS IVWDL+QKKPWCELRD + R+P++ VAWNP +G HL T   D
Sbjct:  197 LATASQNGSTIVWDLRQKKPWCELRDASFRSPVSAVAWNPAEGLHLATASGD 248          
BLAST of mRNA_Ecto-sp13_S_contig88535.20347.1 vs. uniprot
Match: A0A8K1FPX6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FPX6_PYTOL)

HSP 1 Score: 79.7 bits (195), Expect = 3.780e-16
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRAPITDVAWNPDQGQHLVTGGRD 51
            +AT +QNGS ++WDLKQKKPWCELRDP R  I+ +AWNP++G  + T   D
Sbjct:  197 LATGSQNGSVVIWDLKQKKPWCELRDPQRGTISAIAWNPNEGLQIATASGD 247          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig88535.20347.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCD9_9PHAE3.060e-2794.12WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LBR5_ECTSI3.060e-2794.12Vesicle coat complex COPII, subunit SEC31 n=1 Tax=... [more]
A0A7S3Y0U1_HETAK8.190e-2072.55Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2XZL8_9STRA2.110e-1968.63Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2GC77_9STRA2.280e-1768.09Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9D4C1_9STRA3.120e-1762.75WW domain-containing protein n=2 Tax=Monodopsidace... [more]
A0A482RVV6_9ARCH1.070e-1660.78Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A662WHK5_9STRA2.760e-1660.78Sec16_C domain-containing protein n=2 Tax=Nothophy... [more]
F0YCL1_AURAN3.770e-1665.38Sec16_C domain-containing protein (Fragment) n=1 T... [more]
A0A8K1FPX6_PYTOL3.780e-1658.82Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..51
e-value: 3.9E-10
score: 41.3
IPR040251Protein transport protein SEC31-likePANTHERPTHR13923SEC31-RELATED PROTEINcoord: 1..48
NoneNo IPR availablePANTHERPTHR13923:SF11SEC31 ORTHOLOG, ISOFORM Dcoord: 1..48
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 1..15
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..51
score: 11.629
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig88535contigEcto-sp13_S_contig88535:329..481 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig88535.20347.1mRNA_Ecto-sp13_S_contig88535.20347.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig88535 329..496 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig88535.20347.1 ID=prot_Ecto-sp13_S_contig88535.20347.1|Name=mRNA_Ecto-sp13_S_contig88535.20347.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=51bp
MATAAQNGSCIVWDLKQKKPWCELRDPNRAPITDVAWNPDQGQHLVTGGR
D
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR040251SEC31-like
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf