prot_Ecto-sp13_S_contig884.20329.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig884.20329.1
Unique Nameprot_Ecto-sp13_S_contig884.20329.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length84
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig884.20329.1 vs. uniprot
Match: A0A6H5KDX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX1_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 1.010e-13
Identity = 37/42 (88.10%), Postives = 37/42 (88.10%), Query Frame = 0 
Query:    1 GKYSEAEPLFKQTLAIYEKVLGPEHPDVALSLNNLAVFLEGQ 42
            GKYSEAEPLFKQT AIYEKVLGPEHP VA SLNN AVFLE Q
Sbjct:  160 GKYSEAEPLFKQTQAIYEKVLGPEHPHVAQSLNNPAVFLEDQ 201
[Close]
BLAST of mRNA_Ecto-sp13_S_contig884.20329.1 vs. uniprot
Match: A0A0J9EWN6_9CYAN (Kinesin (Fragment) n=1 Tax=Limnoraphis robusta CS-951 TaxID=1637645 RepID=A0A0J9EWN6_9CYAN)

HSP 1 Score: 63.2 bits (152), Expect = 7.600e-10
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 0 
Query:    1 GKYSEAEPLFKQTLAIYEKVLGPEHPDVALSLNNLAVFLEGQG 43
            G+Y+EAEPL++++LAI EKVLG  HPDVALSLNNLA F   QG
Sbjct:   20 GRYNEAEPLYQRSLAIREKVLGENHPDVALSLNNLASFYLSQG 62
[Close]
BLAST of mRNA_Ecto-sp13_S_contig884.20329.1 vs. uniprot
Match: A0A6M0ALV0_9CYAN (Tetratricopeptide repeat protein n=1 Tax=Moorena sp. SIO4G2 TaxID=2607820 RepID=A0A6M0ALV0_9CYAN)

HSP 1 Score: 58.9 bits (141), Expect = 1.290e-9
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0 
Query:    1 GKYSEAEPLFKQTLAIYEKVLGPEHPDVALSLNNLAVFLEGQG 43
            GKYSEA PL ++ L I +++LG EHPDVA+SLNNLA F E QG
Sbjct:   31 GKYSEAIPLAERALEIRQEILGEEHPDVAISLNNLAGFYESQG 73
[Close]
BLAST of mRNA_Ecto-sp13_S_contig884.20329.1 vs. uniprot
Match: A0A3E2H371_SCYLI (PNPLA domain-containing protein (Fragment) n=1 Tax=Scytalidium lignicola TaxID=5539 RepID=A0A3E2H371_SCYLI)

HSP 1 Score: 62.4 bits (150), Expect = 1.880e-9
Identity = 26/40 (65.00%), Postives = 36/40 (90.00%), Query Frame = 0 
Query:    1 GKYSEAEPLFKQTLAIYEKVLGPEHPDVALSLNNLAVFLE 40
            GKYSEAEP+++QTLA+ +KVLGPEHP+  +S+NNLA+ L+
Sbjct:  676 GKYSEAEPIYRQTLALRKKVLGPEHPNTLMSMNNLAMLLD 715
[Close]
BLAST of mRNA_Ecto-sp13_S_contig884.20329.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 2.620e-9
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 0 
Query:    1 GKYSEAEPLFKQTLAIYEKVLGPEHPDVALSLNNLAVFLE 40
            GKY+EAEPL++++LAI EKVLGPEHPDVA SL+N A  LE
Sbjct:  694 GKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLLE 733
[Close]
BLAST of mRNA_Ecto-sp13_S_contig884.20329.1 vs. uniprot
Match: A0A8J7LFL1_9NOST (Tetratricopeptide repeat-containing protein n=1 Tax=Dendronalium phyllosphericum CENA369 TaxID=1725256 RepID=A0A8J7LFL1_9NOST)

HSP 1 Score: 59.3 bits (142), Expect = 2.640e-9
Identity = 27/36 (75.00%), Postives = 32/36 (88.89%), Query Frame = 0 
Query:    1 GKYSEAEPLFKQTLAIYEKVLGPEHPDVALSLNNLA 36
            G+YSEAEPL+ Q LA++ K+LG EHPDVALSLNNLA
Sbjct:    3 GRYSEAEPLYIQALALWRKLLGEEHPDVALSLNNLA 38
[Close]
BLAST of mRNA_Ecto-sp13_S_contig884.20329.1 vs. uniprot
Match: A0A1U7N198_9CYAN (Uncharacterized protein n=3 Tax=Moorena TaxID=1155738 RepID=A0A1U7N198_9CYAN)

HSP 1 Score: 58.9 bits (141), Expect = 3.500e-9
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0 
Query:    1 GKYSEAEPLFKQTLAIYEKVLGPEHPDVALSLNNLAVFLEGQG 43
            GKYSEA PL ++ L I +++LG EHPDVA+SLNNLA F E QG
Sbjct:   75 GKYSEAIPLAERALEIRQEILGEEHPDVAISLNNLAGFYESQG 117
[Close]
BLAST of mRNA_Ecto-sp13_S_contig884.20329.1 vs. uniprot
Match: X0XF05_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0XF05_9ZZZZ)

HSP 1 Score: 60.8 bits (146), Expect = 3.650e-9
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 0 
Query:    1 GKYSEAEPLFKQTLAIYEKVLGPEHPDVALSLNNLAV 37
            G YS+AEPL+K+ LAI EK LGPEHPDVA SLNNLA+
Sbjct:    9 GDYSKAEPLYKRALAIMEKALGPEHPDVATSLNNLAL 45
[Close]
BLAST of mRNA_Ecto-sp13_S_contig884.20329.1 vs. uniprot
Match: A0A3M0WY91_9BACT (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A3M0WY91_9BACT)

HSP 1 Score: 59.3 bits (142), Expect = 4.200e-9
Identity = 27/37 (72.97%), Postives = 32/37 (86.49%), Query Frame = 0 
Query:    1 GKYSEAEPLFKQTLAIYEKVLGPEHPDVALSLNNLAV 37
            G Y +AEPL+K++L IYEK LG EHPDVALSLNNLA+
Sbjct:    6 GLYDKAEPLYKRSLEIYEKTLGQEHPDVALSLNNLAL 42
[Close]
BLAST of mRNA_Ecto-sp13_S_contig884.20329.1 vs. uniprot
Match: A0A2W4QJT5_9GAMM (Uncharacterized protein n=1 Tax=Candidatus Methylumidiphilus alinenensis TaxID=2202197 RepID=A0A2W4QJT5_9GAMM)

HSP 1 Score: 57.8 bits (138), Expect = 4.320e-9
Identity = 26/36 (72.22%), Postives = 32/36 (88.89%), Query Frame = 0 
Query:    1 GKYSEAEPLFKQTLAIYEKVLGPEHPDVALSLNNLA 36
            GKY+EAEPL++ +LAI EK LG +HPDVA+SLNNLA
Sbjct:    9 GKYAEAEPLYQSSLAIAEKALGKDHPDVAVSLNNLA 44
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig884.20329.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDX1_9PHAE1.010e-1388.10Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A0J9EWN6_9CYAN7.600e-1069.77Kinesin (Fragment) n=1 Tax=Limnoraphis robusta CS-... [more]
A0A6M0ALV0_9CYAN1.290e-965.12Tetratricopeptide repeat protein n=1 Tax=Moorena s... [more]
A0A3E2H371_SCYLI1.880e-965.00PNPLA domain-containing protein (Fragment) n=1 Tax... [more]
D7G722_ECTSI2.620e-972.50NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A8J7LFL1_9NOST2.640e-975.00Tetratricopeptide repeat-containing protein n=1 Ta... [more]
A0A1U7N198_9CYAN3.500e-965.12Uncharacterized protein n=3 Tax=Moorena TaxID=1155... [more]
X0XF05_9ZZZZ3.650e-975.68Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A3M0WY91_9BACT4.200e-972.97Tetratricopeptide repeat protein (Fragment) n=1 Ta... [more]
A0A2W4QJT5_9GAMM4.320e-972.22Uncharacterized protein n=1 Tax=Candidatus Methylu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 1..61
e-value: 2.4E-17
score: 63.0
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 1..78
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 1..78
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..84
e-value: 1.3E-34
score: 121.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..82
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..62
score: 10.44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig884contigEcto-sp13_S_contig884:17774..18336 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig884.20329.1mRNA_Ecto-sp13_S_contig884.20329.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig884 17773..18336 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig884.20329.1 ID=prot_Ecto-sp13_S_contig884.20329.1|Name=mRNA_Ecto-sp13_S_contig884.20329.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=84bp
GKYSEAEPLFKQTLAIYEKVLGPEHPDVALSLNNLAVFLEGQGKYSEAEP
LFEQSLTMREKMLGPEHPHVAYSLSNQARLLQRE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom