prot_Ecto-sp13_S_contig8803.20289.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8803.20289.1
Unique Nameprot_Ecto-sp13_S_contig8803.20289.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length399
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8803.20289.1 vs. uniprot
Match: D7FM28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM28_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 2.310e-60
Identity = 281/350 (80.29%), Postives = 290/350 (82.86%), Query Frame = 0 
Query:    1 APLLSQGGLGSAGLVRGGFKQRDNGLPKNGLYSYFVKPGHFKTTFADSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTGGGCEEGEKSKRKPQGTAVPSNGTASDGETPCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKKKSKSSAGRMGDEGTKSEASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKATEAVVEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGLCGNGVGDDEGGAQEGAVPKAKLGKKKKPKVGEAQAVEEEAAKSPGK 350
            AP  + GGLGSAGLV+GGFKQRDNGLPKNGLYSYFVKPGHFKTTFADSD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GVTG GCEEGEKS RKP GTAVPSNGTASDGETP                          XXXX                 PTKK   SSAG MGDEGTK+E S+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKAT+AVVEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNG+CGNGVGDD+GGAQEGAVPKAK GKKKKPKVG+A+AVEEEAAKSPGK
Sbjct:   17 APKGNHGGLGSAGLVKGGFKQRDNGLPKNGLYSYFVKPGHFKTTFADSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSE-GVTGEGCEEGEKSIRKPNGTAVPSNGTASDGETPRKKEKTKRKRAETPVAAVDGEGAKKTXXXXKMEEEAGIDQAGDASDVPTKKXXXSSAGGMGDEGTKNETSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKATDAVVEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGVCGNGVGDDKGGAQEGAVPKAKSGKKKKPKVGKAEAVEEEAAKSPGK 365
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BLAST of mRNA_Ecto-sp13_S_contig8803.20289.1 vs. uniprot
Match: A0A6H5L1A4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1A4_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 3.030e-45
Identity = 246/374 (65.78%), Postives = 257/374 (68.72%), Query Frame = 0 
Query:    1 APLLSQGGLGSAGLVRGGFKQRDNGLPKNGLYSYFVKPGHFKTTFADSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GVTGGGCEEGEKSKRKPQGTAVPSNGTASDGETPCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKKKSKS-------------------SAGRMGDEGTKSEASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKATEAVVEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGLCGNGVGDDEGGAQEGAVPKAKLGKKKKPKVGEAQAVEEEAAKSPGKS 351
            AP  + GGLGSAGLVRGGFKQRDNGLPKNGLYSYFVKPGHFKTTFADSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     GVTGGGCEEGEKSKRKPQGTA PSNGTASDGETP                      XXXXXXXXXX               PTK                          G++G+    + ++S  XXXXXXXXX                           GGKAT+AVVEK XXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXNG+CGNGVGDDEG AQEGAVPKAK GK KKPK G+A+AVEEEAAKSPGKS
Sbjct:   17 APKGNHGGLGSAGLVRGGFKQRDNGLPKNGLYSYFVKPGHFKTTFADSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSSQGVTGGGCEEGEKSKRKPQGTAAPSNGTASDGETP--RKEKTKRKRAGTSVAAMDGEXXXXXXXXXXMEEAGLDRAGDVSDVPTKXXXXXXXXXXXXXXXXXXXXXXXXERGKVGESAAANGSTSSEXXXXXXXXXKKKNIN---------------------GGKATDAVVEKXXXXXXXXXXXXXXXXXXXXXXXXRGKAREXXXXXXXXXXXNGVCGNGVGDDEGVAQEGAVPKAKSGKMKKPKFGKAEAVEEEAAKSPGKS 367
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BLAST of mRNA_Ecto-sp13_S_contig8803.20289.1 vs. uniprot
Match: A0A835ZCI6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCI6_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 8.920e-6
Identity = 29/43 (67.44%), Postives = 31/43 (72.09%), Query Frame = 0 
Query:    8 GLGSAGLVRG-GFKQRDNGLPKNGLYSYFVKPGHFKTTFADSD 49
            GLGS     G G   RDNGLPKNGLYS+FV+ GHFK  FADSD
Sbjct:   23 GLGSRSQTTGIGHAHRDNGLPKNGLYSFFVREGHFKKKFADSD 65
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8803.20289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FM28_ECTSI2.310e-6080.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1A4_9PHAE3.030e-4565.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZCI6_9STRA8.920e-667.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 70..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8803contigEcto-sp13_S_contig8803:3893..6262 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8803.20289.1mRNA_Ecto-sp13_S_contig8803.20289.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8803 3893..6262 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8803.20289.1 ID=prot_Ecto-sp13_S_contig8803.20289.1|Name=mRNA_Ecto-sp13_S_contig8803.20289.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=399bp
APLLSQGGLGSAGLVRGGFKQRDNGLPKNGLYSYFVKPGHFKTTFADSDD
DDDDDDDEKSGGSGDEKAKRKAAKKLKKREKKDAKKTKKRVKKEKAAAAA
AESSSEGVTGGGCEEGEKSKRKPQGTAVPSNGTASDGETPCKKEKTKRKR
AETSVAAVDGEGAKKTKKAKKMDEEAGLDRAGDASDVPTKKKSKSSAGRM
GDEGTKSEASSEKKKKKRGKVDEFAAANGSTSSEPSNTGGDTEKKKKKNG
GKATEAVVEKAANGTAQPSTSGGGGGTEKKKKKKGGKAREPAAEEAAIRT
ANGLCGNGVGDDEGGAQEGAVPKAKLGKKKKPKVGEAQAVEEEAAKSPGK
SNKKKKKSRGREDGDSEAAAAEGSGESKVKKAKKSKTKKKKAAGAAAA*
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